APY5 Antibody

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Description

Potential Nomenclature Errors

The query may involve a typographical error or misinterpretation of antibody naming conventions. Examples of antibodies with structurally similar names include:

AK5 (Adenylate Kinase 5) Antibody

  • Function: Targets adenylate kinase 5, an intracellular enzyme involved in nucleotide metabolism.

  • Clinical Relevance: Linked to autoimmune limbic encephalitis, characterized by subacute memory loss and temporal lobe abnormalities .

  • Diagnostic Use: Detected via tissue-based assays (TBA) or cell-based assays (CBA) in serum/CSF .

ParameterAK5 Antibody Findings
Associated ConditionNon-paraneoplastic autoimmune encephalitis
Patient DemographicsPredominantly elderly males
Treatment ResponsePoor response to immunotherapy (e.g., corticosteroids, IVIg)
PrognosisHigh morbidity with frequent hippocampal atrophy

SpA5 (Staphylococcal Protein A) Antibody

  • Function: Targets pentameric staphylococcal protein A, critical for Staphylococcus aureus immune evasion .

  • Therapeutic Potential: Antibody Abs-9 binds SpA5 with nanomolar affinity (KD = 1.96 nM) and demonstrates prophylactic efficacy in murine sepsis models .

ParameterSpA5 Antibody (Abs-9) Findings
AffinityKD=1.959×109MK_D = 1.959 \times 10^{-9} \, \text{M} (Biolayer Interferometry)
Protective Efficacy80–85% survival in mice challenged with lethal MRSA/USA300 strains
Epitope SpecificityBinds α-helix residues N847–S857 of SpA5 (validated via ELISA and molecular docking)

Antibody Characterization Methods

While "APY5" remains unidentified, standard techniques for antibody validation include:

  • Flow Cytometry: Used for CD8α antibody (Clone 53-6.7) to identify murine T-cell subsets .

  • Immunohistochemistry: Critical for detecting AK5 antibodies in neuronal tissues .

  • Biolayer Interferometry: Quantifies binding kinetics (e.g., SpA5-Abs-9 interaction) .

Recommendations for Clarification

To resolve ambiguity in the query, consider:

  1. Verifying Target Nomenclature: Cross-referencing with established databases (UniProt, NCBI Gene).

  2. Exploring Related Antibodies:

    • Anti-CD8α (Clone 53-6.7): Mouse-reactive IgG2a antibody for T-cell depletion studies .

    • Anti-SSTR5: Targets somatostatin receptor type 5, implicated in neuroendocrine regulation .

Limitations of Current Data

No peer-reviewed studies, commercial products, or clinical trials reference "APY5 Antibody." Researchers encountering this term should seek additional context or confirm the target’s validity through orthogonal methods (e.g., mass spectrometry, genomic sequencing).

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M Phosphate Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
APY5 antibody; At1g14250 antibody; F14L17.1 antibody; F7A19Probable apyrase 5 antibody; AtAPY5 antibody; EC 3.6.1.5 antibody; ATP-diphosphatase antibody; ATP-diphosphohydrolase antibody; Adenosine diphosphatase antibody; ADPase antibody; NTPDase antibody; Nucleoside triphosphate diphosphohydrolase 5 antibody
Target Names
APY5
Uniprot No.

Target Background

Function
Catalyzes the hydrolysis of phosphoanhydride bonds in nucleoside tri- and di-phosphates.
Database Links

KEGG: ath:AT1G14250

STRING: 3702.AT1G14250.1

UniGene: At.41981

Protein Families
GDA1/CD39 NTPase family
Subcellular Location
Membrane; Single-pass type II membrane protein.
Tissue Specificity
Highly expressed in young rosette leaves but only weakly in roots.

Q&A

What is Adenylate Kinase-5 (AK5) Antibody?

