ATL57 Antibody

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Description

Antibody Targeting in ATL Therapeutics

ATL, a malignancy linked to human T-cell leukemia virus type 1 (HTLV-1), has driven research into antibodies targeting T-cell surface markers or viral antigens. Key therapeutic strategies include:

  • Anti-CD25 (IL-2Rα) antibodies: Used to block IL-2 signaling and deplete malignant T-cells. LMB-2 (PE38-conjugated anti-CD25) showed partial responses in ATL patients during Phase II trials .

  • Anti-CD52 (Campath-1H): Induces antibody-dependent cellular cytotoxicity (ADCC) against ATL cells .

  • Anti-CD2 (MEDI-507): A humanized antibody demonstrating efficacy in preclinical ATL models .

Potential Context for "ATL57 Antibody"

The "57" in "ATL57" may refer to a study identifier or a clone designation. For example:

  • Study 57 in ATL Research: A Phase II trial referenced in Clinical targeting recombinant immunotoxins for cancer therapy investigated anti-CD25 immunotoxins (e.g., LMB-2) for ATL .

  • Monoclonal Antibody Cross-Reactivity: Anti-ATLA (ATL-associated antigen) sera labeled HTLV-1 viral particles and plasma membranes in MT-2 cells, suggesting potential epitope targets .

Table: Antibodies in ATL Clinical Trials

Target AntigenAntibody/ConjugateMechanismPhaseReference
CD25 (IL-2Rα)LMB-2 (PE38)Immunotoxin deliveryII
CD25Anti-TacBlocks IL-2 signalingII
CD52Campath-1HADCC-mediated cell lysisII
CD2MEDI-507T-cell depletionPrecl.

Research Gaps and Considerations

  • Specificity of "ATL57": No direct literature matches "ATL57" as a standalone antibody. It may denote an experimental compound from an unindexed study or a typographical reference (e.g., MT-57, an anti-IgA antibody) .

  • Functional Parallels: Antibodies like LMB-2 and anti-Tac highlight the importance of targeting IL-2Rα in ATL, a pathway potentially relevant to "ATL57" .

Future Directions

Emerging antibody engineering platforms (e.g., bispecifics, CAR-T cells) and high-throughput screening tools could clarify the role of novel antibodies like "ATL57" in overcoming drug resistance or improving tumor selectivity.

Product Specs

Buffer
**Preservative:** 0.03% Proclin 300
**Constituents:** 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
ATL57; At2g27940; T1E2.14; RING-H2 finger protein ATL57; RING-type E3 ubiquitin transferase ATL57
Target Names
ATL57
Uniprot No.

Target Background

Database Links

KEGG: ath:AT2G27940

STRING: 3702.AT2G27940.1

UniGene: At.38697

Protein Families
RING-type zinc finger family, ATL subfamily
Subcellular Location
Membrane; Single-pass membrane protein.

Q&A

What is AL-57 antibody and what is its molecular target?

AL-57 is a human monoclonal antibody that specifically recognizes the high-affinity (HA) conformation of the αL I domain of LFA-1 (Lymphocyte Function-associated Antigen 1) . Unlike most integrin antagonists that bind to both low-affinity and high-affinity conformations, AL-57 exhibits exceptional specificity for the open, active conformation of the LFA-1 I domain . This conformational specificity makes AL-57 a valuable tool for investigating the activation status of LFA-1 on immune cells. The antibody was identified through phage display library selection using a locked-open HA I domain as the target, resulting in an antibody that can distinguish between the active and inactive states of this critical immune adhesion molecule .

How was AL-57 antibody discovered and developed?

AL-57 was identified through a sophisticated phage display selection strategy. Researchers used a human Fab-phage library called FAB-300 with a diversity of 1 × 10^10, constructed by cloning V-genes from autoimmune patients . The selection process followed these key steps:

  • The library was first depleted with isolated, inactive wild-type I domain to remove non-specific binders

  • The depleted library underwent selection against the high-affinity (HA) I domain

  • After three rounds of selection, isolates were screened using purified HA and wild-type I domains in phage ELISA

  • Promising candidates were tested in whole cell ELISA using HA and LA (low-affinity) cells

  • The AL-57 isolate demonstrated specific binding to HA cells in a Mg²⁺-dependent manner

Following identification, the Fab fragment was reformatted into complete human IgG (IgG1 or IgG4) molecules for further characterization and application in research settings .

What distinguishes AL-57 from other anti-LFA-1 antibodies?

