AOC3 Antibody

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Description

AOC3 Antibody Overview

AOC3 antibodies are immunodetection reagents designed to identify and quantify the AOC3 protein in research and diagnostic settings. These antibodies recognize epitopes within AOC3’s extracellular domain, which spans 763 amino acids (84.6 kDa) and contains a topaquinone (TPQ) cofactor critical for enzymatic activity .

Key Features:

  • Target: AOC3 (UniProt ID: Q16853) .

  • Family: Copper/topaquinone oxidase (CAO) .

  • Functions:

    • Mediates leukocyte adhesion and transmigration during inflammation .

    • Catalyzes oxidative deamination of primary amines (e.g., methylamine, dopamine) .

    • Regulates vascular smooth muscle cell (VSMC) differentiation and extracellular matrix organization .

AOC3 Antibody Applications

AOC3 antibodies are widely used in multiple experimental workflows:

ApplicationDetailsCitations
Western Blot (WB)Detects AOC3 at 85–90 kDa (monomer), 165–185 kDa (dimer), or 240–260 kDa (trimer) .
Immunohistochemistry (IHC)Localizes AOC3 in endothelial cells, adipocytes, and smooth muscle tissues .
Flow Cytometry (FACS)Identifies AOC3-positive myofibroblasts and leukocytes .
Functional StudiesInhibits leukocyte recruitment or enzymatic activity in inflammatory models .

AOC3 in Disease Pathogenesis

  • Atherosclerosis: AOC3 knockout in ApoE−/− mice increased atherosclerotic plaque size (15–25 weeks) and VSMC dedifferentiation .

  • Liver Disease: Anti-AOC3 antibodies reduced inflammatory cell recruitment in murine hepatic injury models .

  • Cancer: Soluble AOC3 (sVAP-1) is elevated in colorectal cancer and correlates with tumor progression .

Enzymatic Inhibition

A Phase IIa trial testing BI 1467335, an AOC3 inhibitor, demonstrated dose-dependent enzyme inhibition:

Dose (mg)AOC3 Activity (% of Baseline)Inhibition (%)
126.573.5
310.489.6
65.095.0
103.396.7

Data source: Randomized Phase IIa trial (n=97) .

Mechanistic Insights

  • Substrate Specificity: AOC3 exhibits broad substrate tolerance, including dopamine (k<sub>cat</sub>/K<sub>m</sub> = 7 s<sup>−1</sup>·mM<sup>−1</sup>) and cysteamine, linking it to insulin signaling and fatty acid metabolism .

  • Cellular Localization:

    • Membrane-bound in endothelial cells and adipocytes .

    • Stored in intracellular granules and translocated to the cell surface during inflammation .

Therapeutic Potential

AOC3 antibodies are being explored for:

  • Inflammatory Diseases: Blocking leukocyte extravasation in rheumatoid arthritis and liver fibrosis .

  • Metabolic Disorders: Modulating insulin resistance and adipose tissue function .

  • Cancer Diagnostics: Detecting sVAP-1 as a biomarker for colorectal and lung cancers .

Limitations and Challenges

  • Species Cross-Reactivity: Some antibodies (e.g., MAB3957) show partial cross-reactivity with mouse AOC3 .

  • Isoform Complexity: Three AOC3 isoforms exist, complicating antibody specificity .

Future Directions

Ongoing research aims to:

  • Develop isoform-specific AOC3 antibodies.

  • Validate AOC3 as a therapeutic target in clinical trials for diabetes and Alzheimer’s disease .

Product Specs

Buffer
Preservative: 0.03% ProClin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
14-16 weeks (made-to-order)
Synonyms
AOC3 antibody; At3g25780 antibody; K13N2.12 antibody; K13N2_10Allene oxide cyclase 3 antibody; chloroplastic antibody; EC 5.3.99.6 antibody
Target Names
Uniprot No.

