AIM18 Antibody

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Description

Molecular Structure and Biochemical Properties

AIM18 consists of an N-terminal mitochondrial targeting sequence, a transmembrane domain, and a C-terminal CHI-like domain. Key features include:

PropertyDetails
Molecular Weight~30 kDa (monomeric form)
SolubilityRequires truncation of N-terminal domains for recombinant expression
Thermal StabilityMelting temperatures: 48–67°C (varies by construct/mutation)
Heme BindingBinds heme via CHI domain; confirmed by spectroscopy and immunoprecipitation

Recombinant AIM18-Nd70 (truncated form lacking mitochondrial targeting/transmembrane domains) exhibits high solubility (>20 mg/mL) and retains structural integrity . Mutations in the catalytic arginine residue (e.g., R123A) reduce heme binding and alter spectral properties .

Heme Protein Activity

  • AIM18 binds heme in vivo and in vitro, as demonstrated by golden coloration of purified protein and a distinct Soret peak at 420 nm .

  • Heme binding is abolished in catalytic arginine mutants, suggesting a role for this residue in ligand coordination .

Mitochondrial Localization

  • Full-length AIM18 resides on the mitochondrial inner membrane, implicating involvement in electron transport or oxidative phosphorylation .

Key Studies

  1. Heme Interaction Analysis

    • Method: Fluorescent heme detection assay using oxalic acid to release iron from heme.

    • Result: AIM18 co-immunoprecipitates with heme in yeast, confirming physiological relevance .

  2. Structural Characterization

    • Technique: Size-exclusion chromatography (SEC) and X-ray crystallography.

    • Findings:

      • AIM18-Nd70 exists as a monomer in solution .

      • Crystal structures reveal a CHI fold with an extra fungal-specific loop absent in plant CHI enzymes .

Therapeutic Implications and Future Directions

While AIM18 itself is not yet a therapeutic target, its heme-binding properties and mitochondrial association suggest potential roles in:

  • Redox Signaling: Modulation of reactive oxygen species (ROS) in cellular stress responses.

  • Metabolic Disorders: Links to mitochondrial dysfunction in diseases like neurodegeneration or cancer.

Comparative Analysis of AIM18 Antibodies

Though commercial AIM18-specific antibodies are not reported, experimental tools include:

Antibody TypeApplicationSource
Polyclonal anti-AIM18Immunoprecipitation, heme-binding assaysCustom-generated
FLAG-tagged constructsSubcellular localization studiesYeast expression systems

Challenges and Limitations

  • Solubility Issues: Full-length AIM18 requires truncation for biochemical studies, limiting native-state analyses .

  • Functional Uncertainty: The exact biological role of AIM18 remains unclear, necessitating further knockout/mutation studies.

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Composition: 50% Glycerol, 0.01M Phosphate Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
AIM18 antibody; FMP22 antibody; ABL076W antibody; Altered inheritance of mitochondria protein 18 antibody; mitochondrial antibody
Target Names
AIM18
Uniprot No.

Target Background

Database Links
Protein Families
AIM18/AIM46 family
Subcellular Location
Mitochondrion.

Q&A

What is the IL-18 pathway and what forms of IL-18 can antibodies target?

Interleukin-18 (IL-18) is an immunoregulatory cytokine that functions as a potent inducer of T helper 1 and cytotoxic responses . It exists in two main forms: an inactive precursor form and a mature, biologically active form that results from caspase cleavage. Antibodies can be designed to target either the full-length precursor IL-18 or specifically the mature form by recognizing the neoepitope created after caspase cleavage .

The IL-18 pathway is regulated by IL-18 binding protein (IL-18BP), which acts as a decoy receptor forming a high-affinity complex with IL-18 to prevent binding to cognate receptors . This natural regulatory mechanism is critical, as imbalances between IL-18 and IL-18BP can lead to excessive IL-18 signaling and systemic inflammation .

For research purposes, antibodies that can distinguish between these different forms are invaluable for investigating the specific roles of precursor versus mature IL-18 in various disease states.

How do researchers distinguish between precursor and mature IL-18 using antibodies?

