ACA5 Antibody

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Description

AK5 (Adenylate Kinase 5) Antibody

AK5 antibodies are autoantibodies linked to autoimmune limbic encephalitis, a rare neurological disorder characterized by inflammation of the limbic system.

Structure and Function

  • AK5 Role: Adenylate kinase 5 is an intracellular enzyme involved in nucleotide metabolism, converting ATP and AMP into two ADP molecules .

  • Antibody Mechanism: AK5 antibodies target neuronal cytoplasmic proteins, disrupting cellular energy homeostasis and leading to immune-mediated neuronal damage .

Clinical Significance

  • Associated Condition: Non-paraneoplastic autoimmune limbic encephalitis .

  • Key Symptoms:

    • Severe memory impairment

    • Seizures

    • Psychiatric disturbances

  • Pathology: Brain biopsies in AK5 encephalitis cases show vasculitis with transmural T-cell infiltrates and neuronal loss .

Research Findings

  • Diagnostic Utility:

    • CSF testing for AK5-IgG shows higher sensitivity than serum .

    • Co-localization studies confirm AK5 specificity using affinity-purified antibodies .

  • Treatment Response:

    • Aggressive immunosuppression (e.g., cyclophosphamide) improves outcomes .

Data Table: AK5 Antibody Prevalence and Outcomes

Study (Source)Cohort SizeCSF SeropositivityClinical Outcome
Mayo Clinic (10)6 patients100% (CSF)Partial recovery with immunotherapy
Case Report (4)1 patientPositive CSF/biopsyFavorable outcome post-cyclophosphamide

AC5 (Adenylate Cyclase 5) Antibody

AC5 antibodies are research tools targeting adenylate cyclase type 5, a membrane-bound enzyme critical for cAMP signaling.

Functional Role

  • Enzyme Activity: Catalyzes cAMP production in response to G-protein-coupled receptor activation .

  • Physiological Impact:

    • Regulates insulin secretion via cytosolic Ca²⁺ modulation .

    • Mediates cardiac β-adrenergic signaling .

Research Applications

  • Antibody Clones:

    • ab196748: Rabbit polyclonal, validated for IHC and ICC/IF in human samples .

    • ab66037: Rabbit polyclonal, suitable for WB and ICC/IF .

  • Key Studies:

    • AC5 knockout models show impaired glucose tolerance and insulin secretion .

Comparative Analysis

FeatureAK5 AntibodyAC5 Antibody
TargetIntracellular enzyme (adenylate kinase 5)Membrane enzyme (adenylate cyclase 5)
Disease AssociationAutoimmune limbic encephalitisResearch tool (no direct disease link)
Detection MethodCSF immunofluorescence, cell-based assaysWestern blot, immunohistochemistry
Therapeutic RelevanceImmunosuppression improves outcomesUsed in metabolic/cardiovascular research

Detection Methodologies

  • AK5 Antibodies:

    • Tissue Immunofluorescence: Staining patterns on mouse brain composites .

    • Cell-Based Assays (CBA): Confirm specificity using transfected HEK293 cells .

  • AC5 Antibodies:

    • Western Blot: Detects ~130 kDa band in human tissues .

    • Immunohistochemistry: Localizes AC5 in pancreatic islets and cardiac tissue .

Product Specs

Buffer
Preservative: 0.03% ProClin 300; Constituents: 50% Glycerol, 0.01M Phosphate Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
14-16 week lead time (made-to-order)
Synonyms
ACA5 antibody; At1g08065 antibody; T6D22.30Alpha carbonic anhydrase 5 antibody; AtaCA5 antibody; AtalphaCA5 antibody; EC 4.2.1.1 antibody; Alpha carbonate dehydratase 5 antibody
Target Names
ACA5
Uniprot No.

Target Background

Function
Reversible hydration of carbon dioxide.
Database Links

KEGG: ath:AT1G08065

STRING: 3702.AT1G08065.1

UniGene: At.51524

Protein Families
Alpha-class carbonic anhydrase family
Subcellular Location
Plastid, chloroplast stroma.

Q&A

What are Anti-Centromere Antibodies and how are they detected in laboratory settings?

Anti-centromere antibodies (ACA) are autoantibodies that target proteins located at the centromere region of chromosomes. They are primarily detected using immunofluorescence staining on HEp-2 cells, where they produce a distinctive centromere pattern. The standard detection protocol involves:

  • Screening serum samples at a 1:40 dilution

  • Titrating positive tests to a maximum dilution of 1:1280

  • Reporting the pattern of staining at the end dilution

The presence of ACA is defined specifically by a centromere pattern of immunofluorescent staining, which appears as discrete speckled nuclear staining that corresponds to centromere locations .

