ATHB-20 Antibody

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Description

Overview of ATHB-20 Protein

ATHB-20 (Homeobox-leucine zipper protein ATHB-20) is a class I HD-ZIP transcription factor involved in regulating gene expression in response to stress factors. It binds to DNA promoter elements like the GCC-box, which are critical for stress signal transduction pathways .

PropertyDescription
Gene IDAT5G65310 (Arabidopsis thaliana)
Protein Length286 amino acids
FunctionTranscriptional regulation under stress; DNA binding via homeodomain motifs
Cellular RoleModulates growth, development, and stress responses in plants
Protein FamilyHD-ZIP family, Class I subfamily

Potential Interaction Partners

STRING database analysis (2024) identifies ATHB-20’s predicted functional partners, which include transcription factors and stress-response regulators :

ProteinFunction
F4KCH0_ARATHRING/FYVE/PHD zinc finger protein; stress signaling
BIM3Brassinosteroid-signaling protein; growth regulation
ERF039/ERF021Ethylene-responsive transcription factors; pathogen response
GT-3ATrihelix transcription factor; light/dark stress adaptation

Research Context for ATHB Antibodies

While no studies directly describe an "ATHB-20 Antibody," research on homologous plant proteins (e.g., ATHB-5) provides insight into potential applications:

  • ATHB-5 Antibody: A polyclonal antibody (PHY7569A) targeting ATHB-5, a related HD-ZIP protein, is used in Western blotting to study ABA (abscisic acid)-mediated growth inhibition in seedlings .

  • Immunogen Design: Antibodies for HD-ZIP proteins are typically raised against synthetic peptides from conserved C-terminal regions .

Gaps in Current Knowledge

  • No commercial or peer-reviewed sources in the provided search results specifically mention an antibody targeting ATHB-20.

  • Research on ATHB-20 focuses on its genetic and molecular roles in Arabidopsis, not antibody development .

Future Directions

  • Antibody Development: Custom antibodies could be designed using immunogenic peptides from ATHB-20’s unique domains (e.g., N-terminal homeodomain).

  • Functional Studies: Such antibodies would enable protein localization, expression analysis, and interaction studies under stress conditions.

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
ATHB-20 antibody; At3g01220 antibody; T4P13.9Homeobox-leucine zipper protein ATHB-20 antibody; HD-ZIP protein ATHB-20 antibody; Homeodomain transcription factor ATHB-20 antibody
Target Names
ATHB-20
Uniprot No.

Target Background

Function
ATHB20 is a probable transcription factor.
Gene References Into Functions
  1. ATHB20 is expressed during seed germination in the micropylar endosperm and in the root cap. Mutation of ATHB20 increases abscisic acid (ABA) sensitivity and seed dormancy. [ATHB20] PMID: 19947978
Database Links

KEGG: ath:AT3G01220

STRING: 3702.AT3G01220.1

UniGene: At.41313

Protein Families
HD-ZIP homeobox family, Class I subfamily
Subcellular Location
Nucleus.
Tissue Specificity
Widely expressed.

Q&A

What is CD20 and why is it an effective target for antibody therapy?

CD20 represents one of the most successful targets for antibody therapy in oncology and autoimmunity due to several key characteristics. CD20 is a non-glycosylated phosphoprotein expressed on the surface of B cells from the pre-B cell stage through memory B cells, but not on plasma cells or hematopoietic stem cells. This restricted expression pattern allows for selective targeting of B cells while sparing stem cells necessary for B-cell recovery .

The molecule's effectiveness as a therapeutic target stems from several properties:

  • High expression levels on most B-cell malignancies

  • Minimal shedding or internalization (though this varies by antibody type)

  • Close proximity of the epitope to the plasma membrane, which enhances complement activation

  • No circulating form of CD20 that would compete with cell-bound targets

The success of CD20 as a target has been validated by the significant improvements in survival rates for B-cell lymphoma patients in the decade following the introduction of anti-CD20 therapy .

How do type I and type II anti-CD20 antibodies differ in structure and function?

Anti-CD20 antibodies are classified as either type I (rituximab-like) or type II (tositumomab-like) based on their binding characteristics and functional effects:

PropertyType I (Rituximab-like)Type II (Tositumomab-like)
Epitope bindingCD20 extracellular loopCD20 extracellular loop (different orientation)
CD20 redistributionInduces redistribution into lipid raftsMinimal redistribution into lipid rafts
Complement activationStrong CDC activityWeak CDC activity
Direct cell deathLow to moderateHigher homotypic adhesion-mediated death
CD20 internalizationHigher rateLower rate
In vivo efficacyVariableOften superior in preclinical models

Type I antibodies like rituximab primarily induce CD20 redistribution into lipid rafts, enhancing complement-dependent cytotoxicity (CDC). In contrast, type II antibodies demonstrate superior efficacy in B-cell depletion despite weaker CDC activity, largely due to reduced CD20 internalization and enhanced direct cell death induction . Research has shown that type II antibodies are approximately five times more potent than type I in depleting human CD20-expressing B cells in transgenic mouse models .

What are the primary mechanisms of action for anti-CD20 monoclonal antibodies?