Distinguishing between precursor and mature IL-18 requires specialized antibodies with different epitope recognition properties:

  • Generation of form-specific antibodies: Researchers have developed monoclonal antibodies that specifically recognize the neoepitope of caspase-cleaved mature IL-18. For example, the anti-human IL-18 neoepitope antibody (clone 9-10.2) recognizes the new N-terminal created after caspase cleavage, while other antibodies (like clone 11-4.1) recognize both the inactive precursor and mature forms .

  • Methodological approach: To effectively differentiate between these forms:

    • Use ELISA kits specifically designed to measure full-length and mature human IL-18 separately

    • Apply immunofluorescence techniques with specific antibodies

    • Perform multiple immunofluorescence staining using protocols like the Opal assay kit for co-localization studies

This distinction is particularly important in disease research, as expression patterns of precursor versus mature IL-18 can differ significantly between patient populations and may correlate with treatment responsiveness.

What are the standard validation methods for IL-18 antibodies?

Rigorous validation is essential before employing IL-18 antibodies in research. Standard validation approaches include:

  • Knockout validation: Compare antibody performance in knockout cell lines versus isogenic parental controls to confirm specificity .

  • Multiple application testing: Validate across various applications including Western blot, immunoprecipitation, and immunofluorescence using standardized experimental protocols .

  • Cross-reactivity assessment: Test against related proteins to ensure the antibody specifically binds IL-18 and not structurally similar cytokines.

  • Quantification methods: Use image analysis software like ImageJ to quantify stained areas in immunofluorescence studies .

  • Epitope verification: Confirm epitope recognition properties through competitive binding assays or epitope mapping.

Proper validation increases experimental reproducibility and enables researchers to select antibodies most appropriate for their specific research questions.

How are IL-18 antibodies used to study inflammatory diseases?

IL-18 antibodies are powerful tools for investigating inflammatory conditions, particularly those where cytokine dysregulation plays a central role:

  • Crohn's disease research: Anti-mature IL-18 antibodies have been used to study differences between patients responsive and non-responsive to biological therapies. Research has shown that precursor and mature IL-18 expression is upregulated in patients with Crohn's disease who are unresponsive to biological therapies, and serum levels of mature IL-18 were significantly higher in non-responders compared to responders .

  • Experimental colitis models: Administration of anti-mature IL-18 antibodies in acute colitis mouse models has demonstrated therapeutic potential by:

    • Ameliorating induced colitis

    • Repairing goblet cell function

    • Restoring the protective mucus layer

  • Macrophage activation syndrome (MAS): Studies have shown that IL-18BP knockout mice experience exacerbated severity of CpG-induced MAS, highlighting the importance of IL-18/IL-18BP balance in regulating inflammation .

  • Tissue analysis techniques: Multiple immunofluorescence staining can be used to assess IL-18 expression in various cell types, such as using CD68 antibodies to identify macrophages co-expressing IL-18 .

These approaches enable researchers to evaluate both the expression patterns of IL-18 in disease tissues and the potential therapeutic effects of IL-18 pathway modulation.

What methodological considerations are important when measuring IL-18 in patient samples?

When measuring IL-18 in patient samples, researchers should consider several methodological factors:

  • Form-specific quantification: Use appropriate ELISA kits to measure full-length and mature IL-18 separately. For example, researchers have used specialized ELISA kits (#7620; MBL, Nagoya, Japan; #E-I-002 mAbProtein, Shimane, Japan) that can differentiate between forms .

  • Sample standardization: Calculate concentrations using standard curves to ensure accuracy and comparability across different patient samples .

  • Clinical correlation analysis: Correlate IL-18 measurements with clinical parameters such as:

    • Disease activity indices (e.g., CDAI scores in Crohn's disease)

    • Response to therapy

    • Laboratory markers like hematocrit levels

  • Paired tissue-serum analysis: When possible, analyze both serum concentrations and tissue expression patterns to provide a more comprehensive understanding of IL-18's role in the disease state.

  • Statistical considerations: Account for potential confounding factors and ensure appropriate statistical analysis when comparing IL-18 levels between different patient groups.