Anti-adenylate kinase-5 (AK5) antibody is an autoantibody targeting the intracellular enzyme adenylate kinase-5, primarily expressed in the brain. First identified in 2007 by researchers from the University of Pennsylvania Hospital, Carolina Neurological Clinic, and Carmel Internal Medicine & Neurology, AK5 antibody is now recognized as a biomarker for a distinct subtype of autoimmune limbic encephalitis . Unlike many other autoimmune encephalitis types, AK5 antibody-associated disease is rarely associated with underlying malignancy, establishing it as primarily a non-paraneoplastic condition. The antibody targets an intracellular antigen, which has significant implications for its pathogenic mechanism and response to therapy. AK5 antibody encephalitis predominantly affects elderly males and typically presents with rapidly progressive amnesia and other cognitive impairments .

How does AK5 antibody-associated encephalitis differ from other autoimmune encephalitides?

AK5 antibody encephalitis demonstrates several distinguishing features compared to other autoimmune encephalitides:

FeatureAK5 Antibody EncephalitisSurface Antibody Encephalitis (e.g., anti-NMDAR, anti-LGI1)Other Intracellular Antibody Encephalitis (e.g., anti-Hu, anti-Ma2)
Target antigenIntracellular enzymeCell surface/synaptic proteinsIntracellular antigens
Association with tumorsRarely associated with malignancyVariable association (NMDAR: often; LGI1: rarely)Frequently associated with malignancy
Response to immunotherapyGenerally poorGenerally favorableGenerally poor
Pathogenic mechanismPrimarily T-cell mediatedPrimarily antibody-mediatedPrimarily T-cell mediated
Typical presentationRapidly progressive amnesiaVaried (seizures, psychiatric symptoms, movement disorders)Often multifocal, may include limbic features

AK5 antibody encephalitis shares similarities with other intracellular antibody-associated conditions in its poor response to immunotherapy, suggesting analogous T-cell-mediated pathophysiology . This contrasts with surface antibody encephalitides, which typically respond better to antibody-depleting therapies. The almost exclusive limbic presentation and elderly male predominance further distinguish AK5 antibody encephalitis from other autoimmune encephalitis subtypes .

What are the primary clinical manifestations of AK5 antibody encephalitis?

The primary clinical manifestation of AK5 antibody encephalitis is rapidly progressive amnesia with predominant impairment of working memory. As documented in case reports, patients typically present with a subacute onset of memory deficits that progress over weeks to months . The clinical case described in search result details a 66-year-old African American man who presented with a one-month history of progressive working memory deficits. This memory impairment affects both personal episodic memory and the ability to form new memories, severely impacting daily functioning. Cognitive assessment using standardized tools such as the Montreal Cognitive Assessment (MOCA) often reveals significant impairment, with scores typically below normal ranges. In the documented case, the patient initially scored 18/30 on MOCA evaluation .

Unlike some other autoimmune encephalitides, early epileptic manifestations are characteristically absent in AK5 antibody encephalitis . The disease primarily affects cognitive domains with relative sparing of other neurological functions. This clinically distinct presentation can help distinguish AK5 antibody encephalitis from other autoimmune and infectious etiologies of limbic encephalitis during initial evaluation.

What are the standard methods for detecting AK5 antibodies?

Detection of AK5 antibodies requires specialized immunological techniques not routinely available in standard clinical laboratories. The current gold standard for AK5 antibody detection involves:

  • Immunohistochemistry (IHC): Indirect immunofluorescence on brain tissue sections (particularly hippocampus) is used to identify characteristic staining patterns consistent with AK5 antibody. This method requires expertise in interpreting immunostaining patterns and access to appropriate tissue samples.

  • Immunofixation: This confirmatory technique helps identify specific antibody-antigen interactions and was utilized in the case described in search result to confirm the presence of anti-AK5 antibodies after initial research testing identified a suspicious staining pattern.

  • Research Reference Laboratory Testing: Due to the rarity of AK5 antibodies, detection typically requires sending samples to specialized research laboratories with expertise in neuronal autoantibody testing .

It's worth noting that while cell-based immunofluorescence cytochemistry (CB-IFC) assays have been developed for other neural antibodies like anti-aquaporin 5 (AQP5) , equivalent standardized commercial assays for AK5 antibodies are not widely available. This highlights a significant diagnostic challenge and potential area for methodological advancement in AK5 antibody research.

How does cerebrospinal fluid analysis contribute to AK5 antibody diagnosis?

