CAS1 Antibody

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Description

Definition and Types of CAS1 Antibodies

A. CRISPR-associated protein 1 (Cas1):

  • Role: A conserved endonuclease in prokaryotic CRISPR systems, essential for spacer acquisition during bacterial immunity .

  • Antibody Types:

    • Polyclonal antibodies (e.g., anti-RA Cas1) used in pull-down assays and Western blotting to study Cas1-Cas2 interactions .

    • Commercial clones targeting human BCAR1 (CAS1 synonym), validated for WB, IF, and IHC .

B. Caspase-1 (CASP1):

  • Role: A cysteine protease critical for inflammasome activation, pyroptosis, and cytokine maturation (IL-1β, IL-18) .

  • Antibody Types:

    • Monoclonal: Clone 5B10 (Thermo Fisher, 14-9832-82) detects pro- (42 kDa) and active (20 kDa) forms in WB .

    • Polyclonal: PA5-99390 (Thermo Fisher) targets cleaved Asp296 in Caspase-1 p20 .

    • KO-Validated: ab207802 (Abcam) and #2225 (Cell Signaling Technology) for specificity in human samples .

CRISPR Cas1 Antibodies:

  • Spacer Acquisition: Cas1-Cas2 complexes require direct interaction for spacer integration, demonstrated via immunoprecipitation in Riemerella anatipestifer .

  • Nuclease Activity: RA Cas1 degrades dsDNA in a Mn²⁺-dependent manner; mutations (E149A, H206A, E221A) abolish activity .

Caspase-1 Antibodies:

  • Inflammasome Activation:

    TargetFunctionAntibody UsedCitation
    Pro-IL-1βCleavage into active IL-1βMAB62151 (R&D Systems)
    Gasdermin DPyroptosis inductionab207802 (Abcam)
    Caspase-7Plasma membrane repairPA5-99390 (Thermo)
  • Substrate Detection: Antibody CJ11 enriches cleaved iCasp substrates (IL-18, GSDMD) in LPS-stimulated macrophages .

Applications in Research

  • Western Blot:

    • MAB62151 detects Caspase-1 at 48 kDa in THP-1 and A431 lysates .

    • PA5-99390 identifies cleaved p20 in inflammasome-activated cells .

  • Immunofluorescence:

    • Clone 5B10 localizes Caspase-1 to the cytoplasm in J774 cells .

    • MAB6215 (R&D Systems) visualizes cytoplasmic Caspase-1 in THP-1 monocytes .

Recent Advances

  • Caspase Substrate Profiling: Antibody CJ11 enables selective detection of cleaved inflammasome substrates (e.g., GSDMD, IL-18) via immunoprecipitation .

  • CRISPR-Cas1 Dynamics: Anti-Cas1 antibodies reveal evolutionary links between Cas1-Cas2 complexes and toxin-antitoxin systems .

Limitations and Considerations

  • Cross-Reactivity: Some Caspase-1 antibodies (e.g., 5B10) may detect multiple isoforms .

  • Species Specificity: Anti-RA Cas1 antibodies are non-reactive in mammalian systems .

Product Specs

Buffer
**Preservative:** 0.03% Proclin 300
**Constituents:** 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
CAS1 antibody; CYC antibody; At2g07050 antibody; T4E14.16 antibody; Cycloartenol synthase antibody; AtCYC antibody; EC 5.4.99.8 antibody; 2,3-epoxysqualene--cycloartenol cyclase antibody
Target Names
CAS1
Uniprot No.

Target Background

Function
CAS1 Antibody is an essential enzyme in the biosynthesis of sterols. It catalyzes the conversion of oxidosqualene to cycloartenol and 1% parkeol. This function is crucial for plastid biogenesis and male gametophyte function.
Gene References Into Functions
  1. Virus induced gene silencing (VIGS) based on gene specific sequences from Nicotiana tabacum CAS1 or derived from the Sol Genomics Network (http://solgenomics.net/) was employed to investigate the specific roles of CAS1. PMID: 25343375
  2. A series of allelic mutants revealed distinct functions for Arabidopsis cycloartenol synthase 1 in cell viability and plastid biogenesis. PMID: 18287026
Database Links

KEGG: ath:AT2G07050

STRING: 3702.AT2G07050.1

UniGene: At.10550

Protein Families
Terpene cyclase/mutase family
Tissue Specificity
Expressed in roots, stems, leaves, inflorescences and siliques.

Q&A

What is Caspase-1 and why is it important to study?

