AGD2 Antibody

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Description

Background on ADP-Ribosylation Factor GTPase-Activating Proteins

ADP-ribosylation factor GTPase-activating proteins (ARF GAPs) play a vital role in regulating the activity of ADP-ribosylation factors (ARFs), which are involved in various cellular processes including membrane trafficking, cytoskeleton organization, and lipid metabolism. ARF GAPs facilitate the hydrolysis of GTP bound to ARFs, thereby controlling their activation state and ensuring proper cellular function .

Table: Known Members of the AGD Family in Arabidopsis thaliana

ClassMembers
Class 1AGD1, AGD2, AGD3, AGD4
Class 2Other members
Class 3Other members
Class 4Other members

Note: Specific details about other classes and their members are not provided here due to the focus on AGD2.

Future Directions

Future research should focus on exploring the AGD2 antibody's potential applications in plant biology and biotechnology. This could involve using the antibody to study AGD2's role in plant stress responses or developmental processes. Additionally, understanding how AGD2 interacts with other cellular components could reveal new targets for improving plant resilience or productivity.

References Conformation of the Human Immunoglobulin G2 Hinge Imparts FcγR-Independent Agonistic Activity to Immune-Stimulatory Monoclonal Antibodies. Genes Linked to High Production of Key Antibody. Plant-Integrated Protectants (PIPs): Topics by Science.gov. AGR2 Monoclonal Antibody (10E2) (MA5-16244). VUMC Method Tracks Down Rare, Broadly Reacting Antibodies: Study. Antibody - Wikipedia. Ganglioside GD2 Specific Monoclonal Antibody 3F8. AGD2 / Anti-ADP-ribosylation factor GTPase-activating protein.

Product Specs

Buffer
Preservative: 0.03% ProClin 300; Constituents: 50% Glycerol, 0.01M Phosphate Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
14-16 weeks lead time (made-to-order)
Synonyms
AGD2 antibody; At1g60860 antibody; F23C21.2 antibody; T7P1.1ADP-ribosylation factor GTPase-activating protein AGD2 antibody; ARF GAP AGD2 antibody; Protein ARF-GAP DOMAIN 2 antibody; AtAGD2 antibody
Target Names
AGD2
Uniprot No.

Target Background

Function
Putative GTPase-activating protein.
Database Links

KEGG: ath:AT1G60860

STRING: 3702.AT1G60860.1

UniGene: At.36578

Tissue Specificity
Expressed in roots, hypocotyls, cotyledons, leaf and shoot apical meristems and siliques.

Q&A

Basic Understanding of αGD2 Antibody Targets

What is the GD2 ganglioside and why is it targeted in cancer therapy?

GD2 is a disialoganglioside molecule composed of a glycosphingolipid with two sialic acid moieties. It is synthesized through the 'b' pathway of ganglioside biosynthesis, where ceramide is converted to GM3, then to GD3 (via GD3 synthase), and finally to GD2 (via GM2/GD2 synthase) .

GD2 represents an optimal therapeutic target because:

  • It is ubiquitously and highly expressed on all human neuroblastoma samples

  • Its expression in normal tissues is restricted primarily to cerebellum and peripheral nerves

  • It appears in multiple cancer types including osteosarcoma, glioblastoma, breast cancer, and melanoma

  • Some studies suggest GD2 functions as a cancer stem cell marker in certain tumors

  • High GD2 expression correlates with aggressive cancer phenotypes and metastatic potential

Research indicates that targeting GD2 with antibodies effectively triggers immune-mediated tumor cell destruction while minimizing off-target effects.

Mechanism of Action Investigation

What are the primary mechanisms through which αGD2 antibodies exert anti-tumor effects?

αGD2 antibodies operate through several distinct mechanisms:

  • Antibody-Dependent Cellular Cytotoxicity (ADCC): The Fc domain of αGD2 antibodies recruits effector cells (primarily NK cells and neutrophils) to induce target cell death. To enhance ADCC, αGD2 therapy is often combined with GM-CSF (activates neutrophils) and IL-2 (activates NK cells) .

