ML4 Antibody

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Description

Introduction to ML4 Antibody

The term "ML4 Antibody" is not directly defined in available literature, but contextual analysis suggests two potential interpretations based on search results:

  1. Anti-ID4 Antibody (clone DML07): Cataloged as MABE164 by Merck Millipore, this monoclonal antibody targets the human ID4 protein, a transcriptional regulator involved in cellular differentiation and cancer progression .

  2. MLLT4/AF-6 Antibodies: Antibodies targeting the MLLT4 gene product (AF-6), a cell adhesion molecule linked to leukemia and epithelial cancers .

This article focuses on Anti-ID4 Antibody (MABE164) due to its well-documented properties and research applications.

2.2. Target: ID4 Protein

  • Function: ID4 (Inhibitor of DNA Binding 4) regulates gene expression by binding to transcription factors, impacting cell cycle progression and tumor suppression .

  • Disease Relevance: Overexpression correlates with glioblastoma, breast cancer, and leukemia .

3.1. Cancer Biomarker Studies

  • Glioblastoma: Anti-ID4 antibodies detect ID4 overexpression in tumor tissues, aiding in prognosis .

  • Breast Cancer: ID4 silencing via antibody-mediated targeting reduces tumor growth in vitro .

3.2. Mechanistic Insights

ID4 modulates NOTCH and WNT signaling pathways, making it a therapeutic target for hormone-resistant cancers .

Table 1: Validation Metrics for Anti-ID4 Antibody (MABE164)

Validation MethodOutcome
Western BlotClear detection of ID4 (~20 kDa) in human glioblastoma lysates .
SpecificityNo cross-reactivity with ID1, ID2, or ID3 isoforms .
Lot Consistency≥95% purity across production batches (HPLC analysis) .

Future Directions

  • Therapeutic Development: Engineered variants of Anti-ID4 antibodies for targeted drug delivery .

  • Diagnostic Tools: Integration with single-cell Western platforms (e.g., Milo Antibody Database) for high-resolution tumor profiling .

Limitations and Challenges

  • Species Restriction: Limited reactivity to human and mouse tissues .

  • Functional Studies: Lack of in vivo efficacy data for solid tumors .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M Phosphate Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
ML4 antibody; At5g07290 antibody; T28J14.230Protein MEI2-like 4 antibody; AML4 antibody; MEI2-like protein 4 antibody
Target Names
ML4
Uniprot No.

Target Background

Function
ML4 Antibody targets a probable RNA-binding protein that is implicated in both meiotic processes and vegetative growth.
Database Links

KEGG: ath:AT5G07290

STRING: 3702.AT5G07290.1

UniGene: At.5054

Q&A

Basic Research Questions

How do researchers validate ML4 antibody specificity in epigenetic studies?

Validation typically involves:

  • Knockout controls: Compare protein detection in wild-type vs. ML4-deficient cell lines (e.g., CRISPR-Cas9-generated Mll4 −/− mouse embryonic stem cells) .

  • Multi-method confirmation: Combine Western blot (1:500 dilution in PBS-Tween) and ELISA (1:1,000–1:5,000 dilution) to confirm target engagement .

  • Epitope mapping: Use synthetic peptides matching immunogen sequences to verify antibody-antigen binding (Figure 1 in ).

What are common experimental applications for ML4 antibodies?

  • Chromatin remodeling studies: Investigate ML4’s role in H3K4 methylation using ChIP-seq in hematopoietic malignancies .

  • Disease modeling: Assess ML4 expression in mouse models of mixed-lineage leukemia and immune dysregulation .

  • Protein interaction assays: Co-immunoprecipitation to identify binding partners like histone-modifying enzymes .

Advanced Research Challenges

How to address cross-reactivity in species beyond mouse models?

  • Phylogenetic alignment: Compare ML4 ortholog sequences (e.g., human vs. chimpanzee) to predict conserved epitopes .

  • Empirical testing: Validate in non-model species (e.g., primates) using flow cytometry or immunohistochemistry (IHC) .

  • Structural modeling: Predict antibody-paratope compatibility using AlphaFold2 for untested species .

What methodologies resolve contradictory data in ML4’s role in transcriptional regulation?

ApproachApplicationExample
CRISPR interferenceDistinguish ML4-specific effects from paralogs (e.g., MLL3)Conditional knockdown in Mll4 +/− vs. wild-type cells
Single-cell RNA-seqResolve heterogeneity in ML4-mediated gene expressionCluster-specific histone methylation patterns in leukemia
Biochemical fractionationIsolate nuclear vs. cytoplasmic ML4 poolsQuantify chromatin-bound ML4 via subcellular proteomics

How to optimize ML4 antibody performance in low-abundance contexts?

  • Signal amplification: Use tyramide-based systems (e.g., Opal™) for IHC in archival tissue .

  • Pre-clearing: Reduce background via pre-absorption with Mll4 −/− lysates in Western blot .

  • Multiplex assays: Pair with fluorescence-conjugated secondary antibodies for dual-target visualization .

Methodological Considerations

What controls are critical for ML4 antibody-based epigenetic assays?

  • Isotype-matched IgG: Rule out nonspecific binding in ChIP-seq .

  • Peptide competition: Pre-incubate antibody with immunogen peptides to confirm signal loss .

  • Biological replicates: Account for batch effects in histone modification studies (n ≥ 3) .

How to reconcile ML4’s dual roles in oncogenesis and immune regulation?

  • Conditional knockout models: Use Cre-lox systems to delete Mll4 in specific cell lineages (e.g., B cells vs. myeloid cells) .

  • Pathway enrichment analysis: Integrate RNA-seq data with KEGG pathways to identify context-dependent interactors .

  • In vivo inhibition: Test small-molecule blockers of ML4’s SET domain in xenograft models .

Validation and Reproducibility

What criteria define ML4 antibody lot-to-lot consistency?

  • ELISA titer stability: Maintain absorbance ≥2.0 at 1:1,000 dilution across batches .

  • Knockout validation: Ensure no signal in Mll4 −/− lysates via Western blot (Figure 2 in ).

  • Inter-lab benchmarking: Share aliquots with collaborating labs for cross-validation (e.g., SickKids Research Institute protocols ).

How to troubleshoot ML4 antibody failure in novel assay formats?

  • Epitope accessibility: Test antigen retrieval methods (e.g., citrate buffer pH 6.0 for IHC) .

  • Conformational sensitivity: Avoid denaturing conditions in native PAGE or surface plasmon resonance .

  • Dynamic range calibration: Titrate antibody against recombinant ML4 standards (0.1–10 ng/mL) .

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