Cerebrospinal fluid (CSF) analysis provides crucial diagnostic information in suspected AK5 antibody encephalitis, even before specific antibody testing results are available:

  • Mild Lymphocytic Pleocytosis: CSF typically shows mild lymphocytic pleocytosis, with white blood cell counts in the range of 5-20 cells/μL. In the documented case, initial CSF analysis revealed 19 WBCs, which decreased to 7 WBCs on follow-up testing .

  • Oligoclonal Bands: The presence of unmatched oligoclonal bands in CSF but not in serum suggests intrathecal immunoglobulin synthesis, supporting an autoimmune etiology. The case report documented 17 unmatched oligoclonal bands .

  • Elevated IgG Index: An increased IgG index, as seen in the reported case (1.74 g/L), further indicates intrathecal antibody production .

  • Antibody Detection in CSF: Testing for AK5 antibodies in CSF is essential, as some neural antibodies may be detected exclusively or at higher concentrations in CSF compared to serum. The AK5 antibody in the reported case was confirmed in CSF by research testing followed by immunofixation .

  • Exclusion of Alternative Etiologies: Comprehensive infectious evaluation and other paraneoplastic antibody testing help exclude alternative causes of limbic encephalitis.

CSF analysis typically reveals normal glucose and protein levels, with the absence of infectious agents. The combination of these CSF findings, particularly when accompanied by characteristic MRI changes, strongly suggests autoimmune encephalitis even before specific antibody results are available, allowing for prompt initiation of empiric immunotherapy.

What imaging findings are characteristic of AK5 antibody encephalitis?

Magnetic resonance imaging (MRI) reveals characteristic findings in AK5 antibody encephalitis that correlate with the clinical presentation of limbic dysfunction:

  • Bilateral Medial Temporal and Hippocampal Involvement: The hallmark imaging finding is symmetrical FLAIR hyperintense signals in the bilateral medial temporal lobes and hippocampi . This symmetry helps distinguish AK5 antibody encephalitis from unilateral presentations more common in herpes simplex virus encephalitis.

  • Persistence of Imaging Abnormalities: Despite immunotherapy, FLAIR hyperintensities often persist, as demonstrated in the case report where repeat MRI after initial treatment confirmed persistent abnormalities in the medial temporal lobes and hippocampi . This persistence may correlate with the generally poor treatment response observed in AK5 antibody encephalitis.

  • Absence of Enhancement or Restricted Diffusion: Unlike infectious or neoplastic processes, contrast enhancement and diffusion restriction are typically absent in AK5 antibody encephalitis, helping to narrow the differential diagnosis.

  • Correlation with Electroencephalography (EEG): Despite the evident structural abnormalities on MRI, EEG findings may be normal even with prolonged monitoring, as observed in the described case where 48-hour EEG monitoring did not reveal epileptiform activity . This dissociation between imaging abnormalities and EEG findings is notable and may be characteristic of AK5 antibody encephalitis.

Serial imaging can be valuable in monitoring disease progression and treatment response, although radiological improvement may lag behind clinical improvement or, in some cases, may not occur despite clinical stabilization.

What is the cellular mechanism of AK5 antibody-mediated neuronal damage?

The pathophysiological mechanism of AK5 antibody-mediated neuronal damage appears to primarily involve T-cell-mediated cytotoxicity rather than direct antibody-mediated effects. This mechanism aligns with other autoimmune encephalitides associated with antibodies against intracellular antigens:

  • Intracellular Antigen Targeting: AK5 is an intracellular enzyme, and antibodies against intracellular antigens are generally considered markers of T-cell-mediated autoimmunity rather than being directly pathogenic themselves, as they cannot access their target antigen in intact cells .

  • T-Cell Infiltration: Histopathological studies in patients with anti-AK5 encephalitis have demonstrated infiltration of various T-cell subtypes (CD3+, CD4+, CD8+) in affected brain regions . This infiltration pattern resembles that observed in other intracellular antibody-associated conditions like anti-Hu, anti-Ma2, and anti-KLHL11 syndromes .

  • Cytotoxic T-Cell Response: The predominant mechanism likely involves CD8+ cytotoxic T-cells recognizing AK5 peptides presented on MHC class I molecules on neuronal surfaces, leading to direct cytotoxicity against neurons expressing the target antigen. This results in irreversible neuronal damage, explaining the often poor response to antibody-depleting therapies .