Caspase-1, also known as IL-1 beta-converting enzyme (ICE), is an aspartic protease that plays a critical role in inflammatory responses and apoptosis. The enzyme exists as an inactive precursor (approximately 45-50 kDa) that, upon activation, forms a complex of two 20 kDa and two 10 kDa subunits. Caspase-1 is essential for the proteolytic cleavage of interleukin-1 beta (IL-1β) precursor to form the active proinflammatory cytokine. Additionally, it activates interleukin-18 (IL-18) and initiates pyroptosis, a programmed lytic cell death pathway, through cleavage of Gasdermin D . The central role of Caspase-1 in inflammation makes it a significant target for research on inflammatory diseases, immune responses, and cell death mechanisms.

What types of Caspase-1 antibodies are available for research?

Researchers can access several types of Caspase-1 antibodies for different experimental applications:

Antibody TypeExamplesHost SpeciesApplicationsTarget Species Reactivity
MonoclonalMAB62151 (Clone #1021430)MouseELISA, Western BlotHuman
MonoclonalMAB6215MouseWestern Blot, ICCHuman, Mouse, Rat
Polyclonal22915-1-APRabbitWB, IHC, IF, IP, ELISAHuman
PolyclonalBiCell Cat No. 10301RatIF, IHC, WBHuman, Mouse, Rat

These antibodies recognize different epitopes and demonstrate varying cross-reactivity with species, making selection critical based on your experimental design .

How can I determine if a Caspase-1 antibody is suitable for my specific application?

To determine suitability, multiple factors must be evaluated systematically. First, verify the validation data for your application of interest (Western blot, immunohistochemistry, ELISA, etc.) in the antibody datasheet. Check the recommended dilutions for each application; for example, antibody 22915-1-AP is recommended at 1:2000-1:12000 for Western blot but 1:100-1:400 for immunohistochemistry . Second, confirm reactivity with your species of interest; some antibodies like MAB62151 are human-specific, while others like BiCell's antibody react with human, mouse, and rat samples . Third, review published literature using the antibody to assess performance in conditions similar to your experiment. Finally, consider the epitope recognized by the antibody, especially when studying specific Caspase-1 isoforms or activated versus precursor forms .

What are the optimal conditions for Western blot detection of Caspase-1?

Successful Western blot detection of Caspase-1 requires specific methodological considerations. Based on validated protocols, optimal conditions include:

  • Sample preparation: Lysates from cells like THP-1, A431, or primary immune cells should be prepared under reducing conditions using appropriate lysis buffers (Immunoblot Buffer Group 1 has been validated with MAB62151) .

  • Expected molecular weights: Probe for bands at multiple molecular weights - the inactive precursor appears at approximately 45-48 kDa, while the cleaved active subunits appear at approximately 20 kDa (p20) and 10 kDa (p10) .

  • Antibody dilutions: For MAB62151, a concentration of 2 μg/mL is recommended, while 22915-1-AP works effectively at 1:2000-1:12000 dilution .

  • Detection system: HRP-conjugated secondary antibodies like Anti-Mouse IgG (HAF018) or Anti-Rabbit IgG followed by chemiluminescent detection yield optimal results .

  • Validation control: Include a negative control (Caspase-1 knockout cell line) to confirm antibody specificity, as demonstrated with the A431 Caspase-1 knockout cell line in validation studies .

For highest specificity, protocols should be conducted under reducing conditions with proper membrane blocking and validated cell lines.

How can Caspase-1 activity be distinguished from protein expression in experimental systems?

  • Substrate cleavage assays using fluorogenic peptide substrates that release fluorescent molecules upon Caspase-1-mediated cleavage.

  • Detection of cleaved products: Measure processed IL-1β (17 kDa) and IL-18, which indicate functional Caspase-1 activity.

  • Detection of p20 and p10 subunits (20 kDa and 10 kDa bands) via Western blot, which specifically indicate the cleaved, active form of Caspase-1 .

  • Pyroptosis assessment through LDH release or membrane integrity assays, as Caspase-1 activation triggers Gasdermin D cleavage and subsequent cell death .

  • Inflammasome complex formation through co-immunoprecipitation studies using Caspase-1 antibodies to pull down associated proteins.

A comprehensive approach combining protein detection with functional readouts provides the most complete picture of Caspase-1 biology in experimental systems.

What cell lines and tissue samples are recommended for Caspase-1 antibody validation?