What is the clinical significance of ACA in autoimmune disease research?

ACA are present in approximately 1-13% of patients with primary Sjögren's syndrome (SS) in recently defined cohorts. Their presence is associated with a distinct clinical phenotype including:

  • More severe exocrine glandular dysfunction

  • Higher frequency of Raynaud's phenomenon

  • Higher risk of developing limited scleroderma

  • Lower frequency of anti-SSA/SSB antibodies, hyperglobulinemia, rheumatoid factor, and leucopenia

  • Higher frequency of primary biliary cirrhosis

  • Potentially increased risk of lymphoma development

These associations make ACA valuable biomarkers for disease stratification and prognostication in research contexts .

How should researchers design experiments to investigate ACA's role in exocrine gland dysfunction?

When investigating the relationship between ACA and exocrine gland dysfunction, researchers should implement a multi-faceted experimental approach:

  • Comparative cohort analysis: Design studies comparing ACA-positive versus ACA-negative subjects with appropriate sample size calculations based on expected differences. The SICCA registry found ACA-positive subjects had significantly reduced salivary flow (median 0.08 vs 0.37 ml/5 min) and lower Schirmer's test values (median 4 vs 5 mm/5 min) .

  • Histopathological assessment: Include systematic analysis of minor salivary gland biopsies with standardized focus scoring. Evidence shows ACA-positive subjects have a higher frequency of focus score ≥2 (71% vs 53%) and higher median focus score (2.8 vs 2.5) .

  • Functional studies: Incorporate objective measures of glandular function using standardized protocols for:

    • Unstimulated whole saliva collection

    • Schirmer's tear testing

    • Ocular surface staining

  • Control for confounders: Account for variables such as age, gender, disease duration, and concurrent medications that might influence glandular function independently.

What methodologies can address the technical challenges in ACA detection standardization?

Standardizing ACA detection across research settings requires addressing several technical challenges:

  • Reference standards establishment: Create calibrated positive controls with defined ACA titers that can be distributed to multiple research centers.

  • Assay standardization: Implement detailed protocols specifying:

    • Cell substrate source and quality control

    • Serum dilution series (starting at 1:40 as used in SICCA registry)

    • Fluorescence microscopy settings

    • Image acquisition parameters

  • Reading standardization:

    • Develop training sets with annotated images showing positive and negative patterns

    • Implement double-reading procedures for ambiguous results

    • Conduct regular proficiency testing among readers

  • Alternative methodologies validation: Compare newer methods against immunofluorescence on HEp-2 cells, calculating sensitivity, specificity, and concordance metrics .

How should researchers interpret the relationship between ACA positivity and glandular dysfunction severity?

The interpretation of ACA's relationship with glandular dysfunction requires careful statistical analysis:

  • Quantitative assessment: ACA-positive subjects demonstrate substantially impaired exocrine function with dramatically increased risk of severe dysfunction:

    • 12.24-fold increased risk (95% CI, 4.91–41.02) of unstimulated whole saliva <0.1 ml/min

    • 2.52-fold increased risk (95% CI, 1.50–4.36) of Schirmer value <5 mm/5 min

  • Histopathological correlation: Higher focus scores in ACA-positive subjects suggest more intense lymphocytic infiltration, providing a potential mechanistic link between antibody presence and functional impairment .

  • Multivariate analysis: When analyzing ACA's impact, researchers should employ multivariate regression models controlling for:

    • Age

    • Gender

    • Disease duration

    • Presence of other autoantibodies

    • Concurrent medications

  • Longitudinal assessment: Consider the temporal relationship between ACA development and progression of glandular dysfunction to distinguish between causation and correlation.

What approaches help resolve discrepancies between ACA immunofluorescence results and clinical presentations?

Discrepancies between laboratory findings and clinical manifestations require systematic troubleshooting approaches:

  • Technical verification:

    • Repeat testing with different dilutions

    • Confirm findings using alternative methodologies

    • Check for interfering factors in samples

  • Clinical reassessment:

    • Perform comprehensive evaluation of subtle clinical features that might be overlooked

    • Consider that subclinical glandular dysfunction may be present despite absence of symptoms

    • Evaluate for features of limited scleroderma which may coexist with Sjögren's syndrome

  • Longitudinal monitoring:

    • Track antibody titers and clinical manifestations over time

    • ACA positivity may precede clinical manifestations

  • Genetic modifiers:

    • Consider genetic factors that might modify phenotypic expression

    • HLA typing may reveal patterns explaining discordant presentations

What experimental designs can differentiate between ACA as a pathogenic factor versus a disease marker?

