AKR1A1 is encoded by the AKR1A1 gene located on chromosome 1p34.1, spanning 10 exons and producing a 325-amino-acid protein (36573 Da) with a β/α-barrel tertiary structure . Key structural and functional features include:
AKR1A1 participates in multiple metabolic and detoxification pathways:
Aldehyde Detoxification: Reduces toxic aldehydes (e.g., 4-hydroxynonenal, methylglyoxal) generated during oxidative stress or lipid peroxidation .
Drug Metabolism:
Ascorbate Synthesis: Converts glucuronate to gulonate in mice (vitamin C synthesis) .
Oxidative Stress Mitigation: Reduces reactive oxygen species (ROS) in diabetic kidney disease (DKD) .
AKR1A1 regulates pathways critical to cellular homeostasis:
AKR1A1 is implicated in diverse pathologies, with dual protective and pathological roles:
Oncogenic Potential: Overexpression in cancers (e.g., lymphoma, breast cancer) linked to procarcinogen activation .
Protective Effects: Allelic variants with reduced activity may predict DAUN-induced cardiotoxicity .
Downregulation in DKD: AKR1A1 protein levels are significantly lower in DKD patients vs. controls (log2FC = -0.61, FDR = 0.029) .
Pathway Dysregulation:
Alcohol-Induced Liver Damage: Akr1a1 knockout mice show increased oxidative stress (4-HNE accumulation) and fibrosis .
Drug-Induced Toxicity: Protects against acetaminophen/CCl4-induced injury via ROS scavenging .
c.753G > A Variant: Causes exon 8 skipping, truncating the protein and abolishing enzymatic activity (glucuronate accumulation) .
Akr1a1 Knockout Mice:
MAASCVLLHT GQKMPLIGLG TWKSEPGQVK AAVKYALSVG YRHIDCAAIY GNEPEIGEAL KEDVGPGKAV PREELFVTSK LWNTKHHPED VEPALRKTLA DLQLEYLDLY LMHWPYAFER GDNPFPKNAD GTICYDSTHY KETWKALEAL VAKGLVQALG LSNFNSRQID DILSVASVRP AVLQVECHPY LAQNELIAHC QARGLEVTAY SPLGSSDRAW RDPDEPVLLE EPVVLALAEKYGRSPAQILL RWQVQRKVIC IPKSITPSRI LQNIKVFDFT FSPEEMKQLN ALNKNWRYIV PMLTVDGKRV PRDAGHPLYP FNDPY
AKR1A1 catalyzes the NADPH-dependent reduction of a wide variety of carbonyl-containing compounds to their corresponding alcohols. It displays enzymatic activity towards endogenous metabolites such as aromatic and aliphatic aldehydes, ketones, monosaccharides, and bile acids, with a notable preference for negatively charged substrates including glucuronate and succinic semialdehyde. The enzyme functions primarily as a detoxifying agent by reducing toxic aldehydes including methylglyoxal and 3-deoxyglucosone, compounds that accumulate under hyperglycemic conditions .
Research using protein interaction databases reveals that AKR1A1 forms functional partnerships with several key proteins involved in aldehyde metabolism. The most significant interactions include:
Protein Partner | Full Name | Interaction Score |
---|---|---|
MIOX | Myo-inositol oxygenase | 0.968 |
ALDH3A2 | Aldehyde dehydrogenase family 3 member A2 | 0.957 |
ALDH9A1 | 4-trimethylaminobutyraldehyde dehydrogenase | 0.949 |
ALDH3B1 | Aldehyde dehydrogenase family 3 member B1 | 0.948 |
These interactions suggest AKR1A1 functions within a network of enzymes involved in detoxification pathways and aldehyde metabolism .
For high-quality recombinant expression of AKR1A1, the intein strategy has proven particularly effective. This method involves expressing AKR1A1 as a thioester, which can then be selectively modified through expressed protein ligation techniques. For optimal results, researchers should utilize bacterial expression systems (typically E. coli BL21 strains) with temperature-controlled induction protocols to maximize protein solubility. Purification should employ affinity chromatography followed by size exclusion chromatography to ensure enzyme homogeneity. Activity assays using model substrates should be performed immediately after purification to confirm functional integrity .