Anti-CD20 monoclonal antibodies operate through four main effector mechanisms, though their relative contribution varies by antibody type:

  • Antibody-Dependent Cellular Cytotoxicity (ADCC): Engagement of Fcγ receptors on NK cells and macrophages, leading to target cell lysis. Evidence strongly supports this as a critical mechanism, as demonstrated by studies showing reduced efficacy in Fcγ receptor-deficient models .

  • Complement-Dependent Cytotoxicity (CDC): Activation of the classical complement pathway through C1q binding, leading to formation of the membrane attack complex. Type I antibodies are particularly effective at inducing CDC due to their ability to redistribute CD20 into lipid rafts .

  • Direct Programmed Cell Death (PCD): Induction of non-classical apoptosis independent of caspase activation and Fc receptor engagement. Type II antibodies typically demonstrate superior direct PCD induction .

  • Antibody-Dependent Cellular Phagocytosis (ADCP): Fcγ receptor-mediated phagocytosis by macrophages. Research using transgenic mouse models has demonstrated that macrophages play a critical role in B-cell depletion by anti-CD20 antibodies .

The relative importance of these mechanisms remains somewhat controversial, though current evidence suggests that Fc-FcγR interactions are essential for in vivo efficacy, while the contribution of CDC varies by context and antibody type .

What epitope-directed approaches can improve monoclonal antibody development against CD20?

Epitope-directed monoclonal antibody production represents a sophisticated approach to developing highly specific anti-CD20 antibodies. This methodology focuses on generating antibodies against computationally predicted epitopes rather than using whole protein immunization. For CD20 antibody development, researchers can employ the following strategy:

  • In silico epitope prediction: Utilize algorithms to identify immunogenic peptide sequences on CD20, particularly focusing on the extracellular loop which contains the binding sites for most therapeutic anti-CD20 antibodies .

  • Antigenic peptide design: Create short peptides (13-24 residues) that correspond to the identified epitopes. These can be synthesized as three-copy inserts on surface-exposed loops of carrier proteins like thioredoxin to enhance immunogenicity .

  • Hybridoma screening optimization: Implement miniaturized ELISA assays using novel platforms such as DEXT microplates to facilitate rapid hybridoma screening with simultaneous epitope identification .

  • Spatial distribution considerations: Generate antibodies against spatially distant epitopes on CD20 to facilitate validation schemes applicable to two-site ELISA, western blotting, and immunocytochemistry .

This approach offers several advantages over traditional methods, including higher antibody specificity, direct epitope mapping for better characterization, and the potential to generate multiple antibodies against different CD20 regions in a single hybridoma production cycle .

How can researchers evaluate anti-CD20 antibody resistance mechanisms in B-cell malignancies?

To investigate anti-CD20 antibody resistance, researchers should implement a multi-faceted approach combining in vitro, ex vivo, and in vivo methodologies:

  • CD20 modulation/internalization assays: Quantify the rate and extent of CD20 internalization following antibody binding using flow cytometry or confocal microscopy. This is critical as type I antibodies like rituximab can trigger substantial CD20 internalization, reducing target availability and antibody half-life .

  • Complement defense molecule analysis: Measure expression levels of complement regulatory proteins (CD55, CD59) on patient samples before and after therapy, as these can protect malignant B cells from complement-mediated lysis .

  • FcγR polymorphism genotyping: Analyze patient FcγR polymorphisms, particularly FCGR3A (CD16) variants, as these significantly impact ADCC potency and clinical outcomes .

  • Ex vivo sensitivity testing: Expose patient-derived malignant B cells to anti-CD20 antibodies in the presence of autologous effector cells and complement to assess intrinsic resistance .

  • Transcriptomic profiling: Identify gene expression patterns associated with resistance by comparing responders and non-responders, focusing on pathways related to apoptosis regulation, complement inhibition, and CD20 expression .

Research has revealed significant differences in CD20 internalization rates among B-cell malignancies, with chronic lymphocytic leukemia and mantle cell lymphoma demonstrating rapid CD20 internalization similar to normal B cells, while follicular lymphoma and diffuse large B-cell lymphoma cells typically show greater resistance to CD20 modulation .

How do autoantibodies against immune molecules influence research on CD20-targeting therapies?

Recent research on autoantibodies provides valuable insights for CD20-targeting therapeutic development. Studies examining autoantibodies following COVID-19 infection have revealed important immunoregulatory mechanisms that may apply to anti-CD20 therapy research:

  • Autoantibody profiling relevance: Studies have shown that severe inflammatory conditions can trigger various autoantibodies, including those targeting immune regulatory molecules. When developing or administering CD20 therapies, researchers should consider monitoring autoantibody development, particularly in conditions with high inflammatory burden .

  • Ig isotype considerations: Different Ig isotypes (IgG, IgA, IgM) show distinct patterns of autoantibody formation. For example, research on COVID-19 patients demonstrated that IgA autoantibodies against immune molecules were significantly higher in severe cases . This suggests the importance of evaluating multiple isotypes when studying immunomodulatory effects of anti-CD20 therapies.