AL-57 exhibits several unique characteristics that differentiate it from conventional anti-LFA-1 antibodies like MHM24:

  • Conformational specificity: AL-57 selectively binds to the high-affinity (activated) form of LFA-1, whereas antibodies like MHM24 bind to both high-affinity and low-affinity conformations .

  • Activation reporting capability: AL-57 serves as a reporter for the high-affinity conformation of LFA-1, allowing researchers to specifically detect affinity upregulation of LFA-1 upon cell activation .

  • Binding efficiency: In competitive binding assays on cells expressing the locked-open HA I domain, AL-57 demonstrated superior blocking efficiency against ICAM-1 with an IC₅₀ value of 0.4 ± 0.2 nM, compared to 1.9 ± 1.2 nM for MHM24 .

  • Fully human origin: Being a fully human antibody, AL-57 has potential advantages for therapeutic applications compared to murine antibodies like MHM24 .

This conformational specificity makes AL-57 particularly valuable for studying the dynamics of LFA-1 activation during immune responses and for therapeutically targeting only the activated form of LFA-1.

How can AL-57 be used to assess LFA-1 activation states in experimental systems?

AL-57 provides a powerful tool for assessing LFA-1 activation states through several methodological approaches:

  • Flow cytometric analysis: AL-57 can be used to quantify the proportion of activated LFA-1 molecules on cell surfaces. Research has shown that activation stimuli like PMA or stromal cell-derived factor-1 can increase AL-57 binding epitopes approximately tenfold on memory T lymphocytes . This approach allows researchers to measure the kinetics and magnitude of LFA-1 activation in response to various stimuli.

  • Comparative activation analysis: By comparing binding patterns of AL-57 with other activation-sensitive antibodies like KIM127 (which binds to the leg of the β2 subunit), researchers can distinguish between different types of conformational changes in LFA-1 .

  • Chemical induction analysis: AL-57 can detect LFA-1 activation induced by various agents, including PMA, Mg²⁺/EGTA, and DTT. This makes it valuable for studying multiple activation pathways . For example, DTT treatment significantly enhances AL-57 binding to PBMCs in activating buffer, providing insight into redox-regulated conformational changes in LFA-1 .

  • Quantitative epitope exposure: Studies have shown that activation-dependent epitopes for AL-57 are expressed on approximately 10% of LFA-1 molecules on agonist-stimulated cells, providing quantitative measures of the activation state .

These approaches allow researchers to precisely characterize the activation threshold, kinetics, and heterogeneity of LFA-1 activation across different cell populations and experimental conditions.

What experimental conditions are critical for optimal AL-57 binding?

Several experimental conditions significantly impact AL-57 binding efficiency and should be carefully controlled:

  • Divalent cation dependency: AL-57 binding to LFA-1 is strictly Mg²⁺-dependent. The antibody does not bind to high-affinity cells in the absence of Mg²⁺, making buffer composition critical .

  • Calcium inhibition: High concentrations of Ca²⁺ inhibit the high-affinity I domain conformation, thereby reducing AL-57 binding. Researchers found no binding to PBMCs in inactivating buffer containing 2 mM CaCl₂ .

  • Activating buffer composition: For optimal detection of activated LFA-1, an activating buffer containing 10 mM MgCl₂ and 2 mM EGTA should be used. This combination chelates calcium while providing magnesium, promoting the high-affinity conformation .

  • Temperature considerations: Cell staining protocols with AL-57 IgG1 should be performed at room temperature with gentle rocking for 30 minutes for optimal results .

  • Cell fixation effects: AL-57 binding specificity is dependent on native protein conformation, so unfixed cells should be used in binding studies to preserve the natural conformational state of LFA-1 .

Careful attention to these conditions ensures reliable and reproducible results when using AL-57 for detection of activated LFA-1.

How can AL-57 be used to investigate LFA-1/ICAM-1 interactions?

AL-57 serves as an excellent tool for studying LFA-1/ICAM-1 interactions through several methodological approaches:

  • Competitive binding assays: AL-57 completely blocks multimeric ICAM-1 binding to high-affinity LFA-1, allowing researchers to assess the functional importance of the high-affinity I domain in ligand binding . This can be quantified using flow cytometry with PE-labeled detection systems.

  • Adhesion inhibition studies: AL-57 effectively blocks adhesion of cells expressing high-affinity LFA-1 to ligand-expressing cells like keratinocytes, with an IC₅₀ value of 1.1 ± 0.8 nM . This allows for detailed analysis of the role of activated LFA-1 in cell-cell adhesion.

  • Functional impact assessment: AL-57 inhibits PHA-induced lymphocyte proliferation, providing a method to study how LFA-1/ICAM-1 interactions contribute to T cell activation and proliferation beyond simple adhesion .