  • Limited Role of Antibodies: Unlike antibodies against cell-surface antigens (e.g., NMDAR, LGI1) which can directly alter neuronal function, anti-AK5 antibodies likely serve primarily as biomarkers of the underlying T-cell-mediated process rather than being directly pathogenic themselves.

This pathophysiological understanding explains the therapeutic implications: treatments targeting antibody production (e.g., plasma exchange) have limited efficacy, while broader immunosuppressants targeting T-cell responses (e.g., cyclophosphamide) may offer better outcomes in some patients .

How does AK5 antibody encephalitis compare to other autoimmune encephalitides?

AK5 antibody encephalitis occupies a unique position in the spectrum of autoimmune encephalitides, sharing features with both paraneoplastic and non-paraneoplastic conditions:

FeatureAK5 Antibody EncephalitisCell-Surface Antibody EncephalitisClassical Paraneoplastic Encephalitis
Pathogenic mechanismPrimarily T-cell mediatedPrimarily antibody mediatedPrimarily T-cell mediated
Association with cancerRarely tumor-associatedVariable (NMDAR often, LGI1 rarely)Frequently tumor-associated
Response to immunotherapyGenerally poorGenerally favorableGenerally poor
Neurological presentationAlmost exclusively limbicDiverse (psychiatric, seizures, movement disorders)Often multifocal
Reversibility of deficitsLimitedOften substantialLimited
Typical demographicElderly malesVariable, often youngerVariable, often older

AK5 antibody encephalitis shares the T-cell-mediated pathophysiology and poor treatment response of classical paraneoplastic encephalitides (e.g., anti-Hu, anti-Ma2), yet lacks the strong association with underlying malignancy . This creates a somewhat paradoxical presentation that can delay diagnosis if clinicians expect to find an underlying tumor.

The focused limbic presentation with predominant memory impairment differentiates AK5 antibody encephalitis from many other autoimmune encephalitides that often present with more diverse neurological manifestations. This clinical specificity likely reflects the concentrated expression of AK5 in neuronal populations within limbic structures.

What role do T-cells play in AK5 antibody-mediated disease?

T-cells appear to play a central role in the pathogenesis of AK5 antibody-mediated encephalitis:

  • Histopathological Evidence: Examination of brain tissue from patients with AK5 antibody encephalitis has revealed infiltration of various T-cell subtypes (CD3+, CD4+, CD8+) in affected brain regions, particularly the limbic structures . This pattern of T-cell infiltration resembles that observed in other intracellular antibody-associated conditions.

  • Parallels with Other Intracellular Antigen Syndromes: The clinical and therapeutic similarities between AK5 antibody encephalitis and other T-cell-mediated paraneoplastic syndromes (anti-Hu, anti-Ma2, anti-KLHL11) strongly suggest analogous pathological mechanisms involving cytotoxic T-cell responses .

  • Treatment Response Patterns: The limited efficacy of antibody-depleting therapies (like plasma exchange and IVIG) compared to broader immunosuppressants (like cyclophosphamide) further supports a predominantly T-cell-mediated pathophysiology . Therapies that target T-cell proliferation or activation may therefore be more effective than those primarily targeting antibody production.

  • Memory Cell Formation: The tendency toward chronicity and relapse in AK5 antibody encephalitis suggests the formation of immunological memory, likely involving memory T-cells that can persist despite initial immunotherapy and drive recurrent or ongoing neuroinflammation.

Understanding the central role of T-cells in AK5 antibody encephalitis has important therapeutic implications, suggesting that early, aggressive immunotherapy targeting T-cell responses may be necessary to prevent irreversible neuronal damage and cognitive impairment.

What immunotherapy protocols have been effective for AK5 antibody encephalitis?

