BAH1 Antibody

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Description

Introduction to BAH1 Antibody

The BAH1 antibody, specifically clone BAH-1, is a mouse monoclonal antibody that targets human megakaryocytic cells. It was initially proposed to be specific for human CD110, although its primary use is in detecting an 84 kDa antigen in DAMI cells, which are human megakaryocyte/erythroid progenitor cells . This antibody is utilized in various applications, including ELISA, flow cytometry, functional assays, immunoprecipitation, and Western blotting .

Applications:

  • ELISA (Enzyme-Linked Immunosorbent Assay): Used for detecting and quantifying the presence of specific antigens.

  • Flow Cytometry: Utilized for analyzing the physical and chemical characteristics of cells in a fluid as they pass through at least one laser.

  • Functional Assays: These are used to assess the biological activity of the target antigen.

  • Immunoprecipitation: A technique used to isolate proteins from a complex mixture.

  • Western Blotting: A laboratory technique used to detect and analyze proteins.

Characteristics:

  • Isotype: IgG1.

  • Species: Human.

  • Target: 84 kDa antigen in DAMI cells.

  • Clone: BAH-1.

Data Table: Applications of BAH1 Antibody

ApplicationDescription
ELISAQuantification of specific antigens.
Flow CytometryAnalysis of cell characteristics.
Functional AssaysAssessment of biological activity.
ImmunoprecipitationIsolation of proteins from complex mixtures.
Western BlottingDetection and analysis of proteins.

Future Directions:

  • Expanding Applications: Investigating the use of BAH1 antibody in additional assays or therapeutic contexts.

  • Combination Therapies: Exploring the potential of combining BAH1 with other antibodies or therapies to enhance its utility.

Product Specs

Buffer
Preservative: 0.03% ProClin 300; Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
14-16 weeks (Made-to-order)
Synonyms
BAH1 antibody; NLA antibody; At1g02860 antibody; F22D16.14E3 ubiquitin-protein ligase BAH1 antibody; EC 2.3.2.27 antibody; Protein BENZOIC ACID HYPERSENSITIVE 1 antibody; Protein NITROGEN LIMITATION ADAPTATION antibody; RING-type E3 ubiquitin transferase BAH1 antibody
Target Names
BAH1
Uniprot No.

Target Background

Function

The BAH1 antibody targets a protein that mediates E2-dependent protein ubiquitination. It plays a crucial role in the negative feedback regulation of salicylic acid (SA) accumulation, specifically within the context of SA-mediated responses. Furthermore, BAH1 is implicated in the broader regulation of SA, benzoic acid, and phenylpropanoid biosynthesis. Its function extends to controlling a plant's adaptability to nitrogen limitation by directing the phenylpropanoid metabolic flux towards induced anthocyanin synthesis.

Gene References Into Functions

Key Functional Aspects of BAH1 (based on cited literature):

  • E3 Ligase Activity and Immune Response: BAH1, possessing a zinc finger domain similar to DnaJ, exhibits E3 ligase activity and influences immune responses through ubiquitination-mediated regulation. It also regulates salicylic acid accumulation. (PMID: 29260303, PMID: 18753285)
  • Interaction with NRT1.7 and Phosphate Homeostasis: BAH1 interacts with NRT1.7 within the plasma membrane and plays a significant role in regulating the abundance of PHT1 proteins to maintain phosphate (Pi) homeostasis. This regulation is notably influenced by nitrate levels, suggesting a crucial role in nutrient sensing and response. (PMID: 28032637, PMID: 24122828, PMID: 21455488)
  • Nitrogen Limitation and Metabolic Flux: BAH1 is vital in mediating the plant's response to nitrogen limitation. It directs the phenylpropanoid metabolic flux towards the production of anthocyanins, contributing to the plant's adaptability under nitrogen-limiting conditions. (PMID: 17885809, PMID: 18552353)
  • Further Research: Additional studies highlight the interaction between BAH1 (also known as NLA) and DnaK in Escherichia coli, showcasing functional similarities across species. (PMID: 29260303)
Database Links

KEGG: ath:AT1G02860

STRING: 3702.AT1G02860.1

UniGene: At.22880

Subcellular Location
Nucleus speckle.
Tissue Specificity
High expression in roots and stems, medium in seedlings, flowers, rosette and cauline leaves, and very low in siliques. Detected in cotyledons, hypocotyls, pedicel, receptacle, pistil, sepal, filament of stamen and at the two ends of developing siliques.

