ABCA10 Antibody

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Description

ABCA10 Antibody Overview

ABCA10 antibodies are polyclonal or monoclonal reagents designed to detect the ABCA10 protein, encoded by the ABCA10 gene located on chromosome 17q24 . These antibodies are primarily used in Western Blot (WB) and ELISA to study ABCA10's expression, localization, and interaction networks .

ABCA10 Protein Structure and Function

ABCA10 is part of the ATP-binding cassette (ABC) transporter superfamily, which facilitates molecule transport across membranes . While its exact substrate is unknown, ABCA10 is implicated in:

  • Lipid homeostasis in macrophages .

  • Immune cell infiltration in tumor microenvironments .

  • Pathological staging of breast cancer (BRCA) .

Functional Domains

DomainRole
ATP-binding cassetteATP hydrolysis for transport activity
Transmembrane regionsSubstrate translocation

Table: ABCA10 Antibody Performance in BRCA Studies

Study FocusMethodKey OutcomeSource
Immune infiltrationTIMER 2.0ABCA10 linked to dendritic cell levels
Genetic alterationscBioPortal7% of BRCA tumors show ABCA10 mutations
Survival analysisKaplan-MeierLow ABCA10 → 5-year OS = 68% vs. 82%

Diagnostic Potential

  • ABCA10 promoter methylation and copy number variations may serve as epigenetic biomarkers for BRCA stratification .

Therapeutic Targets

  • Pharmacogenomic screens identify kinase inhibitors (e.g., dasatinib) as potential modulators of ABCA10 pathways .

Leading ABCA10 Antibodies

ProductSupplierClonalityApplicationsConcentration
STJ190575St John’s LabsPolyclonalWB, ELISA1 mg/mL
HPA014535Sigma-AldrichPolyclonalIHC (1:20–1:50)Not specified
MA5-21013InvitrogenMonoclonalWB, ELISANot specified

Validation Metrics

  • Specificity: Confirmed via peptide-blocking assays .

  • Reproducibility: Consistent results across TCGA and TIMER 2.0 datasets .

Future Research Directions

  • Mechanistic Studies: Clarify ABCA10’s role in lipid transport and immune evasion .

  • Therapeutic Trials: Test ABCA10-targeted therapies in BRCA xenograft models .

  • Antibody Optimization: Develop monoclonal antibodies for high-resolution imaging .

Product Specs

Buffer
Preservative: 0.03% ProClin 300; Constituents: 50% Glycerol, 0.01M Phosphate Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
14-16 week lead time (made-to-order)
Synonyms
ABCA10 antibody; ATH14 antibody; At5g61740 antibody; MAC9.5ABC transporter A family member 10 antibody; ABC transporter ABCA.10 antibody; AtABCA10 antibody; ABC2 homolog 14 antibody
Target Names
Uniprot No.

Target Background

Database Links

KEGG: ath:AT5G61740

UniGene: At.55670

Protein Families
ABC transporter superfamily, ABCA family, CPR flippase (TC 3.A.1.211) subfamily
Subcellular Location
Membrane; Multi-pass membrane protein.

Q&A

What types of ABCA10 antibodies are currently available for research applications?

Several types of ABCA10 antibodies are available for research purposes, varying in host, clonality, binding specificity, and conjugation:

Antibody TypeHostClonalityBinding RegionConjugationApplications
Anti-ABCA10 (C-Term)RabbitPolyclonalC-TerminalUnconjugatedWB
Anti-ABCA10RabbitPolyclonalVariousBiotinInquire
Anti-ABCA10 (AA 1-80)MouseMonoclonal (8F4)N-TerminalUnconjugatedELISA, WB
Anti-ABCA10 (Internal Region)RabbitPolyclonalInternalUnconjugatedELISA, WB
Anti-ABCA10 (Fluorophore-conjugated)RabbitPolyclonalVariousAlexa Fluor (488, 594, 647, etc.)Various

Researchers should select the appropriate antibody based on their specific experimental requirements, target epitope, and desired application.

What is the optimal protocol for using ABCA10 antibodies in Western blotting?