The management of AK5 antibody encephalitis remains challenging, with variable response to immunotherapy. Based on the limited documented cases, the following approach emerges:

  • First-Line Therapies: Initial treatment typically involves:

    • High-dose intravenous methylprednisolone (typically 1000 mg daily for 3-5 days)

    • Intravenous immunoglobulin (IVIG) at 2 g/kg divided over 2-5 days

  • Second-Line Therapies: In cases with inadequate response to first-line treatment, second-line options include:

    • Plasma exchange (PLEX), typically 5-7 exchanges over 10-14 days

    • Cyclophosphamide (documented success with monthly 1000 mg IV regimen)

    • Rituximab (anti-CD20 monoclonal antibody) may be considered, though specific efficacy data for AK5 antibody encephalitis is limited

  • Response Patterns: Based on the documented case in search result , the patient showed:

    • No significant improvement with initial steroid and IVIG treatment

    • Mild clinical improvement with subsequent methylprednisolone and plasma exchange

    • Significant improvement in working memory and activities of daily living after 6 cycles of monthly cyclophosphamide

This treatment response pattern suggests that more aggressive immunosuppression targeting both B and T-cell responses may be necessary in AK5 antibody encephalitis. The notable improvement with cyclophosphamide, which broadly affects both B and T-cell populations, supports the hypothesis of T-cell-mediated pathophysiology in this condition.

How should treatment response be monitored in AK5 antibody encephalitis?

Comprehensive monitoring of treatment response in AK5 antibody encephalitis should incorporate multiple assessments:

  • Cognitive Assessment:

    • Standardized cognitive testing such as the Montreal Cognitive Assessment (MOCA) provides objective measurement of cognitive function. In the documented case, MOCA scores improved from 18/30 to 21/30 after cyclophosphamide treatment .

    • Domain-specific testing focusing on working memory and episodic memory functions most affected in AK5 antibody encephalitis.

  • Functional Assessment:

    • Evaluation of activities of daily living (ADLs) and instrumental activities of daily living (IADLs) provides practical measures of treatment impact.

    • Caregiver reports of functional improvements, as noted in the documented case where family reported "significant improvements in working memory and activities of daily living" .

  • Neuroimaging:

    • Serial MRI to assess persistence, progression, or resolution of FLAIR hyperintensities in medial temporal lobes and hippocampi.

    • Advanced imaging techniques such as volumetric analysis may detect subtle structural changes not apparent on conventional sequences.

  • CSF Analysis:

    • Follow-up lumbar puncture to assess improvement in inflammatory markers (cell count, oligoclonal bands, IgG index).

    • When available, quantitative assessment of AK5 antibody titers in CSF.

  • Electroencephalography:

    • Serial EEG monitoring, particularly if seizures develop during the disease course.

  • Biomarker Development:

    • Research protocols may include longitudinal assessment of serum and CSF biomarkers of neuronal damage and inflammation.

Integration of these monitoring approaches provides a comprehensive assessment of treatment response and guides decisions regarding treatment duration, escalation, or de-escalation.

What are the current gaps in AK5 antibody research?

Several significant knowledge gaps exist in AK5 antibody research that represent important areas for future investigation:

  • Standardized Detection Methods:

    • Unlike more common neural antibodies, standardized commercial assays for AK5 antibody detection are lacking.

    • Development and validation of cell-based assays or ELISA techniques, similar to those developed for anti-aquaporin 5 antibodies , would improve diagnostic accessibility.

    • Exploration of potential correlation between antibody titers and disease severity or treatment response.

  • Epidemiological Understanding:

    • The true incidence and prevalence of AK5 antibody encephalitis remain unknown.

    • Demographic patterns beyond the observed elderly male predominance require clarification through larger case series.

    • Genetic or environmental risk factors have not been identified.

  • Pathophysiological Mechanisms:

    • The precise cellular and molecular mechanisms of neuronal damage remain incompletely understood.

    • The relationship between antibody production and T-cell responses needs further elucidation.

    • Animal models of AK5 antibody encephalitis have not been established to enable mechanistic studies.

  • Treatment Optimization:

    • Evidence-based treatment protocols are lacking due to the rarity of the condition.

    • The optimal sequence, combination, and duration of immunotherapies remain undefined.

    • Identification of predictive biomarkers of treatment response would enable more personalized therapeutic approaches.

  • Long-term Outcomes:

    • Systematic long-term follow-up studies are needed to characterize the natural history and treatment-modified course.

    • The risk and predictors of relapse require clarification to guide maintenance immunotherapy decisions.