  • Complement-Dependent Cytotoxicity (CDC): The Fc domain activates the complement cascade, leading to membrane attack complex formation and target cell lysis .

  • Potential Direct Cytotoxicity (debated mechanism): Some studies report αGD2 antibodies can directly induce cell death through:

    • Increased PARP cleavage in melanoma cells treated with 3F8 antibody

    • Enhanced caspase-3 activation in IMR-32 cells treated with 14G2a antibody

    • Cell death partially rescued by pan-caspase inhibitor Z-VAD-FMK

  • Potential Anoikis Induction: Some research suggests αGD2 antibody binding may disrupt cell adhesion processes (as GD2 participates in adhesion), triggering detachment-induced cell death .

The relative contribution of each mechanism may vary depending on the specific αGD2 antibody clone, target cell type, and experimental or clinical context.

Research Models Selection

What experimental models are most appropriate for studying αGD2 antibody efficacy in vivo?

Based on current research practices, several complementary models provide valuable insights into αGD2 antibody efficacy:

Model TypeAdvantagesKey ApplicationsExample from Literature
Subcutaneous (s.c.)- Easy tumor growth monitoring
- Direct size measurement
- Technical simplicity
Initial efficacy screening
Combination therapy studies
"LCL161 and αGD2 antibody combine to delay tumor growth in NXS2 s.c. tumor model"
Orthotopic- Mimics natural tumor environment
- Better recapitulates clinical disease
Survival studies
Metastatic progression
Microenvironment interactions
"Combination of LCL161 and αPD-L1 antibody against NXS2 orthotopic tumor model slightly extends mouse survival"
Intravenous (i.v.)- Models systemic disease
- Evaluates metastatic potential
Metastasis studies
Circulating tumor cell research
Established in NXS2 and N2a cell models

Most research employs murine neuroblastoma cell lines (primarily NXS2 and N2a) with consistent GD2 expression. Advanced studies frequently use bioluminescent tracking (e.g., "NXS2-fluc cells") for longitudinal monitoring .

For comprehensive evaluation, researchers should consider employing multiple models, as mechanisms of action and efficacy may differ between subcutaneous and orthotopic environments.

Antibody Validation Techniques

How can researchers optimize αGD2 antibody isolation and validation for experimental use?

Rigorous validation is essential for reliable αGD2 antibody research. Based on established protocols, a comprehensive validation workflow includes:

  • Isolation and Purification:

    • Gravity column antibody isolation (e.g., for ME361-S2a antibody)

    • SDS-PAGE analysis to confirm purity and integrity

  • Multi-modal Binding Validation:

    • Immunofluorescence: Compare staining patterns between isolated and commercial antibodies using GD2+ and GD2- cell lines as positive and negative controls

    • Flow Cytometry: Quantitatively assess binding specificity and intensity across multiple cell lines

    • Intracellular Staining: Develop specialized protocols for more consistent GD2 detection, particularly in cases where surface expression varies

  • Functional Validation:

    • ADCC Assays: Confirm the antibody's ability to mediate antibody-dependent cellular cytotoxicity using appropriate effector cells (e.g., LAK cells)

    • Direct Cytotoxicity Testing: Evaluate potential direct cell-killing effects in the absence of effector cells

    • Complement Activation: Assess the antibody's ability to trigger complement-dependent cytotoxicity

  • Expression Analysis:

    • Monitor potential effects of experimental conditions on GD2 expression

    • Establish standardized quantification methods for consistent reporting

The research demonstrates that comprehensive validation across multiple platforms is critical, as variability in GD2 detection has been reported with different methodologies.

GD2 Expression Measurement

What methodologies are most effective for measuring GD2 expression in research models?