Differentiating between pathogenic roles and biomarker status requires sophisticated experimental designs:

  • Temporal association studies:

    • Longitudinal cohort studies tracking ACA development relative to symptom onset

    • Serial sampling before and after disease onset in high-risk populations

  • In vitro functional studies:

    • Isolate IgG fractions from ACA-positive and negative patients

    • Expose primary salivary gland epithelial cells to these fractions

    • Measure effects on:

      • Cell proliferation

      • Apoptosis rates

      • Secretory function

      • Gene expression profiles

  • Animal models:

    • Passive transfer of purified ACA to animal models

    • Monitor for development of glandular dysfunction

    • Histopathological assessment for recapitulation of human disease features

  • Mechanistic investigations:

    • Identify molecular targets of ACA in glandular tissue

    • Investigate signaling pathways disrupted by ACA binding

    • Develop targeted interventions blocking ACA-target interaction

How can researchers optimize Design of Experiments (DOE) approaches for studying ACA-associated phenotypes?

Optimization of experimental design using DOE principles improves research efficiency:

  • Parameter identification and optimization:

    • Identify critical variables affecting ACA detection sensitivity

    • Design factorial experiments to systematically test combinations of parameters

    • Determine optimal conditions that maximize signal-to-noise ratio

  • Response surface methodology:

    • Map the relationship between experimental variables and outcomes

    • Identify the "sweet spot" or Design Space where experimental conditions yield optimal results

    • Develop robust setpoint calculations to ensure reproducibility

  • Quality attribute definition:

    • Define hard specifications that must be fulfilled

    • Establish acceptable ranges for experimental outcomes

    • Create models that predict results based on input parameters

  • Statistical power optimization:

    • Conduct power analyses to determine minimum sample sizes

    • Consider study design efficiency (full factorial vs. fractional factorial)

    • Implement center points to assess experimental variability, similar to the approach described for ADC development

What methodological approaches are recommended for investigating ACA subtypes and their distinct clinical associations?

Investigation of ACA subtypes requires sophisticated immunological techniques:

  • Antigen-specific immunoassays:

    • Develop ELISA or multiplex assays targeting specific centromere proteins

    • Compare reactivity patterns between different clinical phenotypes

    • Correlate subtype profiles with severity of glandular dysfunction

  • Epitope mapping:

    • Identify specific epitopes recognized by ACA from different patient subgroups

    • Generate overlapping peptide arrays of centromere proteins

    • Map differences in epitope recognition between patients with varying disease manifestations

  • Single-cell analysis:

    • Isolate ACA-producing B cells using fluorescently labeled centromere proteins

    • Perform single-cell RNA sequencing to characterize cellular origins

    • Analyze B cell receptor repertoires to understand clonal relationships

  • Cross-reactivity assessment:

    • Test ACA for binding to non-centromere targets

    • Investigate potential molecular mimicry between centromere proteins and exocrine gland antigens

How can researchers integrate multi-omics approaches with ACA profiling for comprehensive disease characterization?

Integration of multi-omics approaches enhances understanding of ACA-associated disease mechanisms:

  • Integrated biomarker panels:

    • Combine ACA profiling with other autoantibody measurements

    • Incorporate proteomic analysis of saliva and tears

    • Add genomic and transcriptomic profiling of blood and glandular tissue

    • Develop composite biomarker scores that improve predictive value

  • Systems biology approaches:

    • Apply network analysis to identify molecular pathways associated with ACA positivity

    • Use machine learning algorithms to discover patterns in multi-dimensional datasets

    • Develop predictive models incorporating clinical, serological, and molecular data

  • Longitudinal multi-omics:

    • Collect samples at multiple timepoints for dynamic profiling

    • Track changes in molecular signatures relative to antibody titers and clinical progression

    • Identify early molecular changes preceding clinical manifestations

  • Therapeutic target identification:

    • Utilize multi-omics data to identify potential intervention points

    • Develop in vitro systems to test targeted therapies

    • Design rational combination approaches based on systems-level understanding

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