ADNP Antibody, FITC conjugated

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Description

Definition and Overview of ADNP Antibody, FITC Conjugated

ADNP (Activity-dependent neuroprotector homeobox) is a multifunctional protein critical for neurodevelopment, chromatin remodeling, and immune regulation. The FITC (fluorescein isothiocyanate)-conjugated ADNP antibody is a fluorescently labeled reagent designed to detect ADNP in research applications such as flow cytometry, immunofluorescence, and functional assays. FITC enables visualization of antibody-antigen binding via green fluorescence emission (495 nm excitation, 519 nm emission) .

Immunofluorescence and Cellular Localization

  • Detects intracellular ADNP in immune cells (monocytes, T cells) and neuronal tissues .

  • Validated in NIH/3T3 cells, showing nuclear localization .

Functional Assays

  • Antibody-dependent neutrophil phagocytosis (ADNP): Quantifies phagocytic activity using FITC-conjugated beads and flow cytometry. Phagocytic scores integrate fluorescence intensity and cell uptake .

  • Disease studies: Used to analyze ADNP expression in multiple sclerosis (MS), where reduced ADNP levels correlate with disease progression .

Protein Interaction Studies

  • Co-immunoprecipitation (Co-IP) confirms ADNP’s role in chromatin remodeling complexes .

Research Findings Using ADNP Antibody, FITC Conjugated

StudyKey InsightSource
NeuroimmunologyADNP suppression in MS patients’ blood correlates with T-cell dysregulation .
Infectious DiseaseFc-engineered antibodies enhance ADNP activity against Mycobacterium tuberculosis .
Genetic DisordersTruncated ADNP mutants (e.g., p.Pro403*) show altered molecular weights in CRISPR-edited cells .
Vaccine DevelopmentVi-TCV vaccine-induced IgG sialylation modulates ADNP efficacy in typhoid studies .

Validation and Quality Control

  • Specificity: Knockdown experiments (siRNA) reduce ADNP signal by >80% .

  • Western blot: Detects ADNP at ~150 kDa (higher than theoretical 124 kDa due to post-translational modifications) .

  • Cross-reactivity: Validated in human and mouse models .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Typically, we can ship the products within 1-3 business days after receiving your order. Delivery timelines may vary depending on the purchase method and location. Please consult your local distributor for specific delivery details.
Synonyms
Activity dependent neuroprotective protein antibody; Activity dependent neuroprotector antibody; Activity-dependent neuroprotective protein antibody; Activity-dependent neuroprotector homeobox protein antibody; Adnp antibody; ADNP_HUMAN antibody; KIAA0784 antibody
Target Names
Uniprot No.

Target Background

Function
ADNP (Activity-dependent neuroprotective protein) is a potential transcription factor. It may mediate some of the neuroprotective peptide VIP-associated effects involving normal growth and cancer proliferation.
Gene References Into Functions
  1. Individuals presenting with intellectual disability, autism spectrum disorder, and features suggestive of Noonan syndrome should undergo DNA analysis for the ADNP gene if the Noonan syndrome panel fails to identify a specific mutation. PMID: 29424797
  2. The role of ADNP in autophagy, and in autism, schizophrenia, and Alzheimer's disease is described. PMID: 28940660
  3. Our research indicates that ADNP acts as a tumor suppressor and is a promising prognostic marker. Ketamine treatment with ADNP induction holds potential as a therapeutic approach that may complement current treatment protocols for colorectal cancer patients. PMID: 27903678
  4. From a clinical perspective, the differential diagnosis of patients with blepharophimosis should include ADNP mutations, in addition to blepharophimosis ptosis epicanthus inversus syndrome, especially when intellectual disability is present. PMID: 28407407
  5. Parents of 44 out of 54 children with ADNP mutations reported an almost complete eruption of dentition by the age of one year, including molars. Only 10 of these children exhibited teeth within the normal developmental timeframe. PMID: 28221363
  6. SHANK3, CHD8, and ADNP had significantly higher scores than all other genes in the dataset describing genes associated with autism spectrum disorders. PMID: 27790361
  7. The study identified intratumoral heterogeneity (ITH) of ADNP mutations in colorectal cancers, suggesting that these mutations occur during tumor progression rather than as an early event. The generation of ITH may influence the clinical outcome of cancer patients. PMID: 27308845
  8. These findings demonstrate that the down-regulation of the ADNP protein is an early pathological alteration and may contribute to dopaminergic neurodegeneration in Parkinson's disease. PMID: 27003787
  9. This review explores the diverse and crucial ADNP-protein interactions and provides insights into their potential significance in autism, schizophrenia, and Alzheimer's disease. [review] PMID: 25955282
  10. ADNP expression was elevated in male hippocampal samples compared to female samples. PMID: 25646590
  11. Mutations in the ADNP gene cause syndromic autism. Extensive evidence suggests that ADNP is critically important for the proper functioning of the nBAF complex. PMID: 25169753
  12. This study demonstrated that ADNP is deregulated in postmortem hippocampal samples from schizophrenia patients, but a significantly increased expression was observed in lymphocytes from related patients. PMID: 24365867
  13. Ten patients with autism spectrum disorders and other shared clinical features, including intellectual disability and facial dysmorphisms, were identified with a mutation in ADNP, a transcription factor involved in the SWI/SNF remodeling complex. PMID: 24531329
  14. Chromatin immunoprecipitation demonstrates the ability of ADNP to bind to its own promoter, consistent with its role as a repressor of both promoter-supported and endogenous ADNP expression. PMID: 21647709
  15. Our findings suggest that ADNP may play a significant role in slowing the progression of clinical symptoms associated with Alzheimer's disease. PMID: 22554909
  16. ADNP is expressed in numerous immune system cells. ADNP mRNA levels are reduced in PBMCs in multiple sclerosis. The peptide NAP, which plays a crucial role in neuroprotection, possesses potential immunomodulatory properties. PMID: 19923857
  17. Activity-dependent neuroprotective protein constitutes a novel element within the SWI/SNF chromatin remodeling complex. PMID: 17878164