When performing Western blotting with ABCA10 antibodies, researchers should follow this optimized protocol:

  • Sample Preparation: Lyse cells or tissues in RIPA buffer supplemented with protease inhibitors. For ABCA10 detection, include phosphatase inhibitors as the protein may undergo post-translational modifications.

  • Protein Separation: Use 7-10% SDS-PAGE gels as ABCA10 is a relatively large protein. Load 30-50 μg of total protein per lane.

  • Transfer: For efficient transfer of large proteins, use wet transfer at 30V overnight at 4°C onto PVDF membrane.

  • Blocking: Block with 5% non-fat dry milk in TBST for 1 hour at room temperature.

  • Primary Antibody Incubation: Dilute ABCA10 antibody (such as the C-terminal specific antibody ) at 1:500-1:1000 in blocking buffer. Incubate overnight at 4°C with gentle rocking.

  • Secondary Antibody: Use appropriate HRP-conjugated secondary antibody (anti-rabbit for most ABCA10 antibodies ) at 1:2000-1:5000 dilution for 1 hour at room temperature.

  • Detection: Develop using enhanced chemiluminescence reagents and document using a digital imaging system.

  • Controls: Include positive control (tissue/cells known to express ABCA10) and negative control (ABCA10 knockout cells if available).

How should I optimize immunohistochemistry protocols for ABCA10 detection?

For optimal immunohistochemical detection of ABCA10:

  • Tissue Preparation: Fix tissues in 10% neutral buffered formalin for 24-48 hours before paraffin embedding. Cut sections at 4-5 μm thickness.

  • Antigen Retrieval: Perform heat-induced epitope retrieval using citrate buffer (pH 6.0) for 20 minutes.

  • Blocking: Block endogenous peroxidase with 3% H₂O₂ for 10 minutes, followed by protein blocking with 5% normal serum.

  • Antibody Optimization:

    • Perform a titration series (1:100, 1:200, 1:500, 1:1000) with your ABCA10 antibody

    • Test multiple antibodies targeting different epitopes if available

    • Consider using polyclonal rabbit anti-ABCA10 antibodies which have shown reactivity in human samples

  • Validation: Use tissue microarrays containing multiple tissue types to validate expression patterns across tissues and compare with literature reports on ABCA10 expression .

  • Controls: Include positive controls (tissues known to express ABCA10) and negative controls (primary antibody omission and ideally tissue from ABCA10 knockout models).

How can I validate the specificity of my ABCA10 antibody?

Antibody validation is crucial for ensuring experimental reliability. For ABCA10 antibodies, consider these approaches:

  • Multiple Antibody Comparison: Test different antibodies targeting distinct epitopes of ABCA10 (e.g., C-terminal vs. internal region ) and compare staining patterns.

  • Peptide Competition: Pre-incubate the antibody with the immunizing peptide (such as the C-terminal peptide sequence "HEIFENEINP EHSSDDSFEP VSPEFHGKEA IRIRNVIKEY NGKTGKVEAL" ) to block specific binding.

  • Genetic Models: If available, test the antibody in ABCA10 knockout or knockdown systems. While ABCA1 knockout cell validation is mentioned in the search results , similar approaches should be applied for ABCA10.

  • Molecular Weight Confirmation: Ensure the detected protein band appears at the expected molecular weight for ABCA10.

  • Cross-Reactivity Testing: Check for reactivity against related proteins in the ABC transporter family, particularly other ABCA subfamily members, to confirm specificity.

  • Immunoprecipitation-Mass Spectrometry: Perform IP with the ABCA10 antibody followed by mass spectrometry to confirm capture of the intended target.

What are common issues when working with ABCA10 antibodies and their solutions?

Researchers frequently encounter these challenges when using ABCA10 antibodies:

IssuePossible CausesSolutions
Weak or no signalLow protein expression, ineffective antibodyUse tissues with higher expression; increase antibody concentration; try different antibody clones; optimize antigen retrieval
Multiple bands in Western blotCross-reactivity, protein degradationValidate with peptide competition; use fresh samples with protease inhibitors; try different antibody with higher specificity
Background staining in IHCNon-specific binding, inadequate blockingIncrease blocking time/concentration; titrate antibody; use more stringent washing; try a more specific antibody
Inconsistent resultsLot-to-lot antibody variationUse same lot for critical experiments; validate each new lot against previous results
Poor reproducibilityProtocol variationsStandardize all experimental conditions; document precise protocols

How can ABCA10 antibodies contribute to cancer research, particularly in breast cancer studies?