Accurate GD2 expression measurement requires tailored approaches depending on the research question:

  • Flow Cytometry:

    • Provides quantitative assessment of expression percentage and intensity

    • Note: Variability in GD2 staining has been documented (Figure 14 in reference)

    • Considerations:

      • Surface vs. intracellular protocols yield different results

      • Standardized protocols are essential for consistent detection

      • Include well-characterized positive and negative controls

  • Immunofluorescence Microscopy:

    • Enables visualization of GD2 localization

    • Useful for qualitative assessment in tissue sections

    • Particularly valuable for spatial distribution analysis

  • Intracellular Staining Approaches:

    • Specialized protocols can reliably distinguish GD2+ from GD2- cell populations

    • May offer more consistent results in certain contexts

    • Particularly useful when surface expression is variable

  • Expression Modeling Systems:

    • RMA/RMA-S cell systems allow controlled investigation of factors affecting GD2 expression

    • Enable study of expression changes under treatment conditions

For maximum reliability, researchers should employ multiple complementary detection methods, standardize protocols across experiments, and maintain appropriate controls. The research indicates that GD2 expression analysis requires particular attention to technical parameters to ensure reproducible results.

Combination Therapy Investigation

What is the evidence for combining αGD2 antibody therapy with IAP antagonists?

Emerging research supports the potential benefit of combining αGD2 antibody therapy with Inhibitor of Apoptosis (IAP) antagonists such as LCL161:

  • Mechanistic Rationale:

    • IAP proteins (commonly upregulated in cancers) prevent cell death by inhibiting caspases and controlling NF-κB activity

    • Smac mimetic compounds (SMCs) like LCL161 target IAP activity, potentially sensitizing cancer cells to death signals

  • Preclinical Evidence:

    • Dual combination efficacy: "LCL161 and αGD2 antibody combine to delay tumor growth in NXS2 s.c. tumor model" (Figure 20)

    • The combination of LCL161 and αGD2 antibody (clone ME361-S2a) produced a significant delay in tumor progression compared to either agent alone

  • Complementary Mechanisms:

    • While neuroblastoma cell lines showed resistance to LCL161-mediated apoptosis in vitro, LCL161 demonstrated significant anti-angiogenic effects in vivo

    • This anti-angiogenic activity was confirmed through ultrasound imaging and necropsy evaluation

    • The two agents may work through distinct yet complementary mechanisms:

      • αGD2: Immune-mediated tumor cell killing

      • LCL161: Anti-angiogenic effects and potential sensitization to immune attack

  • Triple Combination Approach:

    • Adding αPD-L1 antibody to the LCL161/αGD2 combination further delayed tumor growth

    • This suggests targeting multiple pathways simultaneously (GD2, PD-L1/PD-1 axis, and IAP) provides enhanced anti-tumor effects

These findings suggest that IAP antagonists may address resistance mechanisms and enhance the efficacy of αGD2 antibody therapy through complementary mechanisms of action.

Immune Checkpoint Interaction Analysis

How does αGD2 antibody therapy affect the expression of immune checkpoint molecules?

Research has revealed important interactions between αGD2 therapy and immune checkpoint pathways:

  • Immune Checkpoint Upregulation:

    • αGD2 and IL-2 therapy upregulates PD-L1 expression in neuroblastoma cell lines, including NXS2 and Lan-1

    • This upregulation potentially limits therapeutic efficacy by activating the PD-1/PD-L1 inhibitory pathway

  • Baseline Checkpoint Expression in Neuroblastoma:

    • Neuroblastoma tumors and cell lines express various immune checkpoints (PD-1, CTLA-4) and their ligands (PD-L1, CD80, CD86)

    • PD-L1 expression prevalence in neuroblastoma samples varies widely in literature (reports of 0%, 14%, and 72%)

  • Therapeutic Implications:

    • The observed checkpoint upregulation provides strong rationale for combination approaches

    • Research shows αGD2 antibody combined with αPD-1 antibody was successful in treating NXS2 tumors

    • This combination increased survival and enhanced cytotoxicity against neuroblastoma cells

  • Methodological Considerations:

    • Researchers should assess baseline and post-treatment expression of multiple checkpoint molecules

    • Time course analysis is critical, as checkpoint upregulation may be dynamic

    • Investigation of underlying cellular mechanisms driving upregulation can inform optimal combination strategies

This bidirectional relationship between αGD2 therapy and immune checkpoint expression has significant implications for designing more effective combination immunotherapy approaches.