  • Epitope mapping applications: High-resolution epitope mapping techniques used to identify immunodominant epitopes in autoantibody research can be adapted to precisely characterize anti-CD20 antibody binding sites. This approach revealed that autoantibodies in COVID-19 targeted specific functional domains of ACE2 , and similar methodology could identify optimal CD20 epitopes for therapeutic targeting.

  • Biomarker development: The correlation between autoantibody levels and disease severity suggests that monitoring specific autoantibody patterns could serve as biomarkers in conditions treated with anti-CD20 therapies, potentially predicting treatment response or immune-related adverse events .

What factors should researchers consider when designing combination therapies with anti-CD20 antibodies?

When designing combination therapies with anti-CD20 antibodies, researchers should consider several critical factors to maximize efficacy while minimizing toxicity:

  • Mechanism of action complementarity: Select agents with complementary mechanisms to anti-CD20 antibodies. For example, combining type I antibodies (strong complement activators) with agents that downregulate complement inhibitors could synergistically enhance CDC .

  • Sequential vs. concurrent administration: Consider the timing of combination therapies. Some studies suggest that administering certain chemotherapeutics prior to rituximab may enhance CD20 expression and improve outcomes .

  • CD20 modulation effects: Account for the impact of companion therapies on CD20 expression and distribution. Some agents may upregulate CD20 expression, while others might affect its redistribution into lipid rafts, influencing antibody efficacy .

  • Antibody isotype selection: For novel combinations, consider whether type I or type II anti-CD20 antibodies are more appropriate. In malignancies prone to CD20 internalization (like CLL), type II antibodies may be preferable as they induce less antigen modulation .

  • Immune effector availability: Evaluate how combination therapies affect effector cell populations (NK cells, macrophages) and complement levels, as these are critical for anti-CD20 antibody function. Therapies depleting these effectors may compromise anti-CD20 efficacy .

Research has demonstrated that replacing consumed complement components can restore rituximab activity in ex vivo CDC assays, suggesting that strategies maintaining complement levels might benefit patients receiving anti-CD20 therapy .

How are next-generation anti-CD20 antibodies being engineered to overcome limitations of first-generation therapeutics?

The evolution of anti-CD20 antibodies spans three generations, each addressing specific limitations of previous iterations:

  • Second-generation modifications: These antibodies maintain the IgG1 framework but are either humanized or fully human to reduce immunogenicity. Examples include ofatumumab, which binds to a distinct epitope on CD20 that includes both the small and large extracellular loops, providing enhanced complement activation even in cells with low CD20 expression .

  • Third-generation engineering: These antibodies feature Fc region modifications to enhance effector functions. Specific approaches include:

    • Glycoengineering to reduce core fucosylation, increasing FcγRIIIa binding affinity and ADCC activity

    • Amino acid substitutions at positions 239, 332, and 330 to enhance C1q binding and CDC

    • Fc mutation to selectively engage specific FcγR subtypes

  • Bispecific antibody development: Creating bispecific antibodies that simultaneously target CD20 and other molecules like CD3 (to recruit T cells) or CD47 (to enhance phagocytosis) .

  • Alternative isotype exploration: Investigating IgA or IgE anti-CD20 antibodies to engage different effector cell populations through alternative Fc receptors .

Research indicates that third-generation antibodies with enhanced Fc-mediated effector functions have demonstrated improved B-cell depletion in preclinical models and early clinical trials, particularly in difficult-to-treat populations like rituximab-refractory patients .

What are the molecular determinants of CD20 modulation and how do they impact antibody efficacy?

The molecular determinants of CD20 modulation represent a critical area of research that directly impacts antibody efficacy:

  • CD20 redistribution mechanisms: Type I antibodies induce CD20 redistribution into lipid rafts through bivalent binding and subsequent crosslinking of CD20 molecules. This reorganization enhances C1q capture but also promotes internalization. The specific molecular interactions driving this redistribution involve changes in the actin cytoskeleton and ezrin/radixin/moesin protein activation .

  • Internalization pathways: Research has identified distinct internalization mechanisms for CD20:

    • Clathrin-dependent endocytosis

    • Caveolae-mediated internalization

    • Actin-dependent processes
      Type I antibodies primarily trigger internalization through interaction with FcγRIIb on the B-cell surface, leading to reduced macrophage recruitment and degradation of CD20/antibody complexes .

  • Disease-specific variations: Significant differences in CD20 modulation exist across B-cell malignancies:

    • Chronic lymphocytic leukemia (CLL) and mantle cell lymphoma cells demonstrate rapid CD20 internalization similar to normal B cells

    • Follicular lymphoma and diffuse large B-cell lymphoma cells show greater resistance to CD20 modulation
      These differences likely contribute to the variable clinical efficacy of rituximab across these diseases .

  • Cytoskeletal regulation: The actin cytoskeleton plays a crucial role in regulating CD20 mobility and internalization. Inhibitors of actin polymerization can reduce CD20 internalization, potentially enhancing antibody efficacy .

Understanding these mechanisms has significant implications for antibody design and clinical application, supporting the rationale for developing type II anti-CD20 antibodies that induce minimal antigen modulation for diseases prone to CD20 internalization .

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