CD4 (26-396) Human is a recombinant protein fragment corresponding to amino acid residues 26–396 of the human CD4 glycoprotein. This truncated form retains critical functional domains of the full-length CD4 molecule, including its extracellular immunoglobulin-like domains essential for interactions with MHC class II molecules and HIV-1 gp120 . It is widely used in immunological research, particularly for studying T-cell receptor signaling, HIV entry mechanisms, and immune cell interactions .
Amino Acid Range: 26–396 (omits the cytoplasmic tail and transmembrane region) .
Domains: Contains four extracellular immunoglobulin domains (D1–D4) critical for MHC-II binding and co-receptor function .
Post-Translational Modifications:
CD4 (26-396) serves as a primary receptor for HIV-1 gp120 binding, enabling mechanistic studies of viral entry and inhibition . Its glycosylated form (Sf9-produced) mimics native human CD4 more closely, making it valuable for structural analyses of gp120-CD4 interactions .
The protein facilitates investigations into T-cell receptor (TCR) signaling by stabilizing MHC-II–TCR complexes and enhancing LCK kinase recruitment . Researchers use it to dissect pathways leading to NF-κB and AP-1 activation .
CD4 (26-396) has been employed to generate monoclonal antibodies targeting the CD4-binding site (e.g., HmAb64), which show neutralizing activity against HIV-1 clades .
In a phase I trial, polyvalent gp120 vaccines using CD4-derived antigens elicited cross-reactive antibodies capable of neutralizing tier-2 HIV strains, highlighting its utility in immunogen design .
The protein is used in ELISA and flow cytometry to quantify CD4+ T-cells in HIV patients, aiding immune monitoring .
E. coli: Cost-effective, high yield (~0.25 mg/mL), but lacks glycosylation .
Sf9 Insect Cells: Provides mammalian-like glycosylation, essential for functional assays requiring native-like CD4 .
HIV Neutralization: CD4 (26-396) enabled isolation of HmAb64, a broadly neutralizing antibody from vaccinated humans .
T-Cell Signaling: Demonstrated that CD4’s D1 domain is indispensable for LCK recruitment and TCR activation .
Glycosylation Impact: Glycosylated CD4 (26-396) from Sf9 cells showed 20% higher gp120 binding affinity compared to non-glycosylated forms .
CD4 nadir, defined as the lowest historical CD4 cell count, has emerged as a significant predictor of neurocognitive outcomes in HIV-positive individuals, even after achieving viral suppression through antiretroviral therapy.
A comprehensive study of 1,525 HIV-positive participants revealed that 52% met criteria for global neuropsychological impairment (NPI), with 39% diagnosed with HIV-associated neurocognitive disorders (HAND) after excluding confounding conditions . The analysis demonstrated a significant association between CD4 nadir and neurocognitive status:
Neurocognitive Status | Median CD4 Nadir (IQR) | p-value vs. No NPI |
---|---|---|
No NPI (n=726) | 187 (58-324) | - |
HAD (n=27) | 77 (18-167) | 0.01 |
ANI (n=428) | 161 (37-282) | Not significant |
MND (n=148) | 163 (52-285) | Not significant |
HAD: HIV-associated dementia; ANI: Asymptomatic neurocognitive impairment; MND: Mild neurocognitive disorder; IQR: Interquartile range
The relationship appears most pronounced for more severe forms of HAND (HAD) but less consistent for milder forms (ANI, MND), suggesting a potential threshold effect where severe immunosuppression crosses a critical boundary for irreversible CNS damage .
CD4 recovery following antiretroviral therapy (ART) initiation follows distinct patterns that vary based on baseline CD4 count, age, and other factors. Understanding these recovery trajectories is crucial for evaluating treatment efficacy and prognosis.
A large-scale study of 1,070,900 individuals who initiated ART revealed that recovery to key CD4 thresholds required varying timeframes depending on baseline immunosuppression:
For individuals starting with CD4 counts <200 cells/μL:
Recovery to >200 cells/μL: mean 1.5 years (SD 1.1)
Recovery to >350 cells/μL: mean 1.9 years (SD 1.2)
For individuals with severe immunosuppression (CD4 <50 cells/μL):
Recovery to >200 cells/μL: mean 2.5 years (SD 0.9)
Recovery to >350 cells/μL: mean 4.4 years (SD 0.4)
The recovery profile typically shows a biphasic pattern with a rapid initial increase followed by a slower long-term phase. Age-stratified analysis after 5 years of combination ART showed predicted CD4 counts (cells/μL) of:
Age <35 years: 937 (95% CI: 901 to 972)
Age 35-50 years: 956 (95% CI: 927 to 985)
While absolute CD4 counts at 5 years were similar across age groups, the annual change in CD4 counts showed differences:
Age <35 years: +4 cells/μL (95% CI: -3 to 11)
Age 35-50 years: +1 cells/μL (95% CI: -5 to 6)
These findings highlight the importance of considering baseline CD4 count and age when evaluating CD4 recovery.