Q&A

How does BAH1 antibody function in experimental systems?

Beyond its role as a cellular marker, BAH1 antibody demonstrates functional activity in experimental systems. Research has shown that BAH1 antibody can induce megakaryocytopoiesis of both mouse and human bone marrow cells in vitro . This functional property makes it not only a diagnostic tool but also a potential experimental intervention for studying megakaryocyte differentiation and platelet production pathways.
The antibody is typically provided in pre-diluted format for use at recommended volumes per test, with standard protocols using approximately 1 × 10^6 cells in a 100-μl experimental sample . This standardization facilitates reliable and reproducible results across different experimental settings.

What is the recommended protocol for using BAH1 as a MEP marker in flow cytometry?

When using BAH1 as a marker for Megakaryocyte-Erythroid Progenitor (MEP) cells, researchers should follow a specific gating strategy. As demonstrated in supplementary research data, CD34+ cells are first isolated from peripheral blood mononuclear cells (PBMCs) and cultured for approximately 4 days in appropriate media such as StemSpan supplemented with IL6 (10ng/ml), IL3 (1ng/ml), SCF (100ng/ml), and N-PLATE (50ng/ml, a thrombopoietin agonist) .
For flow cytometry analysis, living cells should be gated first, followed by identification of specific progenitor populations. The MEP population can be specifically identified using BAH1.1 in combination with other standard hematopoietic markers . This approach allows for clear separation of MEP cells from Common Myeloid Progenitors (CMPs) and Granulocyte-Monocyte Progenitors (GMPs).

How can the specificity of BAH1-labeled MEP populations be validated?

To confirm that BAH1-identified cells are indeed MEPs with both megakaryocytic and erythrocytic potential, researchers should conduct differentiation assays. A recommended validation protocol involves:

  • Isolating BAH1-positive cells through flow cytometry or magnetic separation

  • Culturing these cells in megakaryopoiesis-specific media (containing IL1β at 1ng/ml and N-PLATE at 50ng/ml) for 4-8 days

  • Assessing differentiation through flow cytometry for markers such as CD41a+CD42b- (megakaryoblasts) and CD41a+CD42b+ (megakaryocytes)

  • In parallel, culturing separate aliquots in erythropoiesis-specific media containing erythropoietin (2U/ml), stem cell factor (100ng/ml), and dexamethasone (1μM) for 8 days

  • Confirming erythroid differentiation by identifying CD71highCD235adim erythroblasts
    Successfully observing both lineages from BAH1-positive cells confirms their MEP identity and validates the specificity of the antibody.

What are critical quality control measures when working with BAH1 antibody?

When using BAH1 antibody, several quality control measures should be implemented:

  • Appropriate isotype controls: An isotype control should be used at the same concentration as the BAH1 antibody to identify non-specific binding .

  • Fluorochrome considerations: For fluorochrome-conjugated BAH1 (such as PE-conjugated versions), researchers should refer to the manufacturer's multicolor flow cytometry resources for optimal spectra and instrument settings to minimize spectral overlap with other fluorophores .

  • Sample preparation cautions: The antibody preparation may contain sodium azide, which requires careful handling. Dilute azide compounds in running water before disposal to prevent accumulation of potentially explosive deposits in plumbing .

  • Validation through functional assays: Beyond marker expression, validate BAH1-identified populations through functional assays such as colony formation or differentiation studies as described in section 2.2 .

How should samples be prepared for optimal BAH1 antibody staining?