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Database Links

HGNC: 15766

OMIM: 611386

KEGG: hsa:23394

STRING: 9606.ENSP00000342905

UniGene: Hs.293736

Involvement In Disease
Helsmoortel-van der Aa syndrome (HVDAS)
Subcellular Location
Nucleus.
Tissue Specificity
Widely expressed. Strong expression in heart, skeletal muscle, kidney and placenta. In brain, expression is stronger in the cerebellum and cortex regions. No expression detected in the colon. Strong increase of expression in colon and breast cancer tissue

Q&A

What is ADNP and why are FITC-conjugated antibodies useful for its detection?

ADNP (Activity-Dependent Neuroprotector Homeobox) is a critical protein involved in brain development and neuroprotection. FITC-conjugated ADNP antibodies provide direct fluorescent visualization without requiring secondary antibodies, simplifying experimental workflows and reducing background noise. The FITC (Fluorescein isothiocyanate) conjugate has an excitation maximum at 495 nm and emission maximum at 519 nm, providing bright green fluorescence in immunofluorescence applications . These antibodies are particularly valuable for multi-color immunofluorescence experiments where direct detection eliminates potential cross-reactivity issues.

What are the primary applications for ADNP antibodies with FITC conjugation?

ADNP antibodies with FITC conjugation can be utilized across several experimental approaches:

  • Immunocytochemistry/Immunofluorescence: Direct visualization of ADNP protein in cellular contexts

  • Western Blotting: Detection of ADNP protein in cell or tissue lysates

  • ELISA: Quantification of ADNP levels in various samples

  • Immunoprecipitation: Isolation of ADNP and associated protein complexes

The choice of application should be guided by experimental goals and the specific properties of the antibody, with optimal dilutions determined empirically for each application and experimental system.

What are the key specifications to consider when selecting an ADNP-FITC antibody?

When selecting an ADNP antibody with FITC conjugation, researchers should consider:

SpecificationDescriptionImportance
Binding SpecificityTarget epitope (e.g., AA 702-731, AA 867-1102)Determines what region of ADNP is recognized
Host SpeciesTypically rabbit for polyclonal optionsAffects compatibility with other reagents
ClonalityPredominantly polyclonalInfluences specificity and application versatility
ReactivitySpecies compatibility (human, mouse, etc.)Ensures compatibility with experimental model
IsotypeUsually IgGImportant for certain applications
Purification MethodAffinity or protein G purificationImpacts antibody quality and specificity

Researchers should select antibodies that have been validated for their specific application and experimental model to ensure reliable results.

How should ADNP-FITC conjugated antibodies be stored to maintain optimal activity?

ADNP antibodies with FITC conjugation should be stored at 4°C in the dark to preserve fluorescence activity . FITC is particularly sensitive to photobleaching, so minimizing light exposure during storage and handling is critical. Most manufacturers recommend avoiding freeze-thaw cycles as they can compromise antibody performance. When working with these reagents:

  • Store in single-use aliquots to minimize freeze-thaw cycles

  • Protect from prolonged light exposure during experiments

  • Follow manufacturer's specific storage recommendations for concentration and buffer conditions

  • Monitor for signs of photobleaching or decreased signal over time

Proper storage significantly impacts experimental reproducibility and signal intensity.