Site-specific immobilization dramatically improves AKR1A1 performance compared to random immobilization methods. The most effective approach utilizes expressed protein ligation methodology, where AKR1A1 is recombinantly expressed as a thioester via the intein strategy. The thioester can then be selectively modified with a biotin label through expressed protein ligation and subsequently immobilized on streptavidin templates. This method produces remarkably improved enzymatic activity comparable to the wild-type enzyme in solution and 60–300-fold greater than randomly immobilized enzymes. Furthermore, the site-specifically immobilized enzyme demonstrates exceptional stability, with no activity loss observed for over a week and more than 35% activity maintained even after 50 days .
AKR1A1 functions as a master metabolic regulator during mesenchymal stem cell (MSC) differentiation, with differential expression patterns that determine cell fate. The enzyme's activity creates a metabolic switch between glycolysis and oxidative phosphorylation pathways:
Marker | Osteoblast-committed MSCs | Adipocyte-committed MSCs |
---|---|---|
AKR1A1 expression | Decreased | Increased |
PKM2 activity | Decreased | Increased |
Lactate production | Decreased | Increased |
PGC-1α expression | Increased | Decreased |
SIRT1 pathway | Activated | Inhibited |
Energy metabolism | Oxidative phosphorylation | Glycolysis |
This metabolic reprogramming is central to determining whether MSCs differentiate into osteoblasts or adipocytes, with AKR1A1 promoting adipogenesis while inhibiting osteogenesis .
AKR1A1 regulates MSC differentiation through a molecular cascade involving the SIRT1-PGC-1α-TAZ axis. In adipocyte-committed MSCs, increased AKR1A1 expression inhibits the SIRT1-dependent pathway, resulting in decreased expression of PGC-1α and TAZ while increasing PPARγ. This promotes glycolytic metabolism that favors adipogenesis. Conversely, in osteoblast-committed cells, reduced AKR1A1 expression relieves its inhibitory effect on SIRT1, enabling SIRT1-mediated activation of PGC-1α and TAZ, which facilitates osteogenesis and mitochondrial oxidative phosphorylation. These findings establish AKR1A1 as a key upstream regulator of metabolic pathways that determine stem cell fate .
Multiomics analyses have identified AKR1A1 as a significant biomarker for diabetic kidney disease (DKD), the leading cause of end-stage kidney disease. By integrating single-cell RNA-sequencing data from the Kidney Precision Medicine Project, proteomics of human kidney cortex biopsies, protein quantitative trait loci, genome-wide association study results, and plasma metabolomics, researchers revealed AKR1A1 as a molecular hub for DKD cellular dysfunction. Specifically, differential expression analysis identified 790 differentially expressed genes in proximal tubule cells, with AKR1A1 emerging as a central node in several cross-linked pathways characterized by deficiency of this enzyme. The findings suggest that impaired AKR1A1 function contributes to the metabolic dysregulation observed in diabetic kidney disease .
A silent variant of AKR1A1, c.753G > A (rs745484618, p. Arg251Arg) located at the first position of exon 8, has been linked to schizophrenia through a mechanism involving exon skipping. This variant leads to a loss of gene expression and enzymatic activity, resulting in the accumulation of glucuronate (GlucA) in serum. Elevated GlucA levels are significant in treatment-resistant schizophrenia because GlucA promotes drug excretion by forming conjugates with medications, potentially reducing their therapeutic efficacy. The genetic loss of AKR1A1 function thus provides a mechanistic explanation for both biochemical abnormalities in schizophrenia and the reduced effectiveness of antipsychotic medications in certain patients .