These methodological considerations help ensure that IL-18 measurements provide meaningful and reproducible insights into disease pathophysiology.

How can researchers optimize antibody selection for specific IL-18 research applications?

Selecting the optimal antibody for specific IL-18 research applications requires consideration of several factors:

This systematic approach to antibody selection enhances experimental reproducibility and data quality.

What computational approaches can advance IL-18 antibody development?

Computational methods are increasingly important for antibody development and optimization:

  • Deep learning applications: Recent advances in deep learning applied to biological sequences and structures have shown promise as in silico screening tools for antibody discovery. These methods can:

    • Learn from evolutionary scale data

    • Predict effects of mutations on antibody properties including binding affinity, stability, and developability

  • Multi-objective optimization: Computational approaches can balance multiple objectives in antibody design:

    • Extrinsic fitness (e.g., binding quality to the target)

    • Intrinsic fitness (thermostability, developability, stability)

    • Sequence diversity

  • Integer linear programming (ILP): This approach combines deep learning with constrained optimization to:

    • Generate diverse antibody libraries

    • Provide explicit control over diversity parameters

    • Balance fitness and diversity requirements

  • In silico deep mutational scanning: Machine learning models can compute in silico deep mutational scanning data to predict the impact of specific mutations without requiring extensive experimental validation .

  • Cold-start library design: For rapid response scenarios against new targets or variants, computational methods can design effective starting libraries without prior experimental or computational fitness data .

These computational approaches can significantly accelerate antibody development while reducing experimental costs and enhancing the probability of success.

How are multiple immunofluorescence techniques applied to study IL-18 in tissue samples?

Advanced immunofluorescence techniques provide powerful tools for studying IL-18 in complex tissue environments:

  • Opal assay methodology: This technique enables multiple immunofluorescence staining on the same tissue section. For IL-18 research, this approach has been used to:

    • Simultaneously detect CD68 (macrophage marker) with anti-full-length and anti-mature IL-18 antibodies

    • Visualize co-expression using spectrally distinct fluorophores (Opal570 and Opal520)

    • Follow manufacturer recommendations for optimal results (e.g., NEL810001KT, Akoya Biosciences)

  • Staining protocol optimization:

    • Primary antibody incubation at 4°C for 16 hours

    • Use of appropriate Alexa Fluor-conjugated secondary antibodies

    • Mounting with 4′,6-diamidino-2-phenylindole Fluoromount-G

    • Addition of coverslips for optimal imaging

  • Quantitative analysis:

    • Use of ImageJ software for objective quantification of stained areas

    • Comparison between different patient groups or experimental conditions

  • Co-localization studies: These techniques enable researchers to determine which specific cell types express IL-18 in disease tissues, providing insights into the cellular sources of IL-18 in different pathological states.

These advanced immunofluorescence approaches provide spatial and cellular context to IL-18 expression patterns, complementing quantitative measurements from techniques like ELISA.

How do IL-18 antibodies contribute to understanding treatment resistance in inflammatory diseases?

IL-18 antibodies have provided crucial insights into mechanisms of treatment resistance:

  • Biomarker identification in Crohn's disease: Studies using specific IL-18 antibodies have shown that:

    • Patients refractory to TNF-α antibody therapy who were non-responsive to ustekinumab (anti-IL-12/23) had significantly higher baseline serum levels of IL-18 and mature IL-18 compared to responders

    • This difference existed despite non-responders having lower disease activity indices (CDAI scores)

  • Differential cytokine profiles: Unlike IL-18, TNF-α levels were not significantly different between responder and non-responder groups, suggesting IL-18 may be a specific marker for treatment resistance .

  • Tissue-specific expression patterns: Beyond serum measurements, immunofluorescence studies of colon tissues have revealed differential expression patterns of precursor and mature IL-18 in treatment-resistant patients .

  • Goblet cell function correlation: IL-18 antibody studies have demonstrated impaired goblet cell function in treatment-resistant patients, suggesting a potential mechanism connecting IL-18 dysregulation to mucosal barrier dysfunction .