What are the optimal fixation and permeabilization conditions for ADNP immunocytochemistry using FITC-conjugated antibodies?

Optimizing fixation and permeabilization protocols is critical for successful ADNP detection. Based on research practices with FITC-conjugated antibodies:

Recommended Fixation Protocol:

  • Fix cells with 4% paraformaldehyde for 15-20 minutes at room temperature

  • Wash 3× with PBS to remove excess fixative

  • Permeabilize with 0.1-0.3% Triton X-100 for 10 minutes

  • Block with 5% normal serum (matching secondary antibody host if using unconjugated primaries)

  • Apply FITC-conjugated ADNP antibody at empirically determined dilution

  • Incubate overnight at 4°C in a humidified chamber protected from light

  • Wash thoroughly to reduce background

  • Mount with anti-fade medium containing DAPI for nuclear counterstaining

These conditions preserve ADNP epitopes while maintaining cellular architecture. For nuclear ADNP detection, ensure complete nuclear permeabilization. Alternative fixatives such as methanol may be tested if paraformaldehyde yields suboptimal results, though this should be empirically determined for each antibody.

How can researchers troubleshoot weak or nonspecific signals when using FITC-conjugated ADNP antibodies?

When encountering weak or nonspecific signals with FITC-conjugated ADNP antibodies, systematic troubleshooting is essential:

For Weak Signals:

  • Increase antibody concentration incrementally (starting with manufacturer recommendations)

  • Extend incubation time to overnight at 4°C

  • Optimize antigen retrieval methods if using fixed tissues

  • Reduce washing stringency while maintaining sufficient steps to remove unbound antibody

  • Ensure sample preparation preserves the epitope recognized by the antibody

For Nonspecific Signals:

  • Increase blocking time and concentration (5-10% normal serum)

  • Add 0.1-0.3% BSA to antibody dilution buffer

  • Use more stringent washing conditions (higher salt concentration in PBS)

  • Pre-adsorb the antibody with non-specific proteins

  • Include appropriate negative controls (non-immune rabbit IgG-FITC)

  • Reduce antibody concentration

For both issues, evaluate fixation methods as overfixation can mask epitopes while underfixation may cause structural deterioration.

What are the advantages and limitations of using directly conjugated ADNP-FITC antibodies compared to unconjugated primary antibodies in multi-labeling experiments?

Advantages:

Limitations:

  • No signal amplification compared to secondary antibody detection methods

  • Limited flexibility in fluorophore selection once conjugated

  • Potential reduced sensitivity compared to tyramide signal amplification methods

  • Higher cost compared to unconjugated primary + secondary approach

  • Shorter shelf-life due to photobleaching concerns of conjugated fluorophore

For multi-labeling experiments specifically targeting ADNP alongside other proteins, researchers should carefully plan fluorophore combinations to avoid spectral overlap. When using ADNP-FITC antibodies (excitation 495 nm, emission 519 nm) , pair with fluorophores having minimal spectral overlap, such as those in the far-red range.

How can researchers quantify ADNP expression levels using FITC-conjugated antibodies in flow cytometry?

Quantifying ADNP expression via flow cytometry with FITC-conjugated antibodies requires careful experimental design:

Recommended Protocol:

  • Prepare single-cell suspensions from your samples

  • Fix cells with 2-4% paraformaldehyde for 15 minutes at room temperature

  • Permeabilize with 0.1% saponin or 0.1% Triton X-100 in PBS

  • Block with 2% BSA in PBS for 30 minutes

  • Incubate with ADNP-FITC antibody at optimized concentration for 1 hour at room temperature in the dark

  • Wash three times with PBS containing 0.1% of the permeabilization agent

  • Analyze by flow cytometry using appropriate compensation controls

Analysis Considerations:

  • Include unstained and isotype controls (rabbit IgG-FITC)

  • Use median fluorescence intensity (MFI) rather than mean for more robust quantification

  • Consider using fluorescent calibration beads to standardize across experiments

  • For multi-parameter analysis, include fluorescence minus one (FMO) controls

  • Analyze at least 10,000 events per sample for statistical reliability

This approach allows for quantitative assessment of ADNP expression across different experimental conditions or cell populations.

What controls are essential when using ADNP-FITC antibodies for immunofluorescence studies?