  • Epitope mapping: By comparing the binding characteristics and inhibitory effects of AL-57 with other anti-LFA-1 antibodies, researchers can map critical binding sites involved in ICAM-1 recognition .

These approaches allow researchers to dissect the molecular basis of LFA-1/ICAM-1 interactions and their functional significance in immune cell biology.

What controls should be included when using AL-57 in research?

When designing experiments with AL-57, several controls are essential to ensure valid interpretation of results:

  • Isotype control antibodies: Include appropriate human IgG1 or IgG4 control antibodies (depending on the AL-57 isotype used) to account for non-specific binding .

  • Conformational controls: Include cells expressing the low-affinity form of LFA-1 as negative controls for AL-57 binding specificity .

  • Divalent cation controls:

    • Include samples in Mg²⁺-free buffer to demonstrate the cation dependency of AL-57 binding

    • Include samples in high Ca²⁺ buffer to show inhibition of the high-affinity state

  • Alternative anti-LFA-1 antibodies: Include non-conformation-specific antibodies like MHM24 to distinguish between changes in LFA-1 expression level versus conformational changes .

  • Functional blocking controls: When using AL-57 in blocking experiments, include appropriate positive controls (like MHM24) and negative controls (non-binding antibodies) to contextualize inhibitory potency .

Including these controls enables researchers to confidently interpret AL-57 binding data in the context of LFA-1 activation state rather than other variables.

What are the recommended protocols for using AL-57 in flow cytometry?

For optimal results when using AL-57 in flow cytometric applications, researchers should follow these methodological guidelines:

  • Cell preparation:

    • Harvest cells and resuspend in appropriate staining buffer (PBS, 2 mM MgCl₂, 1% BSA, 0.05% sodium azide)

    • Use freshly prepared cells whenever possible to preserve native conformational states

    • Seed 2 × 10⁵ cells per well in 96-well plates for consistent results

  • Antibody concentration:

    • Titrate AL-57 to determine optimal concentration for your specific cell type

    • Typical concentrations range from 0.1-10 μg/ml based on published protocols

  • Staining procedure:

    • Incubate cells with AL-57 for 30 minutes at room temperature with gentle rocking

    • Wash twice with staining buffer containing 2 mM MgCl₂

    • Incubate with PE-conjugated secondary antibody (anti-human IgG) for 20 minutes at 4°C

    • Wash and analyze promptly

  • Activation conditions:

    • For detecting activation-dependent changes, prepare parallel samples:
      a) Inactivating buffer: 2 mM CaCl₂ and 2 mM MgCl₂
      b) Activating buffer: 10 mM MgCl₂ and 2 mM EGTA
      c) PMA activation: 100 ng/ml PMA in activating buffer
      d) DTT activation: 10 mM DTT in activating buffer

Following these protocols ensures consistent and reproducible detection of the high-affinity LFA-1 conformation across different experimental conditions.

How can AL-57 be used to study different activation pathways of LFA-1?

AL-57 is particularly valuable for investigating various activation pathways of LFA-1 due to its conformational specificity. Here are methodological approaches for studying different activation mechanisms:

  • Inside-out signaling analysis:

    • Stimulate cells with physiological activators (chemokines, TCR/CD3 stimulation)

    • Measure AL-57 binding to quantify the resulting conformational change in LFA-1

    • Compare timing and magnitude of AL-57 epitope exposure with functional outcomes

  • Direct integrin activation:

    • Use Mg²⁺/EGTA treatment to directly induce the high-affinity conformation

    • Quantify AL-57 binding to measure the proportion of LFA-1 molecules converted to high-affinity state

    • Compare with physiological activation to distinguish between partial and complete activation

  • Reducing agent-induced activation:

    • Treat cells with DTT to induce redox-regulated conformational changes

    • Use AL-57 binding to detect these changes and compare with other activation pathways

    • Investigate the role of disulfide bonds in LFA-1 conformational regulation

  • Pharmacological manipulation:

    • Test effects of various signaling inhibitors on AL-57 epitope exposure

    • Correlate changes in AL-57 binding with alterations in downstream signaling events

    • Map the signaling pathways regulating LFA-1 activation

This methodological versatility makes AL-57 an exceptional tool for dissecting the complex regulation of LFA-1 activation in various immunological contexts.

How should AL-57 binding data be quantified and analyzed?

