BOR2 Antibody

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Description

BOR2 Protein: Functional Role and Mechanism

BOR2 (Boron Transporter 2) is a plasma membrane-localized efflux transporter responsible for boron (B) distribution in plant roots under boron-limited conditions. Its primary function is to transport boron from symplast to apoplast, enabling the cross-linking of rhamnogalacturonan-II (RG-II) in cell walls, which is essential for root elongation and structural integrity .

Key Features of BOR2:

PropertyDescription
LocalizationPlasma membrane (polarized in root epidermal cells and lateral root caps)
ExpressionHighest in root elongation zones and lateral root caps
FunctionBoron efflux for RG-II cross-linking in cell walls
Mutant Phenotype68% reduction in root elongation under low boron (0.1 µM)
Interaction with BOR1Double mutants (bor1 bor2) exhibit severe growth defects in roots and shoots

Comparative Analysis of BOR2 and BOR1

ParameterBOR2BOR1
Primary RoleRoot cell elongation and RG-II cross-linkingXylem loading for boron distribution to shoots
Mutant ImpactSevere root growth defectsModerate shoot growth defects
Tissue SpecificityEpidermis and lateral root capsStele and endodermis

Research Implications

While BOR2 itself is not an antibody, its study provides insights into:

  • Plant Nutrient Transport: Mechanisms of boron allocation under nutrient stress.

  • Cell Wall Biology: Role of RG-II cross-linking in maintaining cell wall rigidity.

  • Agricultural Applications: Potential engineering of boron-efficient crops .

Antibody-Related Databases and Resources

Though no "BOR2 Antibody" exists, antibody research platforms and databases include:

  • SAbDab: Structural Antibody Database for annotated antibody structures .

  • CoV-AbDab: Catalog of coronavirus-binding antibodies .

  • The Antibody Society: Therapeutic antibody development tracking .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
BOR2 antibody; At3g62270 antibody; T17J13.230Probable boron transporter 2 antibody
Target Names
BOR2
Uniprot No.

Target Background

Function
BOR2 is a probable boron transporter. Boron is an essential element for maintaining the structural integrity of plant cell walls.
Gene References Into Functions
  1. Under boron-limited conditions, the transport of boric acid/borate by BOR2 from the symplast to the apoplast is crucial for effective cross-linking of rhamnogalacturonan II within the cell wall and subsequent root cell elongation. [BOR2] PMID: 24114060
Database Links

KEGG: ath:AT3G62270

STRING: 3702.AT3G62270.1

UniGene: At.34147

Protein Families
Anion exchanger (TC 2.A.31.3) family
Subcellular Location
Membrane; Multi-pass membrane protein.

Q&A

What is ERBB2 and why is it a significant research target?

ERBB2 (also known as HER2) is a receptor tyrosine-protein kinase also designated as CD340. It functions as a critical component in cell signaling pathways that regulate cellular growth, differentiation, and survival. ERBB2 has gained significant research attention because of its role in multiple cancer types, particularly breast cancer, where overexpression occurs in approximately 20-30% of cases. The protein has a calculated molecular weight of approximately 138 kDa, though it typically appears at around 185 kDa on Western blots due to post-translational modifications . Research targeting ERBB2 has led to the development of multiple therapeutic antibodies that have substantially improved treatment outcomes for HER2-positive cancers.

What are the key considerations when selecting an anti-ERBB2 antibody for research?

When selecting an anti-ERBB2 antibody, researchers should consider several factors:

  • Specificity: Confirm the antibody has been validated for your specific application with minimal cross-reactivity to other proteins. Premium grade antibodies like Picoband™ typically offer superior quality with high affinity and minimal background .

  • Host species: Common options include rabbit (as in the Picoband anti-ERBB2 antibody), which offers high sensitivity but consider compatibility with your experimental system .

  • Clonality: Polyclonal antibodies like the A00010-2 provide good sensitivity across multiple epitopes, while monoclonal antibodies offer consistency between lots .

  • Application validation: Ensure the antibody has been validated for your specific applications (e.g., IHC, WB) .

  • Immunogen information: Understanding the immunogen sequence helps predict potential cross-reactivity issues and epitope availability under different experimental conditions .

What are the validated research applications for anti-ERBB2 antibodies?