Robust experimental design requires appropriate controls to validate ADNP-FITC antibody specificity and performance:

Essential Controls:

Control TypePurposeImplementation
Negative ControlsAssess non-specific bindingInclude no-primary-antibody control and isotype-matched IgG-FITC control
Positive ControlsConfirm detection system worksUse tissues/cells known to express ADNP (e.g., neuronal cell lines)
Absorption ControlsVerify antibody specificityPre-incubate antibody with immunizing peptide before staining
CounterstainingProvide cellular contextInclude nuclear stain (DAPI) and cellular marker (e.g., β-tubulin)
Blocking PeptideConfirm epitope specificityCompare staining with and without competing peptide

Additionally, when examining ADNP expression in experimental manipulations, include appropriate biological controls that represent baseline conditions. Document acquisition parameters consistently across all samples and controls to enable valid comparisons.

How do different fixation methods affect the detection of ADNP using FITC-conjugated antibodies?

Fixation methods significantly impact ADNP epitope accessibility and antibody binding:

Comparison of Fixation Methods:

Fixation MethodImpact on ADNP DetectionRecommended Applications
4% ParaformaldehydePreserves most epitopes; maintains morphologyStandard approach for most applications
MethanolMay expose some epitopes hidden by cross-linking fixativesAlternative when paraformaldehyde fails
AcetoneRapid fixation; may preserve some conformational epitopesQuick fixation for certain cell types
GlutaraldehydeStrong cross-linking; may mask epitopesNot typically recommended for ADNP detection
Heat-mediated antigen retrievalCan restore epitopes masked by fixationMay be necessary for certain tissue preparations

The specific ADNP epitope targeted by the antibody influences fixation compatibility. For antibodies targeting amino acids 702-731 or 867-1102 , paraformaldehyde fixation generally provides reliable results, but optimization may be required for specific experimental systems.

What approaches can be used to validate ADNP-FITC antibody specificity in research applications?

Validating antibody specificity is crucial for generating reliable scientific data. For ADNP-FITC antibodies, consider these complementary approaches:

  • Western blot analysis: Confirm the antibody detects a band of the expected molecular weight (~124 kDa for full-length ADNP)

  • RNA interference: Compare antibody staining in cells with normal versus reduced ADNP expression via siRNA knockdown

  • Genetic models: Use ADNP knockout or overexpression systems to verify proportional signal changes

  • Peptide competition: Pre-incubate antibody with the immunizing peptide before staining to block specific binding

  • Multi-antibody validation: Compare staining patterns with antibodies targeting different ADNP epitopes

  • Mass spectrometry validation: Confirm identity of immunoprecipitated proteins using LC-MS/MS

  • Cross-reactivity testing: Verify species specificity matches manufacturer claims for human or mouse reactivity

Implementing multiple validation approaches provides stronger evidence for antibody specificity than any single method alone.

How can researchers integrate ADNP-FITC antibody data with other experimental methodologies for comprehensive analysis?

Integrating ADNP detection with complementary methodologies enhances research depth:

Multimodal Research Approaches:

  • Correlative microscopy: Combine immunofluorescence with electron microscopy to link ADNP localization with ultrastructural features

  • Functional assays: Pair ADNP immunodetection with electrophysiology in neuronal cultures to correlate expression with functional outcomes

  • Transcriptomic integration: Compare ADNP protein levels with mRNA expression using RT-qPCR or RNA-seq

  • Co-immunoprecipitation studies: Use ADNP antibodies for immunoprecipitation followed by mass spectrometry to identify interaction partners

  • ChIP-seq analysis: For nuclear ADNP, combine with chromatin immunoprecipitation to identify DNA binding sites

  • Live imaging: Complement fixed-cell ADNP-FITC studies with live-cell imaging using fluorescent protein-tagged ADNP

  • Multiplexed detection: Implement techniques like imaging mass cytometry or cyclic immunofluorescence for highly multiplexed protein detection including ADNP

Each approach provides distinct but complementary information that, when integrated, offers a more complete understanding of ADNP biology in the experimental system.

What is the significance of epitope selection in ADNP-FITC antibody performance across different applications?

The epitope recognized by ADNP antibodies significantly influences their utility across applications. Available FITC-conjugated ADNP antibodies target distinct regions:

  • AA 702-731 (Central region)

  • AA 867-1102 (C-terminal region)

Epitope Considerations:

  • Structural accessibility: C-terminal epitopes may be more accessible in native proteins, while internal epitopes might require denaturation for optimal detection

  • Post-translational modifications: Modifications near the epitope may alter antibody binding; central and C-terminal ADNP regions contain multiple phosphorylation sites

  • Protein interactions: Epitopes involved in protein-protein interactions may be masked in certain cellular contexts

  • Processing variants: ADNP undergoes proteolytic processing; antibodies targeting different regions may detect distinct forms

  • Cross-reactivity: Epitope conservation across species determines cross-reactivity potential; the AA 702-731 epitope shows reactivity with mouse ADNP , while the AA 867-1102 epitope is human-specific

Understanding the specific epitope recognized helps predict antibody performance across applications and experimental conditions.