These findings suggest that IL-18-targeted therapies may represent alternative treatment options for patients resistant to current biological therapies, and that IL-18 measurements could help predict treatment response.

What experimental models are used to evaluate IL-18 antibody therapeutic efficacy?

Several experimental models have been developed to evaluate the therapeutic potential of IL-18 antibodies:

  • Acute colitis mouse model: This model has been used to assess the effects of anti-mature IL-18 monoclonal antibodies on:

    • Disease activity index

    • Body weight loss

    • Tissue pathology

    • Proinflammatory cytokine expression

    • Goblet cell function

    • Microbiota composition

  • IL-18BP knockout models: Studies in IL-18BP knockout mice have demonstrated exacerbated severity of CpG-induced macrophage activation syndrome (MAS), highlighting the importance of IL-18/IL-18BP balance in inflammatory conditions .

  • Comparative antibody assessment: Different anti-IL-18 antibody clones can be compared to evaluate their relative efficacy in disease models, providing insights into which epitopes or binding characteristics correlate with therapeutic potential.

  • Mechanism investigation: These models allow researchers to investigate the specific mechanisms through which IL-18 antibodies exert their effects, such as:

    • Repair of goblet cell function

    • Restoration of the mucus layer

    • Reduction of proinflammatory cytokine expression

These experimental approaches are essential for translating basic IL-18 biology into potential therapeutic applications and for understanding the complex interactions between IL-18 signaling and disease pathophysiology.

How might next-generation antibody engineering improve IL-18-targeted therapies?

Emerging antibody engineering approaches offer promising avenues for enhancing IL-18-targeted therapeutics:

  • Computational optimization: Advanced computational methods combining deep learning with multi-objective optimization can generate antibodies with improved:

    • Target specificity

    • Stability

    • Developability

    • Reduced immunogenicity

  • Diversity-focused library design: Novel approaches like integer linear programming (ILP) can create antibody libraries with:

    • Explicit control over diversity parameters

    • Balance between multiple fitness objectives

    • Optimized properties predicted by machine learning models

  • Structure-guided engineering: Leveraging detailed structural information about IL-18 and its interactions with receptors and IL-18BP to design antibodies that:

    • Target specific epitopes involved in receptor binding

    • Achieve higher specificity for mature versus precursor IL-18

    • Modulate rather than completely block IL-18 activity

  • Bispecific approaches: Development of bispecific antibodies that simultaneously target IL-18 and other inflammatory mediators to address the complex inflammatory environment in diseases like Crohn's disease.

  • Tissue-targeted delivery: Engineering antibodies with enhanced tissue penetration or tissue-specific targeting to improve efficacy in specific disease sites while minimizing systemic effects.

These advanced engineering approaches may lead to next-generation IL-18-targeted therapies with improved efficacy and safety profiles.

What are the methodological challenges in addressing contradictory IL-18 antibody results?

Researchers often encounter contradictory results when working with IL-18 antibodies. Addressing these challenges requires systematic methodological approaches:

  • Antibody characterization standardization: Following standardized protocols for antibody validation across different applications (Western blot, immunoprecipitation, immunofluorescence) to ensure reproducibility .

  • Clone-specific performance documentation: Thoroughly documenting performance differences between antibody clones, as different clones may recognize different epitopes or perform differently across applications .

  • Form-specific detection: Ensuring proper distinction between precursor and mature IL-18 by using appropriate form-specific antibodies, as mixed detection can lead to contradictory findings .

  • Knockout validation: Using knockout cell lines and isogenic parental controls to definitively establish antibody specificity and eliminate false positive signals .

  • Multi-objective evaluation: Recognizing that optimizing antibodies for one property (e.g., binding affinity) may come at the expense of other important properties (e.g., stability), necessitating comprehensive characterization .

  • Experimental context documentation: Thoroughly documenting experimental conditions, as factors like tissue preparation, fixation methods, and antigen retrieval techniques can significantly impact antibody performance.

By addressing these methodological challenges, researchers can enhance the reproducibility and reliability of IL-18 antibody research, leading to more consistent and translatable findings.

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