Anti-ERBB2 antibodies have been validated for multiple research applications:

ApplicationKey ConsiderationsTypical Dilutions
Western Blot (WB)Reducing conditions may affect epitope recognition1:500-1:2000
Immunohistochemistry (IHC)Fixation method impacts epitope preservation1:50-1:200
Immunoprecipitation (IP)Binding strength affects pull-down efficiency2-5 μg per sample
Flow CytometrySurface vs. intracellular staining protocols differ1:50-1:100

The Boster Bio Anti-ErbB2 antibody (A00010-2) has been specifically validated for WB and IHC applications with human samples .

What are the optimal protocols for reconstitution and storage to maintain antibody activity?

For lyophilized antibodies like the Picoband anti-ERBB2:

  • Reconstitution: Add 0.2 ml of distilled water to achieve a concentration of 500 μg/ml .

  • Short-term storage: Store at 4°C for up to one month after reconstitution .

  • Long-term storage: Store lyophilized antibody at -20°C for up to one year from the date of receipt .

  • Aliquoting recommendations: After reconstitution, prepare small aliquots and store at -20°C for up to six months to avoid repeated freeze-thaw cycles that degrade antibody performance .

  • Stability considerations: The antibody formulation contains 4 mg Trehalose, 0.9 mg NaCl, and 0.2 mg Na₂HPO₄ to enhance stability during storage .

How should anti-ERBB2 antibodies be validated for experimental reproducibility?

A robust validation approach includes:

  • Positive and negative controls: Use cell lines with known ERBB2 expression levels (e.g., SKBR3 as positive; MCF7 as negative or low expression).

  • Peptide competition assays: Pre-incubation with the immunizing peptide should eliminate specific signal.

  • Multiple detection methods: Confirm findings using alternative techniques (e.g., validate WB results with IHC).

  • Knockdown/knockout validation: Use siRNA or CRISPR to reduce target expression and confirm signal reduction.

  • Molecular weight verification: For Western blots, confirm that the detected band appears at the expected molecular weight (approximately 185 kDa for ERBB2) .

  • Citation review: Examine published studies using the same antibody to assess consistency across research groups.

How do bispecific antibodies targeting ERBB2 differ from conventional antibodies?

Bispecific antibodies (bsAbs) targeting ERBB2 differ from conventional monospecific antibodies in several important ways:

  • Dual targeting capability: bsAbs can simultaneously bind to ERBB2 and a second target (e.g., CD3 on T-cells, or another tumor-associated antigen), enabling novel mechanisms of action .

  • Structural complexity: bsAbs employ various formats including:

    • Symmetric formats: HC₂LC₂ structures with exogenous binding domains

    • Asymmetric formats: Requiring heterodimerization of different heavy chains

  • Engineering considerations:

    • Linker selection: Glycine-serine linkers of 10-25 amino acids are commonly used for fusion of binding domains due to favorable flexibility .

    • Domain orientation: The relative orientation of targeting domains significantly impacts function. Studies show orientation can dramatically affect binding capacity - for example, fusion of anti-HER2 scFv to an anti-PD1 IgG scaffold results in reduced HER2 binding compared to the reverse orientation .

  • Affinity balancing: The relative binding affinities between the different antigen-binding arms must be carefully optimized. For ERBB2-targeting bsAbs, this balance affects both efficacy and selectivity .

What factors influence antigen binding in anti-ERBB2 antibody research?

Several factors can affect antigen binding in anti-ERBB2 antibody experiments:

How does linker design impact bispecific antibody functionality in ERBB2 research?

Linker design is critical for bispecific antibody function targeting ERBB2:

What are common causes of high background when using anti-ERBB2 antibodies?

High background in anti-ERBB2 antibody applications can result from several factors:

  • Antibody concentration: Excessive antibody concentrations increase non-specific binding. For premium antibodies like Picoband, lower concentrations may be sufficient to achieve strong specific signals while minimizing background .

  • Blocking inadequacies: Insufficient blocking allows antibody binding to non-specific sites. Optimize blocking buffer composition (BSA, non-fat milk, normal serum) and duration.

  • Washing protocols: Inadequate washing between steps leaves excess unbound antibody. Increase wash duration or number of washes with appropriate buffers.

  • Detection system sensitivity: Overly sensitive detection systems amplify both specific and non-specific signals. Adjust substrate incubation time or consider alternative detection methods.

  • Sample preparation issues: Improper fixation or permeabilization can increase non-specific binding sites. Optimize protocols for your specific sample type.

