AGL19 Antibody

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Description

Understanding AGL19 in Plant Biology

AGL19 is involved in the regulation of flowering time in Arabidopsis. It is induced by vernalization, a process where plants are exposed to cold temperatures to accelerate flowering. The expression of AGL19 is influenced by Polycomb-group proteins and other regulatory elements .

Gene/ProteinFunctionRole in Vernalization
AGL19Floral activatorPromotes flowering in response to cold exposure
SOC1Floral activatorWorks with AGL19 but not required for its function
VIN3Vernalization mediatorRequired for AGL19 expression increase during vernalization

Antibodies in Immunology

Antibody TypeFunctionExamples
IgGNeutralizes pathogens, opsonizationCommonly used in therapeutic applications9
IgMEarly immune response, activates complementEffective against viruses

References https://pmc.ncbi.nlm.nih.gov/articles/PMC1482485/ https://journals.plos.org/plospathogens/article?id=10.1371%2Fjournal.ppat.1012246 https://pmc.ncbi.nlm.nih.gov/articles/PMC6588422/4 https://www.youtube.com/watch?v=g2nJvfShLs8 https://genesdev.cshlp.org/content/20/12/1667.short https://pmc.ncbi.nlm.nih.gov/articles/PMC10773713/ https://en.wikipedia.org/wiki/Antibody https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.131619 https://www.youtube.com/watch?v=v9jl9QpVz10

Product Specs

Buffer
Preservative: 0.03% ProClin 300; Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
14-16 weeks (Made-to-order)
Synonyms
AGL19 antibody; At4g22950 antibody; F7H19.130 antibody; Agamous-like MADS-box protein AGL19 antibody
Target Names
AGL19
Uniprot No.

Target Background

Function
AGL19 is a probable transcription factor that promotes flowering, particularly in response to vernalization (short periods of cold), independently of FLC.
Gene References Into Functions
AGL19 expression is tightly regulated. Its low basal expression levels are maintained by Polycomb group (PcG) proteins MSI1, CLF, and EMF2. Furthermore, AGL19 partially contributes to the early flowering phenotype observed in *clf* mutants. (PMID: 16778081)
Database Links

KEGG: ath:AT4G22950

STRING: 3702.AT4G22950.1

UniGene: At.2376

Subcellular Location
Nucleus.
Tissue Specificity
Mostly expressed in the outer layers of the root meristem (lateral root cap and epidermis) and in the central cylinder cells of mature roots. Also present in rosette leaves and seedlings and, to a lesser extent, in cauline leaves and flowers. Enriched in

Q&A

What are the predominant autoantibodies detected in AGL patients?

Anti-PLIN1 (perilipin-1) autoantibodies are the primary autoantibodies detected in AGL. These autoantibodies are found in approximately 50% of patients with AGL and are considered a diagnostic biomarker of the disease . Anti-PLIN1 targets perilipin-1, which is a protein that coats lipid droplets and regulates lipolysis. The presence of these autoantibodies has been strongly linked to the development of lipodystrophy in affected patients .

What immunoglobulin subtypes of anti-PLIN1 are typically observed?

Anti-PLIN1 autoantibodies are predominantly of the IgG type, with IgG1 being the most prevalent subclass (78.9% of patients). Other detected subclasses include IgG3 (63.2%), IgG2 (26.3%), and IgG4 (5.2%). Additionally, some patients present with IgM autoantibodies, particularly those with shorter disease duration . The presence of multiple Ig subtypes indicates a polyclonal origin of these autoantibodies .

How are light chains distributed in anti-PLIN1 autoantibodies?

Regarding light chain distribution, 25% of patients display only κ light chains, while 75% exhibit both κ and λ light chains. Notably, no patients in the studied cohort presented with λ-only light chains . This distribution pattern further supports the polyclonal nature of the autoimmune response in AGL patients.

What are the preferred methods for detecting anti-PLIN1 autoantibodies?

ELISA (Enzyme-Linked Immunosorbent Assay) is the most commonly employed method for detecting anti-PLIN1 autoantibodies. The technique typically involves coating plates with recombinant PLIN1 protein or specific fragments, followed by detection using HRP-conjugated secondary antibodies specific for human IgG, IgM, or IgA . For quantification purposes, a reference patient serum (typically from an index patient) is assigned an arbitrary value (e.g., 1,000 arbitrary units/mL), and results from other samples are interpolated to this standard curve .

How should researchers approach antibody characterization to ensure experimental validity?

Proper antibody characterization is critical for research integrity and reproducibility. Researchers should:

  • Verify antibody specificity through multiple techniques (e.g., ELISA, Western blot, immunoprecipitation)

  • Perform validation in the specific experimental context where the antibody will be used

  • Include appropriate positive and negative controls

  • Document batch information and storage conditions

  • Conduct epitope mapping when possible to understand binding characteristics

  • Test for cross-reactivity with similar antigens

Remember that antibody specificity is context-dependent, and characterization needs to be performed by end users for each specific application .

What epitope mapping techniques are useful for anti-PLIN1 autoantibodies?

Epitope mapping for anti-PLIN1 autoantibodies can be performed using overlapping fragments or peptides spanning the full PLIN1 protein sequence. In a detailed study, researchers used eight overlapping PLIN1 fragments and identified fragment 233-405 as being recognized by 100% of patients with both IgG and IgM autoantibodies . Further fine mapping with 12 overlapping peptides within this region revealed that the 383-403 peptide was recognized by 100% of patients, indicating a major immunodominant epitope .