Combination Immunotherapy Design

What experimental approaches have been successful in combining αGD2 antibody with immune checkpoint inhibitors?

Multiple experimental approaches have demonstrated efficacy when combining αGD2 antibody with immune checkpoint inhibitors:

  • Dual Combinations with PD-1/PD-L1 Pathway Inhibitors:

    • Research has shown that combining αGD2 antibody with αPD-1 antibody successfully treated NXS2 tumors

    • This combination increased mouse survival and enhanced cytotoxicity against NXS2 cells

    • A clinical trial is being organized to translate this therapeutic combination to patients

  • Triple Combination Therapy Approaches:

    • Figure 24 in the search results demonstrates that a triple combination of αGD2 antibody, αPD-L1 antibody, and LCL161 (an IAP antagonist) further delayed NXS2 subcutaneous tumor growth compared to dual combinations

    • This suggests that targeting multiple immunosuppressive pathways simultaneously provides additive or synergistic benefits

  • Alternative Immune Checkpoint Combinations:

    • αPD-L1 or αCTLA-4 therapies showed efficacy against NXS2 and N2a mouse models when used:

      • In combination with each other

      • With tumor vaccines

      • With αCD4 antibody

  • Checkpoint Inhibitor Selection:

    • αPD-L1 antibody was identified as the most effective immune checkpoint inhibitor when combined with LCL161 against the NXS2 subcutaneous model (Figure 22)

    • This highlights the importance of systematic testing of different checkpoint inhibitors

The research suggests that rational combination design should consider the specific molecular and immunological characteristics of the tumor model, with PD-L1 blockade showing particular promise in enhancing αGD2 antibody efficacy.

Direct Cytotoxicity Mechanisms

What evidence exists for direct cytotoxicity mechanisms of αGD2 antibodies?

The direct cytotoxicity of αGD2 antibodies remains an area of active investigation, with several proposed mechanisms:

  • Apoptotic Pathway Activation:

    • Human melanoma cell line HTB63 showed increased PARP cleavage after 3F8 (an αGD2 antibody) treatment

    • Treatment of IMR-32 cells with 14G2a antibody led to increased caspase-3 cleavage

    • Cell death partially rescued by pan-caspase inhibitor Z-VAD-FMK, suggesting caspase-dependent mechanisms

  • Necroptosis Features:

    • Some studies report that αGD2 antibody-mediated cytotoxicity displays characteristics of both apoptosis and necroptosis

    • The specific molecular pathways driving this response remain under investigation

  • Anoikis-Mediated Cell Death:

    • GD2 plays a role in cell adhesion, and antibody binding may disrupt adhesion-dependent survival signals

    • Some research suggests αGD2 antibody cytotoxicity occurs through anoikis (detachment-induced cell death)

  • Isotype-Dependent Effects:

    • Some studies suggest direct cytotoxicity depends on antibody isotype

    • IgM class αGD2 antibodies have been reported as non-cytotoxic in some studies

    • Other research shows Fab fragments capable of mediating cell death

  • Chemosensitization:

    • αGD2 antibody treatment enhanced sensitivity to six chemotherapeutics (doxorubicin, etoposide, SN-38, paclitaxel, vinorelbine, and cisplatin) in GD2-expressing cells

Methodological considerations are crucial when studying direct cytotoxicity, as effects may vary with antibody concentration, cell type, and experimental conditions. The conflicting findings highlight the need for standardized approaches to fully elucidate these mechanisms.

Tumor Microenvironment Influence

How does the tumor microenvironment influence αGD2 antibody therapy efficacy?