Target Background

Function
This antibody targets allene oxide cyclase 3 (AOC3), an enzyme involved in the biosynthesis of 12-oxo-phytodienoic acid (OPDA), a crucial precursor to jasmonic acid.
Gene References Into Functions

Further information on the biosynthesis of jasmonates, including the role of AOC enzymes, can be found in the following publication:

  1. A. thaliana allene oxide cyclase 2 (AOC2) structure and its role in jasmonate biosynthesis: PMID: 17085685
Database Links

KEGG: ath:AT3G25780

STRING: 3702.AT3G25780.1

UniGene: At.27910

Protein Families
Allene oxide cyclase family
Subcellular Location
Plastid, chloroplast.
Tissue Specificity
Highly expressed in fully developed leaves.

Q&A

What is AOC3 and what cellular functions does it regulate?

AOC3/VAP-1 is a copper-containing amine oxidase that functions both as an adhesion molecule and an enzyme. It is predominantly expressed on endothelial cells under inflammatory conditions and regulates leukocyte extravasation into inflamed tissues. AOC3 also plays significant roles in:

  • Mediating leukocyte migration during inflammation

  • Contributing to extracellular matrix organization when expressed in vascular smooth muscle cells (VSMCs)

  • Accelerating terminal differentiation of VSMCs

  • Participating in cardiovascular calcification processes

In ApoE-deficient mice, AOC3 is co-localized with VSMCs in both the media and atherosclerotic plaques, suggesting a role beyond simple inflammatory cell recruitment .

How does AOC3 expression vary across different tissues?

AOC3 demonstrates tissue-specific expression patterns that researchers should consider when designing experiments:

Tissue TypeExpression LevelNotes
High Endothelial VenulesVery HighCritical for lymphocyte trafficking
Hepatic EndotheliaHighImportant in liver inflammation
AppendixHighMucosal immunity role
LungHighRelevant in respiratory diseases
Small IntestineHighMucosal barrier function
Adipose TissueModerateMetabolic implications
Skeletal MuscleVariablePredominant expression of isoform 2
HeartVariablePredominant expression of isoform 2
PancreasVariablePredominant expression of isoform 2
KidneyVariablePredominant expression of isoform 2

This distribution should guide tissue selection for positive and negative controls in immunohistochemistry and other applications .

What are the most commonly used detection methods for AOC3?

Based on the available antibodies and research practices, the following methods have proven effective for AOC3 detection:

  • Western Blotting (WB): Effective for detecting the approximately 84-85kDa protein in denatured samples

  • Immunohistochemistry (IHC): Both paraffin-embedded and frozen sections are suitable, with proper optimization

  • Flow Cytometry: Particularly useful for endothelial cell analysis, as demonstrated with HUVEC cells

  • ELISA: Effective for quantitative analysis, particularly using direct ELISA approaches

For optimal results, researchers should consider cell permeabilization (e.g., with saponin after paraformaldehyde fixation) when targeting intracellular epitopes .

How should I design experiments to study AOC3's role in atherosclerosis progression?

When investigating AOC3's role in atherosclerosis, consider the following experimental approach based on recent knockout studies:

  • Animal Model Selection: ApoE-/- mice are the gold standard model, but ApoE-/-AOC3-/- double knockout models provide valuable insights into AOC3's specific contributions

  • Timeline Considerations: Significant differences in plaque development between AOC3 knockouts and controls are observable from 15 to 25 weeks of age

  • Key Parameters to Measure:

    • Plaque surface area (increases from 15 to 25 weeks in AOC3-deficient mice)

    • VSMC differentiation markers (α-SMA staining)

    • T-lymphocyte infiltration (CD3+ cells)

    • Monocyte/macrophage presence (MOMA-2 staining)

    • Collagen content (Sirius red staining)

  • Tissue-Specific Analysis:

    • Examine media, plaque, and adventitia separately as AOC3 effects differ by compartment

    • At 25 weeks, CD3+ cell infiltration into media increases significantly in AOC3-deficient mice

  • Controls:

    • Age-matched ApoE-/- mice as primary controls

    • Consider both normal diet and high-fat/high-cholesterol diet conditions

What are the critical validation steps for new AOC3 antibodies?