The reliability of self-reported CD4 nadir is a methodological concern in HIV research, as recall bias could potentially affect study outcomes. Evidence suggests that while not perfect, self-reported CD4 nadir values can be reasonably reliable under certain conditions.
A study examining CD4 nadir as a predictor of neurocognitive impairment addressed this limitation by analyzing a subset of participants who were followed longitudinally . The researchers focused on individuals who began the study reporting a nadir at least as high as their measured CD4 cell count at the first visit, then compared their subsequently reported nadir with actual measured values .
In this validation exercise, the difference between self-reported nadir and actual nadir was small (mean difference 28.6, SD 21.7) and not statistically significant . These findings suggest that while recall bias may exist, it does not appear to introduce systematic errors that would invalidate the use of self-reported nadir values.
Researchers should consider several strategies when working with self-reported CD4 nadir:
Verify with medical records when possible
Conduct sensitivity analyses with verified subsets
Implement statistical approaches to account for measurement error
Ensure consistent collection of nadir information across study timepoints
Consider the temporal relationship between nadir and ART initiation
These considerations enhance the validity of studies relying on self-reported immunological history.
Age significantly influences CD4 cell count recovery in HIV-positive individuals receiving antiretroviral therapy (ART), with important implications for treatment monitoring and expectations.
Analysis of long-term CD4 cell count trends demonstrated that while absolute CD4 counts after 5 years of treatment were similar across age groups, the trajectories and rates of change differed significantly. Statistical modeling revealed an interaction between age and duration of combination ART (cART) with a p-value of 0.0061, indicating that age meaningfully affects how CD4 counts evolve over time .
The annual change in CD4 counts (cells/μL) showed a clear age gradient:
Age <35 years: +4 (95% CI: -3 to 11)
Age 35-50 years: +1 (95% CI: -5 to 6)
This pattern suggests that younger individuals experience continued CD4 gains even after 5 years of treatment, while older individuals (>50 years) may experience gradual CD4 decline despite maintained viral suppression .
The mechanisms underlying these age-related differences likely involve:
Decreased thymic output with advancing age
Cumulative effects of immune activation and inflammation
Age-related changes in T-cell homeostasis
Potential interactions between HIV, antiretroviral medications, and normal immunosenescence
These findings highlight the importance of age-stratified analyses in CD4 recovery studies and suggest that treatment expectations and monitoring strategies may need adjustment based on patient age.
Analyzing CD4 count trajectories requires robust strategies to address numerous potential confounding variables. Researchers should implement comprehensive methodological approaches to strengthen causal inference.
Statistical techniques that effectively control for confounding include:
Multivariable regression models incorporating established confounders as covariates
Stratified analyses within homogeneous subgroups
Propensity score methods (matching, stratification, or weighting)
Marginal structural models for time-dependent confounding
Major confounding domains that require consideration:
Confounding Domain | Specific Factors | Mitigation Strategy |
---|---|---|
Demographic | Age, sex, ethnicity | Stratification and adjustment |
Clinical | Baseline CD4, viral load, AIDS-defining illnesses | Standardized measurement |
Treatment | ART regimen, adherence, prior exposure | Detailed history documentation |
Comorbidities | HCV, HBV co-infection | Systematic screening |
Lifestyle | Smoking, alcohol, substance use | Validated assessment tools |
Laboratory | Measurement platforms, timing | Standardization of procedures |
Research examining long-term CD4 cell count trends exemplifies effective confounding control, with models "adjusted for sex (ref=male), mode of HIV exposure (ref=MSM), HCV antibody (ref=no/not tested), year of cART initiation (ref=1996–1999) and prior usage of antiretroviral therapy (ref=no)."
For self-reported data (e.g., CD4 nadir), validation against documented laboratory measurements can strengthen validity. One approach is to "follow-up analyses including only impaired patients meeting HAND criteria, which eliminated such confounding conditions" such as head injury or developmental disability .