For optimal staining results with BAH1 antibody:

  • Freshly isolated cells generally provide better resolution than frozen-thawed specimens.

  • For protein analysis in conjunction with flow cytometry, prepare cell lysates with appropriate buffers containing protease inhibitors (such as 1mM sodium orthovanadate) and determine protein concentrations using Bradford assay prior to SDS-PAGE separation .

  • For immunophenotyping via flow cytometry, standard blocking with 5% bovine serum albumin (BSA) before antibody incubation helps reduce non-specific binding .

  • When performing multicolor flow cytometry, careful titration of each antibody, including BAH1, is essential to optimize signal-to-noise ratios.

How can BAH1 antibody be integrated into comprehensive hematopoietic progenitor analysis?

For advanced hematopoietic research, BAH1 can be incorporated into multi-parameter analysis systems:

  • Co-expression analysis: BAH1 can be used in combination with other markers such as CD71 to create high-resolution maps of hematopoietic differentiation stages. This approach allows for more precise identification of progenitor subsets than either marker alone .

  • Time-course studies: Researchers can track the expression dynamics of BAH1-recognized antigens during hematopoietic differentiation to identify critical transition points in lineage commitment.

  • Single-cell analysis: Incorporating BAH1 into single-cell RNA-seq or mass cytometry panels can reveal heterogeneity within MEP populations that may not be apparent with conventional flow cytometry.

What is the relationship between BAH1 and functional studies of megakaryocyte differentiation?

BAH1 antibody has demonstrated capacity to induce megakaryocytopoiesis in both mouse and human bone marrow cells in vitro . This functional property suggests several research applications:

  • Mechanistic studies: Researchers can investigate the signaling pathways activated by BAH1 binding to better understand the molecular mechanisms of megakaryocyte differentiation.

  • Comparative studies: The antibody's effects can be compared with known thrombopoietin receptor agonists to identify similarities and differences in downstream effects.

  • Therapeutic potential exploration: The ability of BAH1 to induce megakaryocytopoiesis suggests potential applications in conditions characterized by thrombocytopenia, though this requires extensive further investigation.

How can researchers apply computational approaches to enhance BAH1-based studies?

For researchers interested in more advanced applications, computational methods can enhance BAH1 antibody-based studies:

  • Antibody design optimization: De novo computational approaches similar to those used for other antibodies can potentially be applied to optimize BAH1 binding properties. These approaches involve generating energetically favorable conformations via hot-spot-centric approaches and computing high shape complementarity conformations .

  • Binding site characterization: Computational modeling can help predict the precise epitope recognized by BAH1, which remains incompletely characterized.

  • Integration with systems biology: Data from BAH1-based cell sorting can be integrated with transcriptomic, proteomic, and epigenetic profiles to create comprehensive maps of megakaryocyte-erythroid differentiation.

What are the current uncertainties regarding BAH1 antibody specificity?

While BAH1 is widely used as an MEP marker, researchers should be aware of ongoing questions about its exact molecular target:

  • It was originally proposed that BAH1 was specific for human CD110 (c-Mpl/TPO-R), but more recent data suggests this may not be accurate .

  • The precise molecular identity of the antigen recognized by BAH1 on MEP cells remains incompletely characterized, which may affect interpretation of certain experimental results.

  • Researchers should maintain awareness of this uncertainty and include appropriate controls to ensure the validity of their findings when using BAH1 as a marker.

How should contradictory findings with BAH1 antibody be addressed in research?

When researchers encounter contradictory results using BAH1 antibody:

  • Antibody validation: Confirm the specificity of the particular BAH1 antibody lot using positive and negative control populations with known expression profiles.

  • Cross-validation: Use alternative MEP markers or functional assays to verify the identity of cell populations.

  • Context consideration: Consider whether differences in experimental conditions, tissue sources, or species might explain discrepancies in results.

  • Transparent reporting: Document and report any discrepancies thoroughly in publications to advance collective understanding of BAH1 biology.

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