For rigorous validation of Caspase-1 antibodies, specific cell lines and tissue samples have been empirically established as reliable positive controls:

Sample TypeValidated ExamplesApplicationsNotes
Human Cell LinesTHP-1 (monocytic leukemia), A431 (epithelial carcinoma), Jurkat, HeLa, HepG2, MCF-7, U-937WB, ICC, IFTHP-1 cells particularly useful as they express high levels of Caspase-1
Mouse Cell LinesNIH-3T3 (embryonic fibroblast)WBValidated with MAB6215
Rat Cell LinesRat-2 (embryonic fibroblast), PC-12WBValidated with MAB6215 and 22915-1-AP
Human TissuesSpleen tissueIHCRecommended for 22915-1-AP

When validating a new antibody, using a Caspase-1 knockout cell line (such as the validated Caspase-1 knockout A431 line) provides a critical negative control to confirm specificity . For immunohistochemistry, antigen retrieval techniques significantly impact results, with TE buffer pH 9.0 recommended for optimal epitope exposure .

How can Caspase-1 antibodies be used to study inflammasome activation?

Caspase-1 antibodies serve as essential tools for investigating inflammasome complex formation and activation through multiple sophisticated approaches. For immunoprecipitation-based studies, researchers can use Caspase-1 antibodies to pull down the entire inflammasome complex, enabling identification of associated proteins such as NLRP3, ASC, and NLRC4 in different activation states. In proximity ligation assays, combining Caspase-1 antibodies with antibodies against other inflammasome components allows visualization of protein-protein interactions within the complex at subcellular resolution .

For dynamic studies of inflammasome activation, researchers can employ time-course experiments using Caspase-1 antibodies to track the transition from pro-Caspase-1 (45-48 kDa) to cleaved, active forms (p20 and p10 subunits) following stimulation with PAMPs and DAMPs like LPS, ATP, or nigericin . Immunofluorescence microscopy using validated antibodies like the BiCell Scientific polyclonal (1:100 dilution) enables visualization of inflammasome "specks" - large protein aggregates that form during activation and serve as platforms for Caspase-1 processing .

To confirm functional activation, correlate antibody-based detection of cleaved Caspase-1 with measurement of downstream effectors such as mature IL-1β secretion, IL-18 processing, and Gasdermin D cleavage across multiple timepoints after inflammasome activation.

What are the considerations for multiplexing Caspase-1 antibodies with other inflammatory markers?

Multiplexing Caspase-1 antibodies with other inflammatory markers requires careful experimental design to avoid technical issues and ensure valid data interpretation. When selecting antibody combinations, prioritize antibodies from different host species to prevent cross-reactivity of secondary detection reagents. For example, a mouse anti-human Caspase-1 (MAB62151) can be effectively paired with rabbit antibodies against IL-1β or NLRP3 .

For multicolor immunofluorescence panels, consider the spectral properties of fluorophores to minimize bleed-through. Sequential staining protocols may be necessary when using multiple primary antibodies from the same host species, employing complete blocking steps between applications. When multiplexing in flow cytometry, thorough compensation controls must be established, particularly when assessing both surface markers and intracellular Caspase-1.

For co-localization studies combining Caspase-1 with other inflammasome components, initial single-staining controls are essential to establish baseline signal patterns before attempting co-localization analysis. Western blot multiplexing requires careful selection of primary antibodies that recognize proteins of substantially different molecular weights to prevent ambiguous band interpretation. For example, antibodies detecting Caspase-1 (45-48 kDa) can be readily distinguished from those targeting processed IL-1β (17 kDa) .

How do post-translational modifications affect Caspase-1 antibody recognition?

Post-translational modifications (PTMs) of Caspase-1 can significantly impact antibody binding and recognition, creating potential analytical challenges and opportunities. Phosphorylation of specific serine and tyrosine residues within Caspase-1 can inhibit its activation and may mask antibody epitopes. Studies should evaluate whether antibodies detect phosphorylated Caspase-1 with the same efficiency as non-phosphorylated forms, particularly when investigating regulatory mechanisms.

Ubiquitination and SUMOylation of Caspase-1 affect its stability and cellular distribution, potentially altering antibody accessibility to target epitopes. For comprehensive detection, researchers should verify whether their selected antibody recognizes modified forms by comparing detection patterns under conditions that promote or inhibit these modifications. Additionally, proteolytic processing of pro-Caspase-1 into p20 and p10 subunits fundamentally alters protein structure, making epitope-specific antibodies critical for distinguishing activation states .

When designing experiments to investigate PTMs, consider using antibodies specifically raised against modified forms (phospho-specific antibodies) in combination with standard Caspase-1 antibodies. Western blot analysis under non-reducing versus reducing conditions can help distinguish disulfide-bonded forms. For definitive characterization of PTM effects on antibody recognition, mass spectrometry analysis of immunoprecipitated Caspase-1 provides the most comprehensive approach to correlating modifications with detection patterns.