ABCA10 antibodies are valuable tools for investigating the role of this protein in cancer:

What approaches can be used to study ABCA10's subcellular localization and trafficking?

Understanding ABCA10's localization is key to elucidating its function:

  • Immunofluorescence Microscopy: Using fluorophore-conjugated ABCA10 antibodies (such as Alexa Fluor 488, 594, or 647 conjugates ) for high-resolution imaging of ABCA10 distribution.

  • Co-localization Studies: Combining ABCA10 antibodies with markers for cellular compartments (plasma membrane, endosomes, Golgi, etc.) to determine its predominant localization.

  • Live Cell Imaging: Tracking dynamics using cell-permeable antibody fragments or fluorescently-tagged ABCA10.

  • Subcellular Fractionation: Using ABCA10 antibodies to analyze protein distribution across different cellular compartments after biochemical separation.

  • Electron Microscopy: Immunogold labeling with ABCA10 antibodies for ultrastructural localization.

How does ABCA10 expression and function compare to other ABCA family members?

ABCA10 is one member of the larger ABCA subfamily, which includes better-characterized transporters like ABCA1:

  • Comparative Expression Analysis: Unlike ABCA1, which has well-documented roles in phospholipid transport and HDL formation , ABCA10's expression patterns and functional significance remain less characterized. Research suggests its expression may be tissue-specific.

  • Structural and Functional Homology: ABCA10 likely shares structural features with other ABCA transporters, including ATP-binding domains and transmembrane regions, but may have distinct substrate specificity.

  • Regulatory Mechanisms: Studies comparing the regulation of ABCA10 with other ABCA family members could reveal whether they share common transcriptional control mechanisms or respond to similar cellular stimuli.

  • Disease Associations: While ABCA1 has established roles in cholesterol metabolism disorders , ABCA10's association with breast cancer prognosis suggests potentially different pathophysiological relevance.

  • Comparative Knockout Studies: Generating and comparing phenotypes of cells lacking different ABCA transporters could reveal unique and overlapping functions within this family.

What emerging technologies might enhance ABCA10 antibody applications in research?

Several cutting-edge approaches could advance ABCA10 research:

  • Super-Resolution Microscopy: Techniques like STORM and PALM combined with highly specific ABCA10 antibodies could reveal detailed subcellular localization patterns beyond the diffraction limit.

  • Proximity Labeling: BioID or APEX2 fusions with ABCA10 coupled with antibody-based detection could map the protein's interaction neighborhood.

  • Single-Cell Analysis: ABCA10 antibodies optimized for mass cytometry (CyTOF) or imaging mass cytometry could examine heterogeneity of expression at the single-cell level.

  • Cryo-EM Structure Determination: Antibody fragments could facilitate structural studies of ABCA10, revealing its molecular architecture and substrate binding sites.

  • Multiplex Imaging: Combining ABCA10 antibodies with other markers in multiplex immunofluorescence or imaging mass cytometry could provide contextual information about its expression in complex tissues.

How can ABCA10 antibodies be used to investigate its potential role in drug resistance mechanisms?

Given that ABC transporters often contribute to drug resistance phenotypes:

  • Expression Correlation: ABCA10 antibodies can be used to assess whether its expression levels correlate with resistance to specific therapeutic agents in cancer cell lines and patient samples.

  • Functional Modulation: Antibodies that recognize extracellular domains of ABCA10 might be used to modulate its transport function in live cells, potentially altering drug sensitivity.

  • Drug Transport Studies: Combining ABCA10 antibody-based detection with fluorescent substrate accumulation assays could determine whether ABCA10 transports specific drug compounds.

  • Resistance Mechanism Investigations: Immunoprecipitation using ABCA10 antibodies followed by proteomic analysis might reveal partners involved in drug resistance pathways.

  • Predictive Biomarker Development: If ABCA10 expression proves relevant to treatment outcomes, antibody-based assays could be developed as companion diagnostics for guiding therapy selection.

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