PHT4;4 Antibody

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Description

Antibody Development and Specificity

The PHT4;4 antibody is a polyclonal antibody generated against a peptide derived from the Arabidopsis PHT4;4 protein (UniProt ID: Q9SXZ2). Key characteristics include:

  • Immunogen: A KLH-conjugated peptide sequence unique to PHT4;4 .

  • Host Species: Typically raised in rabbits or goats .

  • Specificity: Validated against multiple PHT4 family members (PHT4;3, PHT4;5, PHT4;6) to confirm no cross-reactivity .

  • Purification: Affinity-purified using the immunogen peptide .

Validation Methods:

  • Western Blot: Detects a single band at ~35 kDa in chloroplast envelope fractions, consistent with PHT4;4’s predicted molecular weight .

  • Immunofluorescence: Localizes PHT4;4 to chloroplast envelope membranes, distinct from thylakoid markers like LHC2 .

Applications in Research

The PHT4;4 antibody has been pivotal in elucidating the protein’s role in chloroplast function:

Protein Localization

  • Subcellular Targeting: Confirmed PHT4;4 localization to chloroplast envelope membranes using immunofluorescence and colocalization with TIC40 (envelope marker) .

  • Tissue Specificity: Higher expression in palisade mesophyll chloroplasts compared to spongy tissue .

Functional Studies

  • Knockout Mutants: Antibody-based Western blotting confirmed the absence of PHT4;4 in atpht4;4 mutants (e.g., pht4;4-1, pht4;4-2) .

  • Ascorbate Transport: Demonstrated reduced ascorbate levels in chloroplasts of mutants, linking PHT4;4 to photoprotection .

Key Research Findings

Studies using the PHT4;4 antibody have revealed:

  1. Role in Stress Responses:

    • PHT4;4 is critical for dissipating excess light energy via ascorbate transport, preventing photoinhibition .

    • Mutants show impaired non-photochemical quenching (NPQ) and increased reactive oxygen species (ROS) under high light .

  2. Nutrient Signaling:

    • PHT4;4 interacts with transcription factors (e.g., bZIP58) to maintain photosynthesis gene expression under iron-phosphorus deficiency .

Table 1: Antibody Characteristics

PropertyDetail
TargetArabidopsis thaliana PHT4;4 (AT4G00370)
Host SpeciesRabbit/Goat
ClonalityPolyclonal
ImmunogenKLH-conjugated peptide (C-terminal region)
ReactivityChloroplast envelope membrane
ApplicationsWestern blot (1:1,000), Immunofluorescence
Molecular Weight (Obs.)~35 kDa

Table 2: Research Applications

Study FocusMethod UsedKey FindingSource
LocalizationImmunofluorescenceEnvelope-specific, distinct from LHC2
Knockout ValidationWestern BlotNo PHT4;4 detected in pht4;4 mutants
Stress ResponseROS MeasurementHigher ROS in mutants under high light

Product Specs

Buffer
Preservative: 0.03% ProClin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
14-16 week lead time (made-to-order)
Synonyms
PHT4;4 antibody; ANTR2 antibody; At4g00370 antibody; A_IG005I10_nn antibody; F5I10.7Ascorbate transporter antibody; chloroplastic antibody; Phosphate transporter PHT4;4 antibody; AtPHT4;4 antibody; Probable anion transporter 2 antibody
Target Names
PHT4;4
Uniprot No.

Target Background

Function

This antibody targets PHT4;4, an inorganic phosphate and probable anion transporter. Specifically, it functions as an ascorbate transporter across the chloroplast envelope membrane, facilitating the movement of ascorbate from the cytosol into the chloroplast. Its activity is dependent on chloride ions and the presence of a transmembrane electrochemical potential.