By systematically addressing these confounding variables, researchers can generate more valid inferences about CD4 count trajectories and their clinical implications.
Longitudinal CD4 count data presents specific analytical challenges due to its complex temporal patterns, inter-individual variability, and correlation structure. Several statistical approaches have demonstrated particular utility in this context.
Piecewise Mixed-Effects Linear Regression Models:
These models are especially valuable for CD4 count analysis because they:
Allow for different slopes during distinct phases of CD4 recovery
Account for inter-individual variability through random effects
Can incorporate time-varying covariates
Effectively capture the biphasic nature of CD4 recovery (rapid initial increase followed by slower long-term changes)
A large-scale study analyzing CD4 count recovery among over 1 million individuals employed "a multivariable piecewise mixed-effects linear regression model adjusting for age, gender, year of starting ART, viral suppression in follow-up and province" to predict CD4 counts during follow-up .
Proportional Hazards Models:
For analyzing time to reaching specific CD4 thresholds or events:
Cox models with time-updated CD4 values
Can incorporate stratification by key variables
Useful for estimating hazard ratios associated with CD4 recovery
Data from the Collaboration of Observational HIV Epidemiological Research Europe used "stratified multivariate Cox models to estimate the association between time updated CD4 cell count and a new AIDS event or death or death alone," finding that higher CD4 counts consistently associated with reduced risk of AIDS events or death (hazard ratio per 100 cells/μL: 0.35, 95% CI 0.30-0.40) .
Key considerations when selecting analytical approaches:
Account for non-linear CD4 recovery patterns
Handle irregularly spaced measurements
Address missing data appropriately
Model both population-average effects and individual trajectories
Consider CD4 as both a continuous variable and in clinically meaningful categories
These statistical approaches, when properly implemented, enable robust inference regarding CD4 count dynamics and their clinical implications.
While absolute CD4 cell counts provide valuable information, they offer limited insight into functional capacity. Advanced research requires techniques that characterize CD4 T-cell quality and activity beyond simple enumeration.
Functional Immunological Assays:
Intracellular Cytokine Staining (ICS):
Measures production of signature cytokines upon stimulation
Identifies polyfunctional T cells producing multiple cytokines
Provides insights into helper T cell polarization (Th1/Th2/Th17)
Proliferation Assays:
CFSE dilution tracking cell divisions upon antigen stimulation
3H-thymidine incorporation measuring DNA synthesis
Ki-67 expression analysis identifying actively proliferating cells
Immune Activation and Exhaustion Markers:
Flow cytometric analysis of activation markers (HLA-DR, CD38)
Assessment of exhaustion markers (PD-1, CTLA-4)
Determination of senescence markers (CD57)
Advanced Molecular Techniques:
Technique | Application | Research Advantage |
---|---|---|
Single-cell RNA sequencing | Transcriptional profiling | Reveals heterogeneity within CD4+ populations |
TCR repertoire analysis | Assessment of clonal diversity | Provides insights into antigen-specific responses |
Epigenetic profiling | Analysis of chromatin modifications | Identifies stable functional programming |
Metabolic profiling | Characterization of bioenergetics | Links metabolism to functional capacity |
Phospho-flow cytometry | Measurement of signaling activation | Assesses signal transduction efficiency |
For comprehensive evaluation of CD4 functionality, researchers should implement integrative approaches combining multiple assessment modalities, such as multi-parameter flow cytometry panels that simultaneously assess surface phenotypes, intracellular cytokines, transcription factors, and proliferation markers.
When implementing functional assays, methodological considerations include standardization of stimulation conditions, appropriate controls, sample handling protocols, and data normalization approaches.
These functional assessment techniques can reveal mechanisms underlying disease pathogenesis or treatment responses that would remain hidden with conventional CD4 counting.
The relationship between CD4 cell count, viral load, and clinical outcomes is complex and synergistic, with each marker providing complementary prognostic information.
Analysis of the Collaboration of Observational HIV Epidemiological Research Europe (COHERE) database examined this relationship in patients who achieved viral suppression while on combination antiretroviral therapy (cART) . During a median follow-up of 2.7 years of viral suppression, the mortality rate was 4.8 per 1,000 years .
Even among virally suppressed individuals, CD4 cell count remained a powerful predictor of outcomes. A higher CD4 cell count was consistently associated with reduced risk of new AIDS events or death, with a hazard ratio per 100 cells/μL increase of 0.35 (95% CI 0.30-0.40) for counts below certain thresholds .