When validating a new AOC3 antibody for research applications, implement this comprehensive validation protocol:

  • Cross-Reactivity Testing:

    • Verify specificity by comparing reactivity against recombinant human and mouse AOC3

    • Test against related amine oxidases (particularly AOC2) to confirm specificity

  • Knockout Validation:

    • Use tissues or cells from AOC3-/- animals as negative controls

    • Compare staining patterns between wild-type and knockout samples

  • Isoform Specificity:

    • Determine if your antibody recognizes specific isoforms (particularly important in skeletal muscle, heart, pancreas, and kidney where isoform 2 predominates)

  • Application-Specific Controls:

    • For IHC: Include isotype control antibodies on serial sections

    • For flow cytometry: Use matched isotype controls and secondary antibody-only controls

    • For Western blotting: Verify molecular weight (84-85kDa) and include positive tissue controls

  • Epitope Accessibility Analysis:

    • Test both permeabilized and non-permeabilized samples to determine if the epitope is extracellular or intracellular

How do I optimize immunohistochemical detection of AOC3 in vascular tissues?

For optimal AOC3 detection in vascular tissues, follow this specialized protocol:

  • Tissue Preparation:

    • Fresh frozen sections often preserve antigenicity better than paraffin embedding

    • If using paraffin sections, optimize antigen retrieval (heat-mediated citrate buffer pH 6.0 is often effective)

  • Section Selection:

    • For atherosclerosis studies, focus on the aortic sinus as a primary site

    • Collect serial sections to enable multiple staining comparisons

  • Staining Approach:

    • Use a panel of markers including:

      • AOC3 primary antibody (validated polyclonal or monoclonal)

      • α-SMA (smooth muscle cell marker)

      • CD3 (T-lymphocyte marker)

      • MOMA-2 (monocyte/macrophage marker)

  • Co-localization Analysis:

    • Implement dual immunofluorescence to determine AOC3 co-localization with VSMCs vs. endothelial cells

    • Analyze media, plaque, and adventitia regions separately

  • Quantification Strategy:

    • Use digital image analysis with defined thresholds

    • Measure both staining intensity and percentage of positive area

    • Quantify cell numbers for infiltrating immune cells

How do I interpret contradictory findings regarding AOC3 inhibition in atherosclerosis?

The literature shows conflicting results regarding AOC3 inhibition in atherosclerosis, with some studies showing reduction , others showing increase , and some showing plaque stabilization . To reconcile these contradictions:

  • Consider Experimental Context:

    • Genetic knockout vs. pharmacological inhibition approaches may yield different results

    • AOC3 inhibition through semicarbazide may have off-target effects on lysyl oxidases (~40% inhibition)

  • Developmental Timing:

    • Complete AOC3 deletion from birth vs. acute inhibition in adult animals

    • Age-dependency of effects (significant at 15 weeks vs. 25 weeks)

  • Mechanistic Analysis:

    • Examine VSMC phenotypic switching as a potential mechanism for varied outcomes

    • Analyze T-cell infiltration patterns, which may differ between plaque and media regions

  • Compensatory Mechanisms:

    • Consider upregulation of alternative adhesion molecules in knockout models

    • Evaluate MCP-1 expression changes, which increase in AOC3-deficient mice

  • Analytical Framework:

    • When contradictions persist, report both observations and potential explanations

    • Design experiments to specifically address the source of contradictions

What explains the age-dependent effects of AOC3 knockout on atherosclerosis?