Gene References Into Functions

References:

  1. AtPHT4;4, a chloroplast envelope ascorbate transporter, may be crucial for tolerance to high-light stress. PMID: 25557369
Database Links

KEGG: ath:AT4G00370

STRING: 3702.AT4G00370.1

UniGene: At.34569

Protein Families
Major facilitator superfamily, Sodium/anion cotransporter (TC 2.A.1.14) family
Subcellular Location
Plastid, chloroplast inner membrane; Multi-pass membrane protein.
Tissue Specificity
Expressed in stems, developing siliques, leaf mesophyll cells and sepals of mature flowers. Not detected in roots. Detected in palisade tissue rather than spongy tissue from the leaves.

Q&A

What are PF4/heparin antibodies and how do they relate to HIT?

PF4/heparin antibodies are immunoglobulin G (IgG) antibodies that form immune complexes with platelet factor 4 (PF4) and heparin. These antibodies play a central role in heparin-induced thrombocytopenia (HIT), an adverse reaction to heparin administration. The formation of antibody-PF4/heparin immune complexes leads to platelet activation, which can result in thrombocytopenia and, paradoxically, thrombosis. Early diagnosis and appropriate treatment are crucial as HIT can be associated with significant morbidity and sometimes death .

How is the 4Ts scoring system used in HIT diagnosis?

The 4Ts scoring system is a clinical pretest evaluation tool that classifies patients into three probability categories for HIT:

  • Low probability (score 0-3)

  • Intermediate probability (score 4-5)

  • High probability (score ≥6)

The score evaluates four key clinical features: degree of Thrombocytopenia, Timing of platelet count fall, presence of Thrombosis, and absence of oTher causes of thrombocytopenia. Studies have shown that the 4Ts system has an excellent negative predictive value (98%) in the low probability group, though its positive predictive value is limited in intermediate (0.14) and high (0.64) probability groups .

What are the main immunoassay methods for detecting PF4/heparin antibodies?

Several immunoassay (IA) methods are available for detecting PF4/heparin antibodies, each with distinct characteristics:

  • Enzyme-linked immunosorbent assay (ELISA): Traditional method with high sensitivity (>99%) but lower specificity (30-70%); turnaround time approximately 3 hours .

  • Chemiluminescent immunoassay (CLIA): Automated assay using PF4 bound to polyvinyl-sulfonate particles; offers rapid results with quantitative output measured in relative light units .

  • Latex immunoassay (LIA): Rapid automated assay with quantitative results .

  • Particle-gel immunoassay (PaGIA): Semi-quantitative method requiring technician-dependent optical reading .

  • Lateral-flow immunoassay (LFIA): Point-of-care test, though research shows limitations when using frozen plasma samples .

What is the recommended approach for interpreting PF4/heparin antibody test results?

Interpretation of PF4/heparin antibody test results should follow a Bayesian approach that combines clinical probability assessment with laboratory findings. For PF4 ELISA tests, results are typically categorized as:

  • Negative: Optical density (OD) 0-0.4

  • Weakly positive: OD 0.4-0.99

  • Strongly positive: OD ≥1.0

Research suggests that higher OD values (>1.0) correlate better with functional assays and are more likely to represent true positive results. In patients with a low 4Ts score, a negative PF4 ELISA result essentially rules out HIT (negative predictive value 98%). Conversely, even with positive immunoassay results, confirmation with functional assays like serotonin release assay (SRA) may be necessary, especially in intermediate probability cases .

How do diagnostic algorithms combine clinical assessment and laboratory testing for optimal HIT diagnosis?

Advanced diagnostic algorithms for HIT integrate clinical probability assessment with sequential or simultaneous immunoassay testing. The "Lausanne algorithm" represents one such approach, combining:

  • Initial assessment using the 4Ts score to establish clinical probability

  • First-line testing with CLIA (HemosIL AcuStar HIT-IgG)

  • Second-line testing with PaGIA for cases not definitively resolved by steps 1 and 2

This algorithm can predict or exclude HIT in approximately 97% of cases with a laboratory turnaround time under 1 hour. The algorithm operates by:

  • Excluding HIT when clinical probability is low/intermediate and CLIA <0.13 U/ml

  • Predicting HIT when clinical probability is intermediate/high and CLIA >3.0 U/ml

  • Using PaGIA for cases falling between these thresholds

What are the benefits of sequential testing with multiple immunoassays compared to single-method approaches?