AKR1A1 plays complex roles in cancer development and progression. Several AKRs, including AKR1A1, are involved in tobacco-carcinogenesis while simultaneously catalyzing the detoxification of nicotine-derived nitrosamino ketones. This dual function highlights the context-dependent nature of AKR1A1's effects in different tissues and cancer types. Additionally, the enzyme's role in detoxifying reactive aldehydes suggests it may influence cellular responses to oxidative stress, a key factor in cancer development. Research into AKR1A1 expression patterns in different tumor types and its interactions with carcinogens and chemotherapeutic agents is essential for understanding its contribution to cancer biology and potential as a therapeutic target .
Multi-omics approaches offer powerful frameworks for investigating AKR1A1's role in complex diseases. Such methodologies involve:
Transcriptomics: Single-cell RNA-sequencing to identify cell-type-specific expression patterns of AKR1A1 and co-regulated genes
Proteomics: Mass spectrometry analysis of tissue samples to quantify AKR1A1 protein levels and post-translational modifications
Metabolomics: Identification of AKR1A1 substrates and products in biological samples
Genomics: Analysis of genetic variants affecting AKR1A1 expression or function
Integration: Computational methods to correlate findings across multiple datasets
This integrated approach has successfully identified AKR1A1 as a biomarker for diabetic kidney disease, revealing it as a hub in multiple disease-associated pathways. Similar strategies could uncover AKR1A1's role in other conditions and guide the development of targeted therapeutics .
AKR1A1 inhibition represents a promising therapeutic approach for conditions characterized by excessive bone marrow adipogenesis and bone loss, such as senile osteoporosis. The GSNOR inhibitor N6022 has been investigated for its ability to inhibit AKR1A1 and potentially reverse pathological adipo-osteogenic differentiation of bone marrow stem cells. By suppressing AKR1A1 activity, such inhibitors could relieve the enzyme's inhibition of the SIRT1-dependent pathway, thereby increasing PGC-1α and TAZ expression to promote osteogenesis while suppressing adipogenesis. Therapeutic development should focus on optimizing selectivity, bioavailability, and tissue distribution of AKR1A1 inhibitors while monitoring potential off-target effects on related AKR family members .
AKR1A1 contributes to detoxification of endogenous and exogenous compounds across multiple tissues. The enzyme catalyzes the reduction of various toxic aldehydes, including those generated during lipid peroxidation and glycation reactions. In the liver, AKR1A1 participates in aldehyde detoxification pathways alongside aldehyde dehydrogenases. In the kidney, it contributes to the metabolism of glucuronate and may influence drug clearance. The tissue-specific expression patterns of AKR1A1 correlate with detoxification requirements, with higher expression in metabolically active tissues exposed to xenobiotics. Research methods to study tissue-specific functions include tissue-specific knockout models, ex vivo tissue slice cultures, and targeted proteomics to quantify AKR1A1 abundance across different organs and cell types .
Aldo-Keto Reductase Family 1 Member A1 (AKR1A1), also known as aldehyde reductase, is a member of the aldo-keto reductase (AKR) superfamily. This enzyme is ubiquitously expressed in various tissues, including the liver, kidney, and pancreas. AKR1A1 plays a crucial role in the detoxification of aldehydes and ketones, converting them into their corresponding alcohols using NADPH as a cofactor .
The AKR1A1 gene is located on chromosome 1 at the position 1p34.1 and consists of 10 exons . The protein encoded by this gene is a monomeric oxidoreductase that participates in the reduction of a wide range of substrates, including aromatic and aliphatic aldehydes . The enzyme’s structure allows it to catalyze the reduction of mevaldate to mevalonic acid and glyceraldehyde to glycerol .
AKR1A1 is involved in several biological processes, including:
Mutations in the AKR1A1 gene have been associated with various diseases, including non-Hodgkin’s lymphoma . Additionally, AKR1A1 has been found to exert a protective function in alcohol-associated liver disease (ALD) by reducing the accumulation of 4-HNE, a toxic aldehyde, and inhibiting p53 activation . This protective role highlights the enzyme’s importance in mitigating oxidative stress and inflammation in the liver.