Here’s a structured FAQ for researchers working with CHE-13 antibody in academic contexts, based on experimental design and data analysis challenges:
Test 1:100–1:1,000 dilutions in fixation-dependent buffers (e.g., methanol vs. paraformaldehyde) .
Use knockout validation: Compare staining intensity in wild-type and che-13(−) tissues .
Quantify signal-to-noise ratios using imaging software (e.g., ImageJ).
Genetic: Include daf-19(−) mutants (lacking cilia transcription factor) to distinguish CHE-13-specific effects .
Technical: Parallel staining with anti-α-tubulin (cilia marker) and DAPI (nuclear counterstain) .
Phenotypic: Monitor chemotaxis defects (e.g., NaCl avoidance) to link molecular findings to organismal function .
| Observation | Interpretation | Follow-up Experiment |
|---|---|---|
| Partial overlap with OSM-5 | CHE-13 may load/unload at specific axonemal regions | Perform time-lapse imaging of dual-tagged strains |
| No colocalization with IFT-A markers | Supports complex B-specific role | Conduct sequential IP-MS to map interaction hierarchies |
Use Cohen’s kappa coefficient to assess inter-lab staining reproducibility.
Apply ANOVA with post-hoc tests for multi-condition cilia length measurements.
Share raw imaging data via repositories (e.g., BioImage Archive) for independent validation.
Compare CHE-13 localization patterns with human homolog ANPEP/CD13 .
Use structural modeling to map conserved residues (e.g., RFX-binding domains regulated by DAF-19) .
Cross-reference with ciliopathy databases (e.g., Ciliopathy Alliance) for phenotype-genotype correlations.