Research with ApoE-/-AOC3-/- mice reveals age-dependent effects of AOC3 deficiency on atherosclerosis progression. To interpret this phenomenon:

  • Temporal Progression Analysis:

    • At 15 weeks: AOC3 deficiency increases CD3+ T-cell infiltration in plaques but not media

    • At 25 weeks: AOC3 deficiency leads to increased CD3+ infiltration in media, while plaque differences normalize

  • Compartment-Specific Effects:

    AgeTissue CompartmentCD3+ Cell Infiltration in AOC3-/-
    15 weeksPlaqueSignificantly increased
    15 weeksMediaNo significant difference
    15 weeksAdventitiaVariable, not significant on average
    25 weeksPlaqueNo significant difference
    25 weeksMediaSignificantly increased
    25 weeksAdventitiaVariable, not significant on average
  • VSMC Phenotype Changes:

    • α-SMA staining decreases in media of double knockout mice at 25 weeks

    • This suggests progressive VSMC dedifferentiation in the absence of AOC3

  • Interpretive Framework:

    • Early effects likely reflect altered initial immune cell recruitment

    • Later effects may reflect secondary adaptive responses and altered tissue remodeling

    • Consider AOC3's dual roles in inflammation and VSMC biology

How can I address cross-reactivity concerns with AOC3 antibodies?

Cross-reactivity is a significant concern with AOC3 antibodies due to homology with other amine oxidases. Address this methodically:

  • Known Cross-Reactivity Patterns:

    • Some antibodies show cross-reactivity between human and mouse AOC3

    • Others are species-specific (e.g., MAB39571 shows no cross-reactivity with mouse VAP-1)

  • Pre-Absorption Controls:

    • Pre-absorb antibody with recombinant AOC3 protein

    • Compare staining patterns with and without pre-absorption

  • Multiple Antibody Approach:

    • Use antibodies targeting different epitopes

    • Consistent results across different antibodies increase confidence

  • Species Considerations:

    • When working across species, validate each antibody for each species

    • Use species-specific positive controls

  • Detection Method Optimization:

    • For Western blots: Use longer blocking times and more stringent washing

    • For IHC: Titrate antibody concentration to minimize background

What is the current understanding of AOC3's role in adaptive immune responses in the airways?

Recent research has elucidated AOC3's role in airway adaptive immunity:

  • Temporal Contribution Pattern:

    • AOC3 contributes transiently to CD4+ T-cell traffic to lymphatic tissues

    • On day 3 after tracheal allergen exposure, recruitment to draining bronchial lymph nodes is reduced by 89% in AOC3-deficient models

    • By day 6, this difference is no longer observed

  • Compartment-Specific Effects:

    • AOC3 affects lymph node recruitment but not dispersion to lung or tracheal mucosa

    • Effector cell dispersal to peripheral tissues appears AOC3-independent

  • Age Dependency:

    • AOC3 contribution to leukocyte accumulation in lungs during asthma is age-dependent

    • Similar to atherosclerosis findings, suggesting a broader pattern of age-related functions

  • Functional Redundancy:

    • AOC3 appears largely redundant in allergic inflammatory responses

    • This suggests compensatory mechanisms through other adhesion molecules

  • Therapeutic Implications:

    • AOC3 inhibition may affect initial priming but not established allergic responses

    • Time-limited targeting might maximize benefits while minimizing off-target effects

What are emerging applications of AOC3 antibodies in biomedical research beyond traditional immunodetection?

Beyond conventional detection applications, AOC3 antibodies are finding novel research applications:

  • Therapeutic Development:

    • AOC3 antibodies are being explored as potential therapeutic agents

    • By binding AOC3, they may inhibit leukocyte extravasation in inflammatory diseases

  • Single-Domain Antibody Design:

    • Recent advances in computational antibody design (e.g., RFdiffusion networks) enable de novo design of antibodies against specific epitopes

    • This approach could generate highly specific AOC3 antibodies targeting functional domains

  • Atherosclerosis Biomarker Development:

    • AOC3 is an independent marker of atherosclerosis

    • Antibody-based detection methods are being developed for diagnostic applications

  • Structure-Function Studies:

    • Antibodies targeting specific domains help elucidate AOC3's dual role as adhesion molecule and enzyme

    • Domain-specific antibodies can distinguish between these functions

  • Vascular Phenotyping:

    • AOC3 antibodies enable characterization of vessel subtypes based on expression patterns

    • This facilitates more precise analysis of vascular biology in both normal and pathological states

How do knockout studies inform our understanding of AOC3's role in vascular pathologies?