Research demonstrates that sequential testing with two different rapid immunoassays provides superior diagnostic accuracy for HIT compared to single-method approaches. The combination of LIA followed by CLIA has shown promising results in retrospective analyses. This sequential approach:

  • Leverages the complementary strengths of different methodologies

  • Reduces the gray area of diagnostic uncertainty to approximately 3% of cases

  • Avoids unnecessary functional assays, which are more resource-intensive and time-consuming

  • Balances the need for rapid results with diagnostic accuracy

What factors affect the appropriateness of PF4/heparin antibody testing in clinical practice?

Research on testing appropriateness reveals several key considerations:

  • Clinical setting: Studies show a high rate of testing (63.55%) occurs in intensive care units (ICUs) where thrombocytopenia has multiple potential causes, leading to many negative results .

  • Pre-test probability assessment: Evidence strongly suggests limiting testing to patients with intermediate or high 4Ts scores, as testing patients with low scores provides minimal diagnostic value while incurring unnecessary expense and potential patient distress .

  • Laboratory resources: Different institutions have varying access to specific immunoassay technologies, influencing testing strategies.

  • Clinician education: Research demonstrates that insufficient education regarding appropriate test ordering leads to overutilization of PF4/heparin antibody testing .

How should researchers address potential confounding factors when studying PF4/heparin antibodies?

When designing studies involving PF4/heparin antibodies, researchers should address several potential confounding factors:

  • Alternative causes of thrombocytopenia: In research cohorts, especially critically ill patients, multiple factors can cause thrombocytopenia (sepsis, medications, malignancy, etc.), potentially confounding HIT diagnosis. Studies should thoroughly document and account for these factors .

  • Timing of testing: The relationship between heparin exposure and antibody development/detection is time-dependent, requiring careful consideration in study design.

  • Prior heparin exposure: Previous heparin treatment may influence antibody development and should be documented in research protocols.

  • Concurrent conditions: Research shows that conditions like sepsis (present in 37.38% of one study population) and other inflammatory states can impact platelet counts independently of HIT .

What is the relationship between PF4/heparin antibodies and COVID-19 or vaccination contexts?

Recent research has examined the relationship between PF4/heparin antibodies in the contexts of COVID-19 infection and vaccination:

  • COVID-19 infection: Studies have found no significant increase in anti-PF4/heparin antibody levels during COVID-19 infection regardless of disease severity, despite a 2-fold increase in HIT suspicion during the pandemic .

  • Post-vaccination: Research shows no significant increase in anti-PF4/heparin antibody levels following COVID-19 vaccination, even in patients with systemic inflammatory disease (SID) .

  • VITT vs. HIT: In vaccine-induced immune thrombotic thrombocytopenia (VITT), anti-PF4/heparin antibody levels correlate strongly with platelet activation (measured by platelet microvesicle assay and moderately with soluble P-selectin levels), unlike in HIT. This suggests different pathophysiological mechanisms between these conditions .

These findings indicate that routine testing for PF4/heparin antibodies in COVID-19 patients or post-vaccination is not warranted outside clear contexts of HIT/VITT suspicion .

What are the optimal functional assays for confirming the pathogenicity of PF4/heparin antibodies?

When researching the pathogenic potential of PF4/heparin antibodies, several functional assays can be considered:

  • Serotonin Release Assay (SRA): Considered the gold standard for functional confirmation of HIT, this assay measures the release of radioactive serotonin from labeled platelets when exposed to the patient's serum in the presence of heparin .

  • Heparin-Induced Platelet Activation (HIPA) assay: Another functional test measuring platelet activation in the presence of patient serum and heparin .

  • Platelet microvesicle generation assay: Flow cytometry-based assay measuring platelet activation via microvesicle formation, shown to be particularly relevant in VITT cases .

  • Soluble P-selectin measurement: Evaluates platelet activation in plasma and may provide complementary information to other functional assays .

Researchers should select functional assays based on specific research questions, considering that different assays may yield varying results in different clinical contexts (e.g., HIT versus VITT) .

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