How can researchers optimize ADNP-FITC antibody dilutions for maximum signal-to-noise ratio?

Optimizing antibody dilutions is critical for balancing specific signal detection with background minimization:

Systematic Optimization Protocol:

  • Titration series: Prepare a geometric dilution series (e.g., 1:50, 1:100, 1:200, 1:400) based on manufacturer recommendations

  • Control inclusion: For each dilution, include appropriate negative controls to assess background

  • Quantitative assessment: Calculate signal-to-noise ratio by dividing specific signal intensity by background signal

  • Visual evaluation: Assess staining pattern clarity and background across dilutions

  • Replicate testing: Confirm optimal dilution across multiple samples and experimental days

  • Batch testing: When receiving new antibody lots, perform abbreviated titration to confirm optimal dilution

For most applications, manufacturers suggest starting with ELISA or Western blotting to establish basic reactivity before proceeding to more complex applications like immunocytochemistry .

What are the methodological considerations for using ADNP-FITC antibodies in high-resolution imaging techniques?

When employing ADNP-FITC antibodies for high-resolution microscopy techniques:

Super-Resolution Considerations:

  • Photobleaching mitigation: FITC is prone to photobleaching; use anti-fade mounting media containing oxygen scavengers

  • Sample preparation: For techniques like STED or STORM, optimize fixation to minimize sample movement and autofluorescence

  • Labeling density: For single-molecule localization microscopy, adjust antibody concentration to achieve appropriate labeling density

  • Buffer conditions: For techniques requiring specific imaging buffers, test FITC signal stability in these conditions

  • Chromatic aberration: When combining with other fluorophores, implement chromatic aberration correction

  • Reference standards: Include fluorescent beads as fiducial markers for drift correction and channel alignment

  • Quantitative imaging: For intensity-based comparisons, include calibration standards and maintain consistent acquisition parameters

For optimal results in techniques like structured illumination microscopy (SIM) or stimulated emission depletion (STED) microscopy, sample preparation quality is paramount to achieving the theoretical resolution limits of these techniques.

What strategies can address potential cross-reactivity between ADNP and ADNP2 in experimental systems?

ADNP and ADNP2 (ADNP Homeobox 2) share significant sequence homology, creating potential cross-reactivity challenges:

Strategies to Ensure Specificity:

  • Epitope selection: Choose antibodies targeting regions with minimal homology between ADNP and ADNP2; the central region (AA 702-731) shows less conservation than homeobox domains

  • Validation in knockout systems: Test antibody specificity in ADNP or ADNP2 knockout cells

  • Competitive blocking: Use recombinant proteins or peptides corresponding to ADNP2 to pre-absorb potential cross-reactive antibodies

  • Western blot verification: Confirm the detected band matches the expected molecular weight difference between ADNP (~124 kDa) and ADNP2 (~114 kDa)

  • Parallel detection: Use antibodies specifically targeting unique regions of each protein as comparative controls

  • Mass spectrometry validation: Confirm the identity of immunoprecipitated proteins by peptide mass fingerprinting

  • siRNA knockdown: Perform selective knockdown of either ADNP or ADNP2 to verify antibody specificity

Careful attention to these specificity considerations is essential for accurate interpretation of experimental results, particularly in systems where both proteins may be expressed.

How can ADNP-FITC antibodies be incorporated into antibody-dependent neutrophil phagocytosis (ADNP) assays?

Integrating ADNP Protein Detection with Neutrophil Function Assays:

  • Dual-purpose experiment design: Combine neutrophil functional assays with ADNP protein detection using FITC-conjugated antibodies

  • Flow cytometry adaptation: Modify the high-throughput ADNP assay described in the literature to include ADNP protein detection in specific neutrophil subpopulations

  • Neutrophil activation markers: Pair ADNP protein detection with neutrophil activation markers to correlate expression with functional state

  • Stimulation responses: Monitor changes in ADNP protein levels following various immune stimuli used in neutrophil functional assays

  • Live-cell imaging: Track ADNP localization during neutrophil phagocytosis using membrane-permeable fluorescent ADNP-binding peptides

This cross-disciplinary approach could reveal potential relationships between ADNP protein expression and neutrophil function in various physiological and pathological contexts.

What are the considerations for multiplexed detection of ADNP with other biomarkers using FITC and complementary fluorophores?