The tumor microenvironment substantially impacts αGD2 antibody efficacy through multiple mechanisms:

  • Immune Checkpoint Regulation:

    • Neuroblastoma tumors express immune checkpoints (PD-1, CTLA-4) and their ligands (PD-L1, CD80, CD86)

    • αGD2 and IL-2 therapy upregulates PD-L1 expression in neuroblastoma cell lines

    • This upregulation can limit efficacy by activating immunosuppressive pathways

  • Vascularization and Angiogenesis:

    • Neuroblastoma is highly vascularized, a feature reflected in mouse models

    • B-type gangliosides (including GD2) may promote tumor vascularization

    • The MYCN oncogene downregulates angiogenesis inhibitors (e.g., activin A)

    • LCL161 (an IAP antagonist) demonstrated anti-angiogenic effects in neuroblastoma models

    • Targeting angiogenesis could potentially enhance αGD2 antibody efficacy

  • Effector Cell Availability and Function:

    • αGD2 antibody efficacy depends on ADCC, requiring functional effector cells

    • To enhance ADCC, αGD2 therapy is combined with:

      • GM-CSF (activates neutrophils)

      • IL-2 (activates NK cells)

    • The tumor microenvironment can impair effector cell recruitment and function

  • Model-Dependent Considerations:

    • Different tumor models (subcutaneous vs. orthotopic) create distinct microenvironments

    • Combination therapies targeting both tumor cells and microenvironment components show enhanced efficacy

Understanding these microenvironmental influences is critical for designing effective combination strategies and identifying patients most likely to benefit from αGD2 antibody therapy.

ADCC Assay Design

What are the critical factors in designing ADCC assays for evaluating αGD2 antibody function?

Designing reliable ADCC assays for αGD2 antibody evaluation requires attention to several critical parameters:

  • Effector Cell Preparation and Characterization:

    • The research utilized Lymphokine-Activated Killer (LAK) cells as effectors

    • Critical quality attributes include:

      • Viability: "LAK population is viable, of high purity, and capable of lysing cells" (Figure 17)

      • Purity: Flow cytometric confirmation of effector cell phenotype

      • Cytolytic capacity: Verification that LAKs effectively lyse target cells

  • Effector Cell Sensitivity to Experimental Compounds:

    • Research found "LAKs are sensitive to necroptosis with LCL161" (Figure 18)

    • This highlights the importance of:

      • Testing experimental compounds' effects on effector viability

      • Establishing appropriate controls to distinguish direct effects on effectors from effects on ADCC

      • Optimizing compound concentrations to minimize unintended effects

  • Target Cell Selection and Validation:

    • GD2 expression verification is essential

    • The research reports variability in GD2 staining across methods

    • Consistent expression validation ensures reliable results

  • Antibody Functionality Discrimination:

    • "ME361-S2a antibody is capable of mediating ADCC but is not directly cytotoxic" (Figure 19)

    • Essential controls include:

      • No-effector controls to assess direct antibody cytotoxicity

      • Isotype controls to confirm specificity

      • Positive controls with known ADCC-inducing antibodies

  • Parameter Optimization:

    • Effector-to-target ratios: Multiple ratios should be tested

    • Antibody concentration range: Establish dose-response relationships

    • Incubation times: Optimize to capture complete ADCC response

These considerations ensure that ADCC assays accurately reflect the immune-mediated mechanisms of αGD2 antibody activity against neuroblastoma.

GD2 Expression in Cancer Types

Which cancer types express GD2 and represent potential targets for αGD2 antibody therapy?

GD2 expression has been documented across multiple cancer types, making them potential candidates for αGD2 antibody therapy:

Cancer TypeGD2 Expression CharacteristicsTherapeutic Implications
NeuroblastomaUbiquitous and high expression on all samples evaluatedDinutuximab (αGD2 antibody) approved for high-risk neuroblastoma treatment in 2015
OsteosarcomaGD2 expression documentedPotential target for therapy expansion
GlioblastomaGD2 proposed as cancer stem cell markerMay target therapy-resistant stem-like cells
Breast cancerMore common in aggressive subtypesHigh expression correlates with invasive potential
MelanomaGD2 expression documentedSeveral αGD2 antibodies tested in melanoma models
Neuroectodermal origin cancersVarious neural crest-derived tumors express GD2Broader applications for neural crest-derived malignancies

The limited expression of GD2 in normal tissues (primarily cerebellum and peripheral nerves) provides a favorable therapeutic window, minimizing off-target effects while allowing specific targeting of multiple cancer types .