What controls should be included when using Caspase-1 antibodies in research?

Implementing comprehensive controls is essential for generating reliable and interpretable data with Caspase-1 antibodies. The following controls should be systematically incorporated:

  • Positive controls: Include cell lines with verified Caspase-1 expression, such as THP-1 human monocytic leukemia cells, which express abundant Caspase-1 and show consistent detection patterns .

  • Negative controls: Utilize Caspase-1 knockout cell lines, such as the validated Caspase-1 knockout A431 cell line, which demonstrates complete absence of the specific 48 kDa band detected in parental A431 cells .

  • Loading controls: For Western blot applications, always include housekeeping proteins like GAPDH (as used in validation studies with MAB62151) to normalize for protein loading variations .

  • Isotype controls: Include matched isotype control antibodies at equivalent concentrations to the Caspase-1 antibody to identify potential non-specific binding, particularly in immunostaining applications.

  • Activation controls: When studying Caspase-1 activation, include both unstimulated samples and positive controls stimulated with established inflammasome activators like LPS/ATP.

  • Technical replicates: Perform at least three independent experiments with triplicate measurements to ensure reproducibility and enable statistical analysis.

  • Concentration gradients: Test multiple antibody dilutions (as recommended in product documentation: 1:2000-1:12000 for WB or 1:100-1:400 for IHC with 22915-1-AP) to establish optimal signal-to-noise ratios .

Implementing these controls provides critical context for data interpretation and helps distinguish genuine biological effects from technical artifacts.

How can researchers troubleshoot weak or non-specific Caspase-1 detection?

When encountering weak or non-specific Caspase-1 detection, a systematic troubleshooting approach can identify and resolve the underlying issues:

For Weak Signal:

  • Antibody concentration: Increase primary antibody concentration incrementally. For MAB62151, validated concentrations of 2 μg/mL have been established for Western blot applications .

  • Incubation conditions: Extend primary antibody incubation time (overnight at 4°C) and optimize temperature conditions.

  • Epitope retrieval: For IHC applications, compare citrate buffer (pH 6.0) versus TE buffer (pH 9.0) as recommended for antibody 22915-1-AP .

  • Detection system: Switch to more sensitive detection methods, such as enhanced chemiluminescence substrate for Western blot or amplification systems for IHC/ICC.

  • Protein extraction: Evaluate different lysis buffers, as Immunoblot Buffer Group 1 has been validated with MAB62151 for optimal extraction .

For Non-specific Signal:

  • Blocking optimization: Test different blocking reagents (BSA, normal serum, commercial blockers) and extend blocking time.

  • Washing stringency: Increase wash buffer stringency by adding additional detergent or salt.

  • Antibody validation: Verify antibody specificity using a Caspase-1 knockout control, as demonstrated with the A431 parental versus knockout cell line comparison .

  • Cross-reactivity assessment: Test the antibody on known negative samples or perform peptide competition assays.

  • Secondary antibody specificity: Ensure secondary antibodies match the host species of your primary antibody and consider using cross-adsorbed secondaries to reduce non-specific binding.

By systematically evaluating these parameters, researchers can optimize detection conditions while maintaining specificity for accurate Caspase-1 analysis.

How should contradictory results from different Caspase-1 antibodies be interpreted?

When faced with contradictory results from different Caspase-1 antibodies, researchers should implement a structured analytical approach to resolve discrepancies:

First, compare the epitope specificity of each antibody. Monoclonal antibodies like MAB62151 (targeting Asn120-Asp297) recognize specific epitopes and may detect only certain Caspase-1 isoforms or conformations, while polyclonal antibodies like 22915-1-AP may recognize multiple epitopes across the protein . Carefully review the immunogen information on antibody datasheets to identify potential binding region differences.

Second, evaluate antibody validation data comprehensively. The Western blot validation with Caspase-1 knockout A431 cells provides the gold standard for specificity assessment . If contradictory antibodies haven't been validated against genetic knockouts, their specificity may be questionable.

Third, consider activation state differences. Some antibodies preferentially detect pro-Caspase-1 (~45-48 kDa), while others may have higher affinity for cleaved, active forms (p20 and p10 subunits) . Analyze whether discrepancies align with differing detection of inactive versus active forms.

Fourth, implement orthogonal verification approaches. Confirm protein identity through techniques like mass spectrometry, or validate findings using genetic approaches (siRNA knockdown, CRISPR knockout) to clarify which antibody accurately reflects biological reality.

Finally, consult literature and antibody validation databases to determine if other researchers have documented similar discrepancies with the specific antibodies in question. Well-characterized antibodies with consistent performance across multiple studies should be weighted more heavily in data interpretation.