    • The potential for development of chronic progressive cognitive decline despite immunotherapy needs investigation.

Addressing these knowledge gaps will require collaborative international efforts to pool cases of this rare condition and establish research registries with standardized clinical, immunological, and outcome assessments.

How might understanding AK5 antibody mechanisms inform research on other neurological autoantibodies?

The study of AK5 antibody encephalitis provides valuable insights that may inform broader autoimmune neurology research:

  • Bridge Between Paraneoplastic and Non-paraneoplastic Autoimmunity:

    • AK5 antibody encephalitis represents an interesting intersection, sharing the T-cell-mediated pathophysiology of paraneoplastic conditions but typically occurring without associated malignancy .

    • This challenges the traditional division between paraneoplastic and non-paraneoplastic autoimmunity and suggests a continuum of autoimmune mechanisms.

  • Targeted Neuroanatomical Vulnerability:

    • The highly specific limbic involvement in AK5 antibody encephalitis may provide insights into regional neuronal susceptibility factors in autoimmune processes.

    • Understanding why certain neuronal populations are preferentially targeted could inform protective strategies for vulnerable neurons.

  • Methodological Advancements:

    • Techniques developed for AK5 antibody detection may be applicable to other rare neural antibodies.

    • The cell-based immunofluorescence cytochemistry (CB-IFC) approaches used for anti-aquaporin 5 antibody detection could serve as models for developing improved AK5 antibody assays.

  • Treatment Response Patterns:

    • The differential response to various immunotherapies in AK5 antibody encephalitis may provide insights into optimizing treatment approaches for other T-cell-mediated autoimmune conditions.

    • The reported significant improvement with cyclophosphamide suggests a potential treatment pathway for similar conditions with poor response to first-line therapies.

  • Epitope Mapping Strategies:

    • Techniques used to characterize epitopes in other autoantibodies, such as anti-aquaporin 5 , could be applied to AK5 antibody research to identify immunodominant regions and potential therapeutic targets.

Cross-pollination of research methods and conceptual frameworks between AK5 antibody research and other areas of autoimmune neurology may accelerate progress in multiple fields simultaneously.

What novel therapeutic approaches are being investigated for AK5 antibody encephalitis?

While research specifically targeting AK5 antibody encephalitis is limited due to its rarity, several emerging therapeutic approaches in autoimmune neurology have potential relevance:

  • Targeted B-Cell Therapies:

    • Beyond rituximab (anti-CD20), newer B-cell-depleting monoclonal antibodies like ocrelizumab and ofatumumab offer potential advantages in pharmacokinetics and tolerability.

    • Targeting B-cell survival factors with agents like belimumab (anti-BAFF) may provide more sustained suppression of antibody production.

  • T-Cell Directed Therapies:

    • Given the T-cell-mediated pathophysiology of AK5 antibody encephalitis , agents targeting T-cell activation or trafficking may hold promise:

      • Fingolimod and other S1P receptor modulators that sequester lymphocytes in lymphoid tissues

      • Selective costimulation blockers like abatacept that interfere with T-cell activation

      • JAK inhibitors that block cytokine signaling pathways important in T-cell differentiation and function

  • Combination Immunotherapy Approaches:

    • Simultaneous targeting of multiple immune pathways may be more effective than sequential single-agent approaches.

    • The documented efficacy of cyclophosphamide , which affects both B and T-cell populations, supports this multifaceted approach.

  • Precision Immunotherapy:

    • Antigen-specific tolerization strategies aimed at inducing immune tolerance specifically to AK5 without broad immunosuppression represent a theoretical but promising frontier.

    • Such approaches would require detailed epitope mapping of immunodominant AK5 regions.

  • Neuroprotective Strategies:

    • Adjunctive therapies aimed at protecting vulnerable neurons from immune-mediated damage could complement immunotherapy.

    • Potential approaches include anti-excitotoxic agents, mitochondrial protectants, and neurotrophic factor augmentation.

  • Cognitive Rehabilitation:

    • Novel cognitive training paradigms specifically targeting the memory systems affected in AK5 antibody encephalitis.

    • Emerging technologies including virtual reality-based cognitive rehabilitation and non-invasive brain stimulation techniques.

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