  • Cross-reactivity: Though the Boster Bio anti-ERBB2 antibody is designed for minimal cross-reactivity , validate specificity with appropriate controls.

How can researchers optimize immunohistochemistry protocols using anti-ERBB2 antibodies?

Optimizing IHC protocols for anti-ERBB2 antibodies involves:

  • Antigen retrieval optimization:

    • Test multiple retrieval methods (heat-induced vs. enzymatic)

    • Compare citrate buffer (pH 6.0) vs. EDTA buffer (pH 9.0)

    • Optimize retrieval duration and temperature

  • Antibody dilution series:

    • Perform a titration series to determine optimal antibody concentration

    • Balance sufficient signal strength with minimal background

    • Consider extended incubation at lower concentrations for improved signal-to-noise ratio

  • Detection system selection:

    • Compare sensitivity of different detection systems (ABC, polymer-based)

    • Match detection system sensitivity to target expression level

    • Consider signal amplification methods for low-abundance targets

  • Counterstaining adjustments:

    • Optimize counterstain intensity to maintain visibility of positive signals

    • Adjust dehydration and clearing steps to preserve staining quality

  • Protocol validation:

    • Include positive control tissues with known ERBB2 expression

    • Use negative controls (omitting primary antibody and using tissues known to lack ERBB2)

    • Compare results with established scoring systems for consistency

What methodological approaches help resolve contradictory experimental findings?

When faced with contradictory results in anti-ERBB2 antibody experiments:

  • Antibody validation reconfirmation:

    • Verify antibody specificity through Western blot analysis

    • Conduct peptide competition assays to confirm specificity

    • Test alternative validated antibodies targeting different epitopes

  • Experimental variable isolation:

    • Systematically evaluate each experimental variable (buffers, incubation times, temperatures)

    • Establish a standardized protocol with minimal variation between experiments

    • Document all experimental conditions meticulously

  • Cross-methodology validation:

    • Compare results across different techniques (IHC, WB, flow cytometry)

    • Correlate protein detection with mRNA expression data

    • Consider orthogonal approaches (fluorescence in situ hybridization for gene amplification)

  • Biological context consideration:

    • Evaluate impact of cell/tissue type on ERBB2 expression and detection

    • Consider effects of treatment conditions on epitope accessibility

    • Assess potential post-translational modifications affecting antibody binding

  • Collaborative verification:

    • Engage colleagues to independently reproduce protocols

    • Consider multi-laboratory validation for critical findings

    • Consult with antibody manufacturers regarding technical support

How are bispecific antibodies advancing ERBB2-targeted therapeutic research?

Bispecific antibodies represent a significant advancement in ERBB2-targeted research:

  • Immune cell engagement: Bispecific antibodies targeting both ERBB2 and immune cell receptors (e.g., CD3) can redirect T cells to attack ERBB2-expressing tumor cells .

  • Dual pathway inhibition: bsAbs targeting ERBB2 and complementary oncogenic pathways can simultaneously block multiple signaling networks critical for tumor survival.

  • Engineering advancements: Recent developments in bsAb design have addressed traditional limitations:

    • Improved stability and reduced aggregation using single-domain antibodies (sdAbs) instead of scFvs

    • Enhanced manufacturing consistency through simplified HC₂LC₂ formats that reduce mispairing issues

    • Better tumor selectivity through careful affinity tuning between binding domains

  • Mechanistic modeling: The development of computational models to predict optimal affinity relationships between binding domains is enabling more rational design approaches for ERBB2-targeting bispecific antibodies .

What role does antibody affinity play in experimental design and interpretation?

Antibody affinity has profound implications for ERBB2 research:

  • Detection sensitivity: Higher affinity antibodies generally provide better detection of low-abundance targets, but may show more restricted epitope recognition.

  • Epitope-specific responses: Different epitopes on ERBB2 may show variable accessibility depending on protein conformation or interaction partners.

  • Bispecific antibody design: For bispecific constructs, the relative binding affinities between the different antigen-binding arms must be carefully balanced:

    • T cell-engaging bispecific antibodies require precise affinity tuning to optimize both efficacy and selectivity

    • Mechanistic modeling approaches help understand this affinity interplay to guide rational design

  • Experimental implications:

    • Antibody affinity affects optimal concentration, incubation time, and washing stringency

    • High-affinity antibodies may require more stringent washing to reduce background

    • Low-affinity antibodies may require extended incubation times or higher concentrations

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