How can Caspase-1 antibodies contribute to single-cell analysis of inflammatory responses?

Caspase-1 antibodies are increasingly being adapted for cutting-edge single-cell analysis techniques, enabling unprecedented insights into inflammatory heterogeneity. In flow cytometry and mass cytometry (CyTOF) applications, antibodies against both pro-Caspase-1 and cleaved forms can distinguish individual cells at different activation states within heterogeneous populations. This approach reveals the surprising asynchrony of inflammasome activation even within seemingly uniform cell populations exposed to identical stimuli.

For single-cell imaging, fluorophore-conjugated Caspase-1 antibodies enable visualization of inflammasome speck formation at the individual cell level, providing spatial and temporal resolution of Caspase-1 activation dynamics. When combined with live-cell imaging techniques, this approach can track the progression from initial inflammasome nucleation to full Caspase-1 activation and subsequent pyroptotic cell death.

Emerging single-cell sequencing technologies paired with antibody-based methods (CITE-seq, REAP-seq) allow correlation of Caspase-1 protein levels with transcriptional states, uncovering regulatory networks governing inflammasome responses. For optimal single-cell applications, researchers should select antibodies validated for flow cytometry, such as those demonstrated effective in THP-1 cells for immunofluorescence applications .

Implementation requires careful optimization of fixation and permeabilization protocols to preserve epitope accessibility while maintaining cellular integrity. Cross-validation with functional readouts at the single-cell level (such as IL-1β secretion) strengthens interpretation of Caspase-1 antibody staining patterns in individual cells.

What are the considerations for using Caspase-1 antibodies in tissue-specific inflammasome research?

Tissue-specific inflammasome research using Caspase-1 antibodies requires tailored approaches to address the unique biological and technical challenges of different tissue environments. When selecting antibodies for tissue analysis, prioritize those validated for immunohistochemistry in relevant tissues, such as antibody 22915-1-AP which has been validated in human spleen tissue .

Tissue-specific optimization of antigen retrieval methods is critical, as epitope accessibility varies dramatically between tissues due to differences in fixation efficiency and extracellular matrix composition. For antibody 22915-1-AP, TE buffer pH 9.0 is recommended, though citrate buffer pH 6.0 provides an alternative option when working with challenging tissues .

Background autofluorescence presents a major challenge in tissues with high collagen content or lipofuscin accumulation (brain, heart). Implementing appropriate quenching protocols and selecting detection methods less affected by autofluorescence (enzymatic rather than fluorescent) can improve signal-to-noise ratios. For multiplex approaches investigating Caspase-1 alongside tissue-specific markers, tyramide signal amplification enables sequential staining with antibodies from the same host species.

When interpreting Caspase-1 staining patterns in tissues, account for cell type-specific baseline expression levels. Myeloid cells typically express higher Caspase-1 levels than epithelial or stromal cells, requiring adjustment of exposure settings and analysis thresholds. Validation through additional methodologies, such as single-cell RNA sequencing data from matching tissue regions, strengthens confidence in antibody-based findings in complex tissue environments.

How can Caspase-1 antibodies be used to investigate non-canonical Caspase-1 functions?

Beyond its canonical role in inflammasome signaling, Caspase-1 participates in numerous cellular processes where specialized antibody applications provide valuable investigative tools. For studying Caspase-1's involvement in unconventional protein secretion, antibodies like MAB62151 can be employed in subcellular fractionation studies followed by Western blot analysis to track Caspase-1 localization to secretory vesicles and membrane compartments .

To investigate Caspase-1's emerging roles in metabolism, co-immunoprecipitation with Caspase-1 antibodies (such as 22915-1-AP recommended for IP) followed by mass spectrometry enables identification of novel protein interactions with metabolic enzymes . For examining nuclear functions of Caspase-1, including potential roles in transcriptional regulation, immunofluorescence with validated antibodies like BiCell's Caspase-1 polyclonal antibody allows precise subcellular localization analysis under different cellular states .

Proximity ligation assays combining Caspase-1 antibodies with antibodies against suspected interaction partners provide in situ evidence of protein-protein interactions in their native cellular context. For functional studies, correlating antibody-detected Caspase-1 localization or activation with non-canonical endpoints (such as metabolic parameters, transcriptional changes) rather than traditional inflammasome readouts reveals new biological roles.

When investigating tissue-specific non-canonical functions, researchers should validate findings across multiple experimental systems (cell lines, primary cells, tissue samples) using complementary techniques (Western blot, immunostaining, functional assays) to establish robust evidence for novel Caspase-1 functions beyond inflammation.

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