Some studies suggest GD2 may serve as a cancer stem cell marker in glioblastoma and breast cancer, with expression correlating with other stem cell markers like CD133. This indicates αGD2 therapy might specifically target therapy-resistant cancer stem cell populations .

Antibody Clone Differences

What are the different αGD2 antibody clones used in research, and how do they differ?

Multiple αGD2 antibody clones have been developed, each with distinct characteristics relevant to research and clinical applications:

Antibody CloneStructureDevelopment HistoryResearch/Clinical Applications
Dinutuximab (ch14.18)Chimeric: mouse variable regions with human IgG1 constant domainChimerized from 14.G2a, an IgG2a class switch variant of antibody 14.18FDA-approved in 2015 for high-risk neuroblastoma; administered with IL-2 and GM-CSF
14.G2aMouse IgG2aClass switch variant of 14.18; designed to reduce human anti-mouse antibody (HAMA) syndrome responsesPrecursor to dinutuximab; used in preclinical studies
3F8Mouse monoclonalOne of the earliest αGD2 antibodies developedUnder investigation in clinical studies; showed PARP cleavage induction in melanoma cells
ME361-S2aMouse IgG2aProduced by mouse hybridoma HB-9326Used primarily in experimental studies; capable of mediating ADCC but not directly cytotoxic in some studies

Key functional differences between clones include:

  • Isotype variations affecting immune effector functions

  • Humanization/chimerization affecting immunogenicity

  • Binding affinity and epitope specificity differences

  • Variable direct cytotoxicity potential

These differences have important implications for both research applications and clinical translation, as they influence mechanisms of action, efficacy, and potential side effects.

Angiogenesis Assessment

How can researchers assess the impact of αGD2 antibody therapy on tumor angiogenesis?

Multiple complementary approaches can effectively evaluate the effects of αGD2 antibody therapy on tumor angiogenesis:

  • Ultrasound Imaging:

    • Non-invasive visualization of tumor vasculature

    • Quantitative assessment of blood flow dynamics

    • Longitudinal monitoring of vascularization changes during therapy

    • The research confirmed an in vivo anti-angiogenic effect of LCL161 through ultrasound imaging

  • Necropsy Evaluation:

    • Direct visual assessment of tumor vasculature post-mortem

    • Macroscopic quantification of vascularization

    • Collection of tissue samples for further analysis

    • The research utilized necropsy evaluation alongside ultrasound to confirm anti-angiogenic effects

  • Analysis of Angiogenic Factors:

    • MYCN oncogene can down-regulate inhibitors of angiogenesis, such as activin A

    • Measuring VEGF and other pro-angiogenic factor levels before and after treatment

    • Analyzing expression of angiogenesis inhibitors

    • Evaluating changes in angiogenic signaling pathways

  • Combination Therapy Approaches:

    • The research demonstrated that "LCL161 and sunitinib combine to delay tumor growth"

    • Sunitinib is a known anti-angiogenic tyrosine kinase inhibitor

    • Combining αGD2 antibody with anti-angiogenic agents provides insights into angiogenesis-related mechanisms

  • Experimental Considerations:

    • Different tumor models (subcutaneous vs. orthotopic) may have distinct vascularization patterns

    • Timing of assessments is critical, as angiogenic effects may vary during treatment

    • Standardized quantification methods enhance reproducibility

The research suggests B-type gangliosides (including GD2) may promote tumor vascularization, indicating that targeting GD2 might have both direct and indirect effects on tumor angiogenesis.

GD2 Biosynthesis in Cancer

What is the biosynthetic pathway of GD2 and how might it be therapeutically targeted?

GD2 is synthesized through a sequential enzymatic pathway that presents multiple potential intervention points:

This pathway understanding provides opportunities for multi-targeted approaches that could enhance current αGD2 antibody therapies by addressing resistance mechanisms and improving therapeutic windows.

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