Knockout studies have provided critical insights into AOC3's vascular functions:

  • Plaque Development Impacts:

    • Complete deletion of AOC3 in ApoE-/- mice increases plaque surface from 15 to 25 weeks of age

    • This contradicts some inhibitor studies, highlighting the importance of genetic models

  • VSMC Differentiation Effects:

    • AOC3 knockout leads to VSMC dedifferentiation, indicated by decreased α-SMA staining

    • This suggests AOC3 maintains VSMC differentiated phenotype

  • Inflammatory Cell Recruitment:

    • Double knockout mice (ApoE-/-AOC3-/-) show increased CD3+ T-cell infiltration in plaques at 15 weeks and in media at 25 weeks

    • This indicates compartment-specific and time-dependent effects

  • Cytokine Expression Changes:

    • AOC3 deficiency leads to increased MCP-1 expression

    • This may represent a compensatory mechanism for leukocyte recruitment

  • Cautionary Implications:

    • The authors conclude that "VAP-1 implication in VSMC differentiation seems more important than expected and should be considered with caution with regard to potential therapeutic targeting"

    • This suggests careful consideration of AOC3's multiple roles when developing targeted therapies

What are the optimal sample preparation techniques for consistent AOC3 detection in flow cytometry?

For optimal AOC3 detection by flow cytometry, implement this protocol based on successful research applications:

  • Cell Preparation:

    • For endothelial cells (e.g., HUVECs): Gentle enzymatic detachment to preserve surface epitopes

    • For tissue samples: Single-cell suspensions with minimal mechanical disruption

  • Fixation & Permeabilization:

    • Fix with paraformaldehyde (typically 2-4%)

    • Permeabilize with saponin for intracellular epitope access

    • Note: Some epitopes may be fixation-sensitive; compare fixed vs. unfixed results

  • Antibody Selection & Titration:

    • For human samples: Anti-human VAP-1/AOC3 antibodies (e.g., MAB39571)

    • Titrate antibody to determine optimal concentration

    • Include appropriate isotype controls (e.g., MAB003)

  • Detection Strategy:

    • For indirect detection: Use appropriate secondary antibodies (e.g., Allophycocyanin-conjugated Anti-Mouse IgG F(ab')2)

    • Consider direct conjugates for multicolor panels

  • Gating Strategy:

    • Include viability dye to exclude dead cells

    • Use forward/side scatter to identify cell populations

    • Compare with isotype control to set positive gates

How can I optimize Western blot protocols for detecting AOC3 in tissue lysates?

For reliable AOC3 detection by Western blotting:

  • Sample Preparation:

    • Prepare tissue lysates in RIPA buffer with protease inhibitors

    • For membrane-bound AOC3, include membrane fraction enrichment steps

    • Expected molecular weight: 84-85 kDa

  • Protein Loading:

    • Load 20-50 μg total protein per lane

    • Include positive control tissue (e.g., lung, adipose tissue)

  • Gel Selection & Transfer:

    • Use 8-10% SDS-PAGE gels due to AOC3's size

    • Transfer to PVDF membranes (preferred over nitrocellulose)

    • Verify transfer efficiency with reversible protein stain

  • Antibody Selection & Optimization:

    • Polyclonal antibodies (e.g., DF6745) work well for Western blot applications

    • Typical dilution range: 1:500-1:2000 (optimize for specific antibody)

    • Incubate overnight at 4°C for best results

  • Detection System:

    • HRP-conjugated secondary antibodies with enhanced chemiluminescence

    • For weak signals, consider signal enhancement systems or fluorescent secondaries

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