Several methodological approaches can effectively examine the CD4-viral load interaction:
Joint modeling of CD4 and viral load trajectories
Analysis of viral load categories within CD4 strata
Investigation of CD4 recovery patterns based on viral suppression kinetics
Assessment of CD4 predictive value in contexts of complete vs. partial viral suppression
Research has demonstrated that the long-term trajectory of CD4 counts depends significantly on viral suppression status, with a statistical interaction between CD4 at 5 years of cART and duration of cART (p=0.0001) .
For optimal prediction of clinical outcomes, researchers should:
Consider both current and nadir CD4 values
Integrate viral load measurements (both current and area-under-the-curve)
Account for duration of viral suppression
Examine CD4/CD8 ratio as a complementary marker
Consider inflammatory biomarkers alongside traditional markers
This integrated approach provides more comprehensive risk stratification than either marker alone.
Studying CD4 recovery in resource-limited settings presents unique methodological challenges that require tailored approaches to ensure valid and generalizable findings.
A landmark study from South Africa's national HIV treatment program provides valuable insights into effective methodologies for these contexts. This research created a cohort of 1,070,900 HIV-positive individuals who initiated ART between 2010 and 2014 using a probabilistic record linkage algorithm to connect laboratory data from the National Health Laboratory Service .
Key methodological considerations include:
Data Collection and Management:
Leveraging existing healthcare infrastructure and laboratory networks
Implementing probabilistic matching algorithms to link fragmented records
Developing protocols for managing inconsistent data formats
Establishing quality control procedures for laboratory measurements
Creating standardized definitions for key variables (e.g., treatment initiation, viral suppression)
Study Design Adaptations:
Pragmatic cohort definitions based on available data (e.g., defining ART initiation based on CD4 count and viral load measurement patterns)
Flexible follow-up schedules that accommodate real-world care patterns
Statistical approaches that handle irregular measurement intervals
Methods for addressing potential selection bias due to differential loss to follow-up
Contextual interpretation of findings considering local treatment guidelines
Analytical Strategies:
The South African study employed "a multivariable piecewise mixed-effects linear regression model adjusting for age, gender, year of starting ART, viral suppression in follow up and province" to predict CD4 counts during follow-up . This approach effectively addressed the complex data structure and multiple confounding factors.
The study found that CD4 count recovery varied primarily with:
These findings aligned with results from resource-rich settings, suggesting that core biological processes of immune reconstitution are consistent across contexts, though the pace and completeness of recovery may differ due to various healthcare system factors.
Researchers working in resource-limited settings should design studies that balance methodological rigor with practical feasibility, leveraging existing data collection systems while implementing appropriate statistical techniques to address data limitations.
CD4, also known as T-cell surface glycoprotein CD4, is a critical protein in the immune system. It is primarily found on the surface of helper T cells, monocytes, macrophages, and dendritic cells. The CD4 molecule plays a significant role in the immune response by acting as a co-receptor that assists the T-cell receptor (TCR) in communicating with antigen-presenting cells (APCs).
The CD4 protein is a member of the immunoglobulin superfamily and consists of four extracellular domains (D1 to D4). The recombinant human CD4 (26-396) refers to a specific fragment of the CD4 protein, encompassing amino acids 26 to 396. This fragment includes the extracellular portion of the protein, which is crucial for its interaction with major histocompatibility complex (MHC) class II molecules.
CD4 functions primarily as a co-receptor that enhances the sensitivity of TCRs to antigens presented by MHC class II molecules. This interaction is essential for the activation of helper T cells, which in turn play a pivotal role in orchestrating the immune response by activating other immune cells, including B cells and cytotoxic T cells.
Recombinant human CD4 (26-396) is typically produced using various expression systems, such as HEK 293 cells or E. coli. The protein is expressed as a single, non-glycosylated polypeptide chain and is purified using chromatographic techniques to achieve high purity levels. For instance, the recombinant CD4 protein expressed in HEK 293 cells has a purity of ≥95% and an endotoxin level of ≤0.005 EU/µg . Similarly, the protein produced in E. coli is fused to a 25 amino acid His-tag at the N-terminus and purified to a purity greater than 85% .
Recombinant CD4 (26-396) is widely used in research to study the immune response, particularly the interactions between T cells and APCs. It is also utilized in the development of therapeutic agents and vaccines. The protein’s ability to bind to MHC class II molecules makes it a valuable tool for investigating the mechanisms of antigen presentation and T cell activation.