  • Flow cytometry analysis:

    • Report mean fluorescence intensity (MFI) values normalized to appropriate controls

    • Calculate the percentage of AL-57-positive cells using properly defined gates

    • Present data as fold-change in binding relative to baseline conditions

  • Concentration-response relationships:

    • Generate dose-response curves for AL-57 binding under various activation conditions

    • Calculate EC₅₀ values to quantify activation potency of different stimuli

    • Compare these values across experimental conditions or cell types

  • Inhibition analysis:

    • For blocking experiments, calculate IC₅₀ values as shown in Table 1, which summarizes comparative inhibition data for AL-57 and MHM24:

AntibodyIC₅₀ on HA Cells (nM)IC₅₀ on PBMCs (nM)IC₅₀ for Keratinocyte Adhesion (nM)
AL-570.4 ± 0.20.6 ± 0.41.1 ± 0.8
MHM241.9 ± 1.20.3 ± 0.21.1 ± 1.1

Table 1: Comparative inhibitory potency of AL-57 and MHM24 antibodies in different experimental systems

  • Multiparameter analysis:

    • Correlate AL-57 binding with other activation markers or functional outcomes

    • Use multicolor flow cytometry to identify cell subsets with differential LFA-1 activation states

    • Apply statistical methods appropriate for the experimental design and data distribution

These analytical approaches enable researchers to extract meaningful quantitative insights from AL-57 binding experiments.

What factors might cause inconsistent results when using AL-57?

Several factors can contribute to inconsistent results when using AL-57, and researchers should address these methodological issues:

  • Divalent cation fluctuations:

    • Small variations in Mg²⁺ concentration can significantly affect AL-57 binding

    • Inconsistent EGTA concentrations may lead to variable Ca²⁺ chelation and thus LFA-1 activation state

    • Use precisely prepared buffers and include appropriate controls in each experiment

  • Cell activation status:

    • Spontaneous activation during cell preparation can increase baseline AL-57 binding

    • Variability in cell handling and processing time affects activation state

    • Standardize cell isolation protocols and minimize processing time

  • Antibody storage and handling:

    • Freeze-thaw cycles may affect AL-57 binding capacity

    • Improper storage temperature or buffer conditions can reduce activity

    • Aliquot antibodies and follow manufacturer recommendations for storage

  • Technical variability in flow cytometry:

    • Variations in instrument settings between experiments

    • Inconsistent gating strategies for identifying positive populations

    • Use standardized protocols, include fluorescence standards, and apply consistent gating criteria

  • Biological variability:

    • Donor-to-donor variation in LFA-1 expression and activation potential

    • Cell cycle or metabolic state affecting LFA-1 conformational dynamics

    • Include appropriate biological replicates and report variability metrics

Addressing these factors through rigorous experimental design and standardized protocols minimizes inconsistencies in AL-57-based experiments.

How can AL-57 help resolve contradictory findings about LFA-1 activation mechanisms?

AL-57's unique specificity for the high-affinity conformation of LFA-1 makes it a valuable tool for resolving contradictory findings about activation mechanisms:

  • Distinguishing expression vs. activation changes:

    • Use AL-57 in parallel with pan-LFA-1 antibodies like MHM24

    • This combination distinguishes between changes in total LFA-1 expression versus activation-specific changes

    • Helps resolve contradictions arising from measuring total protein without considering conformational state

  • Quantifying activation intermediates:

    • AL-57 binding patterns reveal that only ~10% of LFA-1 molecules adopt the high-affinity conformation even after agonist stimulation

    • This explains contradictory findings about the extent of LFA-1 activation in different experimental systems

    • Supports a model of heterogeneous LFA-1 activation rather than uniform conformational change

  • Dissecting activation pathway hierarchies:

    • Compare binding patterns of AL-57 with other conformation-specific antibodies

    • Map the sequence and interdependence of different conformational changes

    • Resolve contradictions about which activation pathways are primary versus secondary

  • Correlating structure with function:

    • Use AL-57 binding as a precise measure of I domain activation

    • Correlate this specific conformational change with functional outcomes

    • Determine which aspects of LFA-1 function require the high-affinity conformation versus other states

These approaches allow researchers to develop more nuanced models of LFA-1 activation that reconcile seemingly contradictory findings from different experimental systems.

What are the potential therapeutic applications of AL-57?

AL-57's specific targeting of the high-affinity conformation of LFA-1 presents several promising therapeutic applications:

  • Selective immunomodulation: By targeting only the activated form of LFA-1, AL-57 could potentially inhibit pathological immune responses while preserving normal immune surveillance functions . This selectivity might reduce side effects compared to antibodies that block all LFA-1 molecules regardless of activation state.

  • Inflammatory disease treatment: AL-57 effectively blocks LFA-1-mediated adhesion and lymphocyte proliferation, suggesting potential efficacy in treating inflammatory and autoimmune diseases where leukocyte trafficking and activation play key roles .