Multiplexed detection requires careful planning of fluorophore combinations to avoid spectral overlap:

Multiplex Optimization Strategies:

  • Spectral compatibility: FITC (excitation 495 nm, emission 519 nm) pairs well with fluorophores emitting in far-red or near-infrared ranges

  • Recommended fluorophore combinations:

    • FITC (ADNP) + TRITC/Cy3 + Cy5 + DAPI

    • FITC (ADNP) + PE + APC + DAPI

  • Signal balancing: Adjust antibody concentrations to achieve comparable signal intensities across channels

  • Sequential detection: For challenging combinations, implement sequential detection protocols with antibody stripping between rounds

  • Spectral unmixing: For confocal microscopy with significant overlap, utilize spectral unmixing algorithms

  • Control samples: Prepare single-color controls for each fluorophore to establish compensation parameters

  • Antibody selection: Choose primary antibodies from different host species to avoid cross-reactivity of secondary antibodies

Proper planning of multiplexed experiments enhances data quality while maximizing information obtained from limited samples.

How should researchers approach quantification of ADNP expression using FITC-conjugated antibodies?

Quantitative analysis of ADNP expression requires rigorous methodological approaches:

Quantification Methodologies:

  • Fluorescence intensity measurement:

    • Measure integrated or mean fluorescence intensity within defined regions of interest

    • Apply background subtraction using adjacent negative regions

    • Report relative rather than absolute values unless using calibration standards

  • Expression pattern analysis:

    • Quantify nuclear vs. cytoplasmic localization ratio

    • Measure colocalization with other markers using Pearson's or Mander's coefficients

    • Analyze distribution patterns using intensity line profiles

  • Population analysis:

    • In flow cytometry, report percentage of positive cells and median fluorescence intensity

    • For tissue sections, quantify percentage of positive cells per defined area

    • Consider cell-by-cell analysis rather than whole-field averaging

  • Standardization approaches:

    • Include fluorescent calibration standards in each experiment

    • Normalize to housekeeping proteins when appropriate

    • Maintain identical acquisition settings across all compared samples

What statistical approaches are most appropriate for analyzing ADNP expression data across experimental conditions?

Statistical Analysis Framework:

  • Experiment design considerations:

    • A priori power analysis to determine required sample size

    • Randomization and blinding procedures to minimize bias

    • Inclusion of appropriate positive and negative controls

  • Data normality assessment:

    • Shapiro-Wilk or Kolmogorov-Smirnov tests to determine distribution

    • Q-Q plots for visual assessment of normality

    • Consider log-transformation for skewed distributions

  • Comparative statistics:

    • For two groups: t-test (parametric) or Mann-Whitney U test (non-parametric)

    • For multiple groups: ANOVA with post-hoc tests (parametric) or Kruskal-Wallis with post-hoc tests (non-parametric)

    • For repeated measures: Repeated measures ANOVA or mixed-effects models

  • Correlation analyses:

    • Pearson correlation for linear relationships in normally distributed data

    • Spearman correlation for non-parametric data or non-linear relationships

    • Multiple regression for complex relationships with potential confounding variables

  • Advanced approaches:

    • Cluster analysis for identifying expression patterns

    • Machine learning for complex pattern recognition in large datasets

    • Bayesian methods for integrating prior knowledge with experimental data

Transparent reporting of all statistical methods, including specific tests, significance thresholds, and software tools, is essential for reproducibility.

How are ADNP-FITC antibodies being utilized in neurodevelopmental and neurodegenerative research?

ADNP-FITC conjugated antibodies serve as valuable tools in diverse neuroscience research applications:

Current Research Applications:

  • Neurodevelopmental studies:

    • Tracking ADNP expression during critical developmental windows

    • Examining ADNP localization in neural progenitor cells versus differentiated neurons

    • Investigating ADNP in syndromic neurodevelopmental disorders

  • Neurodegenerative disease research:

    • Analyzing ADNP expression changes in Alzheimer's disease models

    • Studying ADNP interaction with tau protein in tauopathies

    • Examining ADNP in cellular stress responses relevant to neurodegeneration

  • ADNP syndrome investigations:

    • Characterizing cellular consequences of ADNP mutations

    • Developing cellular models for drug screening

    • Monitoring potential therapies aimed at restoring ADNP function

  • Basic neurobiology:

    • Examining ADNP subcellular localization in response to neuronal activity

    • Studying ADNP involvement in dendritic spine formation and synaptic plasticity

    • Investigating interactions between ADNP and chromatin remodeling complexes

These applications leverage the direct visualization capabilities of FITC-conjugated antibodies to monitor ADNP expression and localization across developmental stages and disease conditions.