How can researchers quantify and standardize anti-PLIN1 autoantibody levels?

To quantify anti-PLIN1 autoantibody levels:

  • Establish a reference standard using a well-characterized positive control serum (e.g., from an index patient)

  • Assign this standard an arbitrary value (e.g., 1,000 AU/mL)

  • Create a standard curve using serial dilutions of this reference serum

  • Interpolate test sample values to this curve

  • Report values in arbitrary units (AU/mL)

  • Include internal quality controls across assay runs to ensure consistency

The table below illustrates the wide range of anti-PLIN1 titers observed in AGL patients:

Patient CodeAGL VarietyAutoantibody IsotypeIgG Titer (AU/mL)IgM Titer (AU/mL)
AGL1AutoimmuneIgG, IgM323.21,513.4
AGL3AutoimmuneIgG, IgM1,000*1,000*
AGL9AutoimmuneIgG7,998.2
AGL33Panniculitis plus autoimmuneIgG33,640
AGL39Panniculitis plus autoimmuneIgG, IgM198,2003,899.7

*Reference standard

How can researchers evaluate the pathogenic effects of anti-PLIN1 autoantibodies?

To assess the pathogenic effects of anti-PLIN1 autoantibodies, researchers can employ functional assays using adipocyte cell lines such as 3T3-L1 preadipocytes:

  • Lipolysis assays: Measure glycerol release in basal and stimulated conditions in the presence or absence of patient serum containing anti-PLIN1 autoantibodies

  • Lipase activity assays: Quantify lipase activity in adipocytes treated with patient serum

  • Immunofluorescence microscopy: Visualize subcellular localization of PLIN1, ABHD5, and human IgG to demonstrate autoantibody binding and interference with normal protein-protein interactions

These approaches can demonstrate that anti-PLIN1 autoantibodies increase basal lipolysis and can even enhance stimulated lipolysis in cases with high antibody titers .

What is the proposed mechanism of action for anti-PLIN1 autoantibodies in lipodystrophy pathogenesis?

The pathogenic mechanism of anti-PLIN1 autoantibodies appears to involve blocking the interaction between PLIN1 and ABHD5 (also known as CGI-58), which is essential for regulated lipolysis. Immunofluorescence studies have shown that:

  • In normal conditions, ABHD5 and PLIN1 colocalize around lipid droplets

  • Under stimulated conditions, ABHD5 relocates to the cytosol while PLIN1 remains on lipid droplets

  • In the presence of anti-PLIN1 autoantibodies, human IgG colocalizes with PLIN1 but not with ABHD5

  • This results in displacement of ABHD5 toward the cytosol, causing dysregulated lipolysis

This disruption leads to uncontrolled breakdown of triglycerides and ultimately results in the loss of adipose tissue characteristic of lipodystrophy.

What controls should be included when studying anti-PLIN1 autoantibodies?

When designing experiments to study anti-PLIN1 autoantibodies, researchers should include:

  • Healthy control sera to establish baseline values and specificity

  • Positive control sera from well-characterized AGL patients with known anti-PLIN1 titers

  • Disease control sera from patients with other autoimmune conditions to assess cross-reactivity

  • Isotype controls to evaluate nonspecific binding

  • Pre-adsorption controls using recombinant PLIN1 to confirm specificity

  • Negative controls omitting primary or secondary antibodies in immunodetection methods

How should researchers interpret the absence of anti-PLIN1 autoantibodies in some AGL patients?

The absence of detectable anti-PLIN1 autoantibodies in approximately 50% of AGL patients may be due to several factors:

  • Existence of additional, unidentified autoantigens besides PLIN1

  • Experimental limitations in antigen preparation that might conceal certain epitopes

  • Possible early disease stages where autoimmunity has not yet fully developed

  • Potential genetic variants of AGL with non-autoimmune etiologies

These considerations should guide researchers in designing studies that might identify alternative pathogenic mechanisms or novel autoantibodies in PLIN1-negative AGL patients.

How can researchers overcome issues with antibody specificity in tissue-specific applications?

To address antibody specificity challenges in tissue-specific applications:

  • Perform validation in the specific tissue type of interest

  • Use multiple antibodies targeting different epitopes of the same protein

  • Include knockout or knockdown controls when possible

  • Consider fixation and processing effects on epitope accessibility

  • Optimize antibody concentration specifically for each tissue type

  • Employ orthogonal methods to confirm findings (e.g., mass spectrometry)

It's critical to recognize that antibody characterization is potentially cell or tissue type specific, requiring validation in each experimental context .

What approaches can distinguish between anti-PLIN1 IgG and IgM isotypes in research applications?

To effectively distinguish between anti-PLIN1 IgG and IgM isotypes:

  • Use isotype-specific secondary antibodies (anti-human IgG vs. anti-human IgM)

  • Perform sequential ELISAs with different detection antibodies

  • Consider capture ELISA approaches using anti-IgG or anti-IgM as the primary coating antibody

  • For IgG subclass determination, use specific mouse peroxidase-conjugated anti-human IgG1, IgG2, IgG3, or IgG4 secondary antibodies at appropriate dilutions (e.g., 1/500 for IgG1 and IgG2, 1/250 for IgG3 and IgG4)

  • For light chain determination, use polyclonal antibodies against human κ and λ light chains at appropriate dilutions (e.g., 1/1,000)

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