AHL23 Antibody

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Description

Product Overview

The AHL23 Antibody (Product Code: CSB-PA210817XA01DOA) is a polyclonal antibody developed against the Arabidopsis thaliana (Mouse-ear cress) AHL23 protein. It is commercially available in two sizes (2 ml or 0.1 ml) and targets the protein encoded by the Uniprot accession O23620 .

ParameterSpecification
Target ProteinAHL23 (AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 23)
Host SpeciesArabidopsis thaliana (Mouse-ear cress)
Uniprot IDO23620
Antibody TypePolyclonal
ApplicationsNot explicitly stated in available sources
Validation DataNo direct validation data reported in reviewed sources

Biological Context of AHL Proteins in Arabidopsis

AHL (AT-HOOK MOTIF NUCLEAR LOCALIZED) proteins are plant-specific transcription factors involved in regulating growth, development, and stress responses. While AHL23 itself is not discussed in the provided research articles, related AHL family members (e.g., AHL9, AHL27) are implicated in chromatin remodeling and gene expression modulation .

Research Findings and Applications

  • Antibody Validation Practices: Large-scale databases like the Validated Antibody Database (VAD) emphasize the importance of knockout studies and orthogonal validation methods (e.g., siRNA, GFP-tagged proteins) .

  • General AHL Research: Studies on other AHL antibodies (e.g., anti-AHL9, anti-AHL27) highlight their use in chromatin immunoprecipitation (ChIP) and protein localization assays in plant models .

Limitations and Future Directions

  • Data Gaps: No functional studies or validation data (e.g., Western blot, immunofluorescence) for AHL23 Antibody are available in the reviewed sources.

  • Research Opportunities: Future work could explore its utility in studying AHL23’s role in plant development or stress responses, leveraging techniques like ChIP-seq or CRISPR knockout lines.

References to Antibody Validation Resources

For rigorous validation, researchers are advised to consult:

  • The Human Protein Atlas: Provides standardized validation protocols, including genetic and orthogonal methods .

  • Validated Antibody Database (VAD): Aggregates antibody applications from 56,635 publications, though AHL23 is not currently listed .

Product Specs

Buffer
Preservative: 0.03% ProClin 300; Constituents: 50% Glycerol, 0.01M Phosphate-Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
14-16 weeks lead time (made-to-order)
Synonyms
AHL23 antibody; At4g17800 antibody; dl4935c antibody; FCAALL.129 antibody; AT-hook motif nuclear-localized protein 23 antibody
Target Names
AHL23
Uniprot No.

Target Background

Function
AHL23 Antibody targets a transcription factor that exhibits specific binding affinity for AT-rich DNA sequences associated with nuclear matrix attachment regions (MARs).
Database Links

KEGG: ath:AT4G17800

STRING: 3702.AT4G17800.1

UniGene: At.20660

Subcellular Location
Nucleus.

Q&A

Here’s a curated collection of FAQs for researchers working with the AHL23 antibody, structured to address both foundational and advanced scientific inquiries. The answers integrate methodologies, validation strategies, and analytical frameworks from peer-reviewed studies and technical guidelines.

Advanced Research Questions

How to resolve discrepancies in AHL23 binding affinity between in vitro and in vivo systems?

FactorImpactMethodological Adjustment
Serum pH (alkaline)Alters antibody-antigen interactions (e.g., anti-PGRN mAb 2B2) Repeat assays in pH-adjusted buffers.
Post-translational modificationsNative antigens may have glycosylation absent in recombinant forms Use glycoengineered cell lines for recombinant antigen production.
Ligand competitionEndogenous ligands in serum compete for binding sites Pre-clear serum with protein A/G beads pre-assay.

What computational pipelines enable de novo design of AHL23-derived antibodies?

  • AI-driven frameworks: Train models on NGS-derived VH/VL pairs (e.g., 4.25 × 10^12 combinations) to predict high-affinity binders .

  • Epitope-focused screening: Use cryo-EM or homology models (for unresolved targets) to guide in silico maturation .

  • Validation: Test top candidates in BLI/SPR and cell-based neutralization assays (e.g., SARS-CoV-2 pseudovirus) .

How to troubleshoot AHL23 cross-reactivity in multiplexed assays?

  • Epitope masking: Pre-incubate samples with non-overlapping antibodies to block shared epitopes .

  • Differential dilution: Titrate AHL23 to isolate signal thresholds for closely related isoforms .

  • Structural analysis: Perform HDX-MS to identify regions of unintended paratope flexibility .

Data Analysis & Interpretation

How to statistically validate AHL23’s binding kinetics across experimental replicates?

  • Global fitting: Apply a 1:1 binding model to SPR/BLI datasets pooled across buffer/serum conditions .

  • Error weighting: Use Bayesian inference to account for variability in low-affinity measurements (KD > 100 nM) .

What metrics define AHL23’s therapeutic potential in preclinical models?

ParameterThresholdAssay
Neutralization potencyIC50 < 50 nMLive-virus neutralization (e.g., SARS-CoV-2 variants)
DevelopabilityHMWS < 5%SEC-HPLC for aggregation propensity
Cross-reactivity<5% bindingProtein microarray screening against human proteome

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