What are the emerging applications of ADNP antibodies in cancer research and potential therapeutic development?

Recent research has expanded ADNP investigation into oncology:

Cancer Research Applications:

  • Expression profiling:

    • Characterizing ADNP expression across cancer types and stages

    • Correlating expression with clinical outcomes and treatment responses

    • Identifying potential prognostic significance

  • Molecular mechanisms:

    • Investigating ADNP's role in cell cycle regulation and apoptosis resistance

    • Studying ADNP interaction with p53 pathway components

    • Examining ADNP involvement in DNA damage response pathways

  • Therapeutic targeting:

    • Developing peptide-based approaches targeting ADNP protein-protein interactions

    • Exploring ADNP as a biomarker for treatment stratification

    • Investigating potential for ADNP-directed immunotherapies

  • Epigenetic regulation:

    • Analyzing ADNP's role in chromatin remodeling in cancer cells

    • Studying interactions with histone modification enzymes

    • Examining potential synergy with epigenetic-targeted therapies

FITC-conjugated ADNP antibodies facilitate these investigations through direct visualization of expression patterns and subcellular localization in cancer cells and tissues, supporting both basic and translational oncology research.

What is the recommended protocol for using ADNP-FITC antibodies in live-cell imaging applications?

Live-cell imaging with FITC-conjugated antibodies presents unique challenges but offers valuable insights into dynamic ADNP behaviors:

Recommended Protocol:

  • Cell preparation:

    • Culture cells in fluorescence-compatible imaging dishes or chambers

    • Use phenol red-free media to reduce background fluorescence

    • Maintain physiological conditions during imaging (temperature, CO₂, humidity)

  • Antibody delivery options:

    • Microinjection of ADNP-FITC antibodies (most precise but technically challenging)

    • Cell-penetrating peptide conjugation to facilitate membrane crossing

    • Gentle permeabilization with digitonin followed by antibody incubation

    • Electroporation for temporary membrane permeabilization

  • Optimization considerations:

    • Use minimal effective antibody concentration to reduce interference with endogenous protein function

    • Include non-binding FITC-IgG controls to assess potential functional effects of antibody presence

    • Perform viability assessments to ensure imaging conditions maintain cell health

    • Compare fixed and live cell patterns to validate approach

  • Imaging parameters:

    • Minimize exposure time and illumination intensity to reduce phototoxicity

    • Implement time-lapse intervals appropriate for the expected dynamics

    • Consider spinning disk confocal for reduced photobleaching and phototoxicity

While challenging, live-cell ADNP imaging can provide unique insights into protein dynamics not accessible through fixed-cell approaches.

How can researchers optimize western blotting protocols specifically for ADNP detection using FITC-conjugated antibodies?

Western blotting for ADNP requires specific optimization due to its high molecular weight and sometimes low abundance:

Optimized Western Blot Protocol:

  • Sample preparation:

    • Include protease inhibitors in lysis buffers

    • For nuclear ADNP, use nuclear extraction protocols

    • Sonicate samples to shear DNA and release DNA-bound ADNP

  • Gel electrophoresis:

    • Use lower percentage gels (6-8%) to resolve high molecular weight ADNP (~124 kDa)

    • Extend running time to achieve good separation in high molecular weight range

    • Include molecular weight markers covering 100-150 kDa range

  • Transfer optimization:

    • Implement extended transfer times for high molecular weight proteins

    • Consider wet transfer systems for more efficient transfer of large proteins

    • Use methanol-free transfer buffers to improve large protein transfer

  • Detection considerations:

    • Block membranes thoroughly (5% BSA often performs better than milk for phospho-proteins)

    • Incubate with ADNP-FITC antibodies overnight at 4°C

    • Shield from light during all steps after FITC-antibody addition

    • Image using fluorescence scanners with appropriate filter sets

  • Controls and validation:

    • Include positive control lysates (e.g., brain tissue extracts)

    • Run recombinant ADNP when available as size reference

    • Consider using ADNP-overexpressing cell lines as additional controls

This optimized protocol addresses the specific challenges of detecting ADNP while leveraging the direct visualization capabilities of FITC conjugation .

How do ADNP-FITC antibodies compare with other conjugated fluorophores for specific research applications?