  • Diagnostic applications: The conformation-specific binding properties of AL-57 could be leveraged to develop diagnostic tools for diseases characterized by aberrant immune cell activation, potentially allowing for more targeted therapeutic approaches .

  • Research tool for drug development: AL-57 can serve as a prototype for developing small molecule drugs that selectively target the high-affinity conformation of LFA-1, potentially opening new avenues for therapeutic intervention .

The therapeutic potential of AL-57 is supported by its demonstrated ability to inhibit functional outcomes in experimental models, with potency comparable to established anti-LFA-1 antibodies like MHM24 .

What methodological approaches can advance AL-57 research?

Several methodological approaches can further advance AL-57 research and expand its applications:

  • Structural studies:

    • Use X-ray crystallography to determine the exact epitope of AL-57 on the I domain

    • Apply cryo-electron microscopy to visualize AL-57 binding to intact LFA-1 in different conformational states

    • This structural information would enhance understanding of the molecular basis of specificity

  • Advanced imaging techniques:

    • Employ single-molecule microscopy to track AL-57-labeled LFA-1 molecules during immune synapse formation

    • Use super-resolution microscopy to map the spatial distribution of activated LFA-1 on cell surfaces

    • These approaches would provide insights into the dynamics of LFA-1 activation in situ

  • Combinatorial antibody approaches:

    • Develop bispecific antibodies incorporating AL-57 binding specificity

    • Create antibody panels targeting different conformational epitopes on LFA-1

    • These tools would enable more comprehensive mapping of LFA-1 activation states

  • In vivo models:

    • Develop humanized mouse models suitable for testing AL-57 efficacy in disease conditions

    • Employ intravital microscopy with fluorescently labeled AL-57 to visualize activated LFA-1 in living tissues

    • These approaches would bridge the gap between in vitro findings and potential clinical applications

These methodological advances would enhance our understanding of LFA-1 biology and accelerate the development of AL-57-based therapeutic and diagnostic applications.

How can researchers optimize AL-57 immunostaining protocols?

To achieve optimal results with AL-57 immunostaining, researchers should consider these technical optimizations:

  • Buffer optimization:

    • Ensure consistent Mg²⁺ concentration (2 mM) in all buffers

    • Include 1% BSA to reduce non-specific binding

    • Maintain 0.05% sodium azide to preserve antibody integrity

    • Avoid calcium-containing buffers which inhibit the high-affinity conformation

  • Antibody concentration titration:

    • Perform serial dilutions to determine optimal antibody concentration

    • Test concentrations ranging from 0.1-10 μg/ml

    • Select the concentration that gives maximal specific signal with minimal background

  • Secondary antibody selection:

    • Use highly cross-adsorbed secondary antibodies to reduce non-specific binding

    • For flow cytometry, PE-conjugated anti-human IgG (H+L) provides excellent sensitivity

    • Consider direct conjugation of AL-57 for multicolor applications

  • Sample preparation considerations:

    • Process samples quickly to preserve native conformations

    • Avoid fixation prior to AL-57 staining as it may alter conformation-specific epitopes

    • Include viability dye to exclude dead cells which often give false-positive signals

Implementing these optimizations will maximize the signal-to-noise ratio and ensure reliable detection of the high-affinity LFA-1 conformation.

What are common pitfalls when interpreting AL-57 binding data?

Several common pitfalls can complicate the interpretation of AL-57 binding data:

  • Confusing activation with expression changes:

    • Increased AL-57 binding could reflect either increased activation or increased total LFA-1 expression

    • Always include total LFA-1 staining (e.g., with MHM24) to distinguish between these possibilities

  • Overlooking heterogeneity in activation:

    • Research shows that only ~10% of LFA-1 molecules adopt the high-affinity conformation even after stimulation

    • Mean fluorescence intensity (MFI) values may mask important population heterogeneity

    • Analyze data at both population and single-cell levels

  • Misinterpreting partial activation:

    • Different stimuli may induce various intermediate conformations

    • AL-57 detects only the fully activated I domain

    • Use multiple conformation-specific antibodies to fully characterize activation state

  • Neglecting kinetic considerations:

    • LFA-1 activation is dynamic and can change rapidly

    • Single timepoint measurements may miss important activation kinetics

    • Design time-course experiments to capture the full activation profile

  • Ignoring the impact of multivalent interactions:

    • When using multimeric ICAM-1 complexes in competitive binding assays, avidity effects can complicate interpretation

    • Consider both affinity and avidity components in blocking experiments

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