Applications : WB
Sample type: cells
Review: The relative abundance of proteins (APCS, PTGR1, FOLH1, EPRS, EEF2K, S100A16) between the control and ZEN groups analyzed by Western blot.
APCS (Serum amyloid P component) is a 25-27 kDa glycoprotein belonging to the pentraxin family with a characteristic pentameric organization. It is predominantly synthesized by hepatocytes and circulates as a constitutive serum protein .
APCS serves multiple biological functions:
Acts as a calcium-dependent ligand binding protein that interacts with DNA and histones
Scavenges nuclear material released from damaged circulating cells
Binds to apoptotic cells at early stages, potentially mediating their clearance
May function as a chaperone by binding to proteins in pathological amyloid cross-beta fold structures
While the calculated molecular weight of APCS is 25 kDa (based on its 223 amino acid sequence), the observed molecular weight in Western blotting typically ranges from 27-29 kDa . This difference is attributed to post-translational modifications, particularly glycosylation, which increase the apparent molecular weight of the protein on SDS-PAGE gels .
For maximum stability and retention of activity, APCS antibodies should be:
According to validation data from multiple sources:
For optimal immunohistochemical staining:
Primary recommendation: TE buffer pH 9.0
Alternative method: Citrate buffer pH 6.0
For formalin-fixed tissues: Heating tissue sections in 10mM Tris with 1mM EDTA, pH 9.0, for 45 min at 95°C followed by cooling at room temperature for 20 minutes
Cross-species reactivity varies significantly among APCS antibodies:
Human-specific antibodies: Many commercially available antibodies recognize only human APCS
Human/Mouse cross-reactive: Selected antibodies show reactivity to both human and mouse APCS, enabling translational research between model systems and human samples
Human/Mouse/Rat cross-reactive: Fewer antibodies offer triple-species reactivity, but these are valuable for comparative studies
Researchers should carefully validate cross-reactivity claims with appropriate positive and negative controls when studying APCS in animal models .
APCS is implicated in amyloid pathology through its binding to proteins in the pathological amyloid cross-beta fold. Research strategies include:
Co-localization studies: Using dual-labeling with APCS antibodies and amyloid-specific stains to demonstrate association in tissue sections
Binding kinetics analysis: Examining APCS-amyloid interactions using purified proteins and antibodies as detection reagents
Intervention studies: Using APCS antibodies to block APCS-amyloid interactions in experimental models
Clearance mechanisms: Investigating how APCS affects phagocytosis of amyloid fibrils by macrophages
Structural studies: Examining how APCS influences amyloid fibril formation and stability
For successful immunofluorescence with APCS antibodies:
Fixation method: Paraformaldehyde fixation (4%) is generally preferred over methanol/acetone
Dilution range: Typically 1:200-1:800 for optimal signal-to-noise ratio
Blocking: Use 5-10% normal serum from the same species as the secondary antibody
Controls: Include both positive controls (human liver) and negative controls (secondary antibody only)
Counterstaining: Nuclear counterstains like DAPI help localize APCS signals relative to cellular structures
Confocal analysis: Beneficial for precise localization, especially when examining APCS in relation to chromatin or nuclear material
When experiencing high background or non-specific signals:
Optimize antibody concentration: Titrate antibody to find the optimal working dilution
Improve blocking: Increase blocking time or try alternative blocking reagents (BSA vs. normal serum)
Wash thoroughly: Add additional washing steps with PBS-T (0.1% Tween-20)
Secondary antibody controls: Include controls without primary antibody to check for secondary antibody issues
Cross-adsorbed secondaries: Use highly cross-adsorbed secondary antibodies to reduce species cross-reactivity
Reduce incubation time: Shorter incubation with primary antibody may reduce non-specific binding
Pre-adsorption: In extreme cases, pre-adsorb antibody with liver powder to remove non-specific reactivity
Selection criteria should include:
Target epitope: N-terminal (AA 1-139) versus C-terminal (AA 140-223) targeting can affect detection of potential fragments
Validated applications: Confirm the antibody has been validated for your specific application
Reactivity: Ensure compatibility with your experimental species
Clone performance: Review published literature for successful use of specific clones
Conjugation requirements: For flow cytometry or multiplexing, consider pre-conjugated antibodies
Immunogen information: Understanding the immunogen helps predict potential cross-reactivity
Lot-specific validation: Request lot-specific validation data from suppliers
For quantitative analysis of APCS:
Western blot densitometry: Normalize APCS signals to loading controls (β-actin, GAPDH)
ELISA: Use sandwich ELISA with validated antibody pairs for quantification in solution
Flow cytometry: Mean fluorescence intensity (MFI) provides relative quantification
Image analysis in IHC/IF: Use software like ImageJ for quantifying staining intensity and distribution
qPCR correlation: Correlate protein levels with mRNA expression
Standard curves: Create standard curves using recombinant APCS protein
Multi-method validation: Confirm findings across different quantitative methods
APCS binds to apoptotic cells at early stages, suggesting it plays a role in their recognition and clearance. Research approaches include:
Co-staining studies: Using APCS antibodies alongside apoptosis markers (Annexin V, cleaved caspase-3)
Functional blocking: Using APCS antibodies to inhibit APCS binding to apoptotic cells
Time-course analysis: Examining the kinetics of APCS binding during apoptosis progression
Mechanism studies: Investigating molecular determinants exposed on apoptotic cells that are recognized by APCS
In vivo tracking: Using labeled APCS antibodies to track apoptotic cell clearance in animal models
APCS antibodies are finding increasing utility in:
Amyloidosis research: Examining APCS deposition in various forms of amyloidosis
Neurodegenerative diseases: Studying APCS in Alzheimer's and other neurodegenerative conditions
Inflammatory conditions: Investigating APCS as an acute phase reactant in inflammatory diseases
Autoimmune disorders: Exploring APCS roles in clearing nuclear material and preventing autoimmunity
Cancer biology: Understanding how APCS affects tumor cell apoptosis and immune recognition
Biomarker development: Evaluating APCS as a potential diagnostic or prognostic biomarker