Different fluorophore conjugates offer distinct advantages depending on experimental goals:

Comparative Fluorophore Analysis:

FluorophoreExcitation/EmissionAdvantagesLimitationsBest Applications
FITC495/519 nmWidely compatible with standard filter sets, EconomicSusceptible to photobleaching, pH-sensitiveBasic fluorescence microscopy, Flow cytometry
Alexa Fluor 488496/519 nmMore photostable than FITC, pH-insensitiveHigher costLong-term imaging, Quantitative applications
PE496/578 nmBrighter than FITC, Good for flow cytometryLarger size may affect penetrationFlow cytometry, Cell sorting
APC650/660 nmFar-red emission reduces autofluorescenceHighly sensitive to photobleachingMultiplex imaging with FITC-ADNP
DyLight 488493/518 nmSuperior photostability, Water solubleHigher costAdvanced imaging applications

Selection should be based on specific experimental requirements, equipment specifications, and planned multiplexing strategies. For standard applications with common equipment, FITC-conjugated ADNP antibodies provide a cost-effective and widely compatible option .

What criteria should researchers use when selecting between different commercially available ADNP-FITC antibodies?

Selecting the optimal ADNP-FITC antibody requires evaluation of several critical factors:

Selection Framework:

  • Epitope considerations:

    • Central region antibodies (AA 702-731) vs. C-terminal antibodies (AA 867-1102)

    • Match epitope to experimental question (e.g., domain-specific functions)

    • Consider epitope accessibility in your experimental system

  • Validation evidence:

    • Extent of validation data provided by manufacturer

    • Published literature using the specific antibody

    • Validation across multiple applications

    • Species validation matching experimental models

  • Technical specifications:

    • FITC:protein ratio (affects brightness and potential interference)

    • Antibody concentration and recommended dilutions

    • Purification method (affects specificity and background)

    • Buffer compatibility with planned applications

  • Application-specific performance:

    • Match antibody to primary application (WB, IF, ELISA, etc.)

    • Evaluate background levels in similar experimental systems

    • Consider lot-to-lot consistency for long-term projects

  • Cost considerations:

    • Price per experiment based on recommended dilutions

    • Shipping and storage requirements

    • Availability and lead time

Requesting validation data from manufacturers and conducting small-scale pilot studies with multiple antibodies may be valuable for critical applications or novel experimental systems.

What are the best practices for documenting and reporting ADNP-FITC antibody usage in scientific publications?

Transparent reporting is essential for experimental reproducibility and data interpretation:

Documentation Best Practices:

  • Antibody identification:

    • Complete catalog information including manufacturer, catalog number, and lot number

    • Clone identification for monoclonal antibodies

    • Host species and antibody class/isotype

    • FITC conjugation specifications and method

  • Validation documentation:

    • Description of validation methods performed (western blot, blocking peptides, etc.)

    • Inclusion of validation controls in supplementary materials

    • Reference to previous validations in literature when applicable

  • Experimental conditions:

    • Detailed protocols including antibody dilutions, incubation times, and temperatures

    • Buffer compositions and pH values

    • Blocking reagents and concentrations

    • Counterstaining methodologies

  • Imaging and analysis parameters:

    • Microscope specifications and settings (exposure times, gain settings)

    • Image processing methods (background subtraction, normalization)

    • Quantification methodologies and statistical approaches

    • Software tools with version numbers

  • Resource sharing:

    • Consideration of depositing images in public repositories

    • Availability of detailed protocols through protocol sharing platforms

    • Disclosure of any modifications to manufacturer's recommended protocols

These documentation practices enhance reproducibility and facilitate appropriate interpretation of results by the scientific community.

What future developments might enhance the utility of ADNP antibodies for research applications?

The future landscape of ADNP antibody technology offers promising directions:

Emerging Developments:

  • Enhanced conjugation technologies:

    • Site-specific conjugation methods preserving antibody function

    • Photoactivatable or photoswitchable fluorophore conjugates for super-resolution applications

    • Conjugation with brighter, more photostable next-generation fluorophores

  • Refined specificity:

    • Development of conformation-specific antibodies distinguishing ADNP functional states

    • Antibodies specific to post-translationally modified ADNP forms

    • Highly selective antibodies distinguishing between ADNP and ADNP2

  • Functional antibodies:

    • Intrabodies designed for live-cell tracking without functional interference

    • Function-blocking antibodies targeting specific ADNP interactions

    • Cell-penetrating antibody formats for live-cell applications

  • Multimodal detection:

    • Dual-labeled antibodies combining fluorescence with other detection modalities

    • Antibody fragments with reduced size for improved tissue penetration

    • Nanobody alternatives offering smaller size and potentially improved access to restricted epitopes

  • High-throughput applications:

    • Integration with advanced tissue clearing and 3D imaging technologies

    • Adaptation for high-content screening applications

    • Compatibility with automated staining and imaging platforms

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