4CLL1 Antibody

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Description

Antibody Nomenclature and Validation

Antibody names typically reflect their target antigen or clinical purpose (e.g., anti-CD38 for daratumumab) . The designation "4CLL1" does not correspond to:

  • Known CLL-associated antigens: CD19, CD20, CD38, or BCMA .

  • Structural classifications: IgG subtypes (e.g., IgG1, IgG4) or bispecific formats (e.g., DuoBody-PD-L1×4-1BB) .

  • Clinical-stage compounds: Approved or experimental therapies for CLL (e.g., ibrutinib, venetoclax) .

Potential Sources of Confusion

The term "4CLL1" may arise from:

  • Typographical errors: Misrendering of "CLL1" (a hypothetical antigen) or "4-1BB" (a co-stimulatory receptor targeted in bispecific antibodies like GEN1046) .

  • Internal project codes: Proprietary identifiers from undisclosed preclinical research.

  • Misinterpretation of data: Incorrect association with studies on APRIL antagonistic antibodies (e.g., hAPRIL.01A) or anti-PD-1 Fc variants .

Relevant Antibody Classes in CLL Research

While "4CLL1" remains unverified, below are validated antibody targets in CLL therapy:

TargetExample AntibodyMechanism of ActionClinical Status
CD20RituximabB-cell depletion via ADCC/CDCApproved (1997)
CD52AlemtuzumabTargets T/B cells for complement-mediated lysisApproved (2001)
PD-1PembrolizumabImmune checkpoint blockadeInvestigational
BCMABelantamabTargets B-cell maturation antigenPhase II

Scientific and Clinical Implications

  • Antibody validation: Commercial antibodies require rigorous specificity testing to avoid batch-to-batch variability . No such data exists for "4CLL1."

  • Fc engineering: Fc-null or modified antibodies (e.g., anti-PD-1 mIgG1-N297A) show enhanced efficacy in CLL models by avoiding FcγR-mediated T-cell depletion .

  • Bispecific platforms: Antibodies like DuoBody-PD-L1×4-1BB (GEN1046) demonstrate synergy between PD-L1 blockade and 4-1BB agonism in preclinical studies .

Recommendations for Further Inquiry

  1. Verify nomenclature: Cross-reference "4CLL1" with institutional databases or proprietary pipelines.

  2. Explore analogous targets: Investigate APRIL/BAFF inhibitors (e.g., hAPRIL.01A) or Fc-optimized anti-CD20 antibodies .

  3. Consult regulatory filings: Search clinicaltrials.gov or EMA/FDA databases for unpublished codes.

Product Specs

Buffer
Preservative: 0.03% ProClin 300; Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
14-16 Weeks (Made-to-Order)
Synonyms
4CLL1 antibody; ACOS5 antibody; At1g62940 antibody; F16P17.94-coumarate--CoA ligase-like 1 antibody; EC 6.2.1.- antibody; 4-coumarate--CoA ligase isoform 10 antibody; At4CL10 antibody
Target Names
4CLL1
Uniprot No.

Target Background

Gene References Into Functions
PMID: 21393854, This study details the crystallization and X-ray analysis of the Arabidopsis thaliana 4-coumarate:CoA ligase., https://www.ncbi.nlm.nih.gov/pubmed/21393854, .
PMID: 19218397, ACOS5 encodes an enzyme involved in a conserved, ancient biochemical pathway essential for sporopollenin monomer biosynthesis., https://www.ncbi.nlm.nih.gov/pubmed/19218397, .
Database Links

KEGG: ath:AT1G62940

STRING: 3702.AT1G62940.1

UniGene: At.70358

Protein Families
ATP-dependent AMP-binding enzyme family
Subcellular Location
Endoplasmic reticulum.
Tissue Specificity
Mostly confined to anther tapetal cells.

Q&A

Basic Research Questions

How to validate 4CLL1 antibody specificity in myeloid leukemia cell lines?

Perform dual validation using:

  • Flow cytometry with CLL-1+ (THP-1, KG-1) vs CLL-1- cell lines (Raji, Jurkat)

  • Competitive ELISA with recombinant CLEC12A protein (25.6 kDa His-tag) at 1 μg/mL coating concentration

  • Knockout validation using CRISPR/Cas9-edited CLL-1- AML cell models

What controls are essential for CLL-1 immunohistochemistry in bone marrow samples?

Include:

  • Isotype-matched negative controls (IgG1 recommended )

  • Tissue microarrays with known CLL-1 expression gradients

  • Dual staining with CD34/CD38 for leukemic stem cell co-localization analysis

What concentration ranges optimize 4CLL1 antibody for functional assays?

Empirically determine using:

  • Titration series (0.1-10 μg/mL) in ADCC assays with NK-92 effector cells

  • EC50 calculation via SPR/BLI against recombinant CLL-1 (KD typically <1nM for therapeutic candidates )

Advanced Research Questions

How to resolve contradictory CLL-1 expression data between flow cytometry and RNA-seq?

Address through:

MethodApplicationCritical Parameters
Surface vs Total StainingDistinguish membrane vs intracellular pools0.25% saponin permeabilization
Post-translational Modification AnalysisGlycosylation impacts antibody bindingPNGase F treatment + Western blot
Single-Cell MultiomicsCorrelate protein/RNA at single-cell levelCITE-seq with 4CLL1 antibody barcoding

What experimental designs mitigate cross-reactivity with CLEC12A family members?

Implement:

  • Phage display mutagenesis to map critical epitope residues

  • Cross-species reactivity testing using murine CLL-1 homolog (30% sequence divergence )

  • Structural modeling of antibody-antigen interface (AF2-predicted complexes )

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