Applications : WB
Sample type: cells
Review: To validate the proteomics results, western blot was performed to evaluate the expression levels of ALDH1A2, CHGB, SUGP1, and GAPDH was selected as the internal reference protein.
Chromogranin B (CHGB), also known as Secretogranin-1 (SgI), is a major matrix protein in human catecholamine storage vesicles with a calculated molecular weight of 78 kDa, though it typically appears between 70-100 kDa on Western blots . CHGB exists in a dimorphic state, with both soluble and membrane-bound forms present in tissues such as bovine pancreas and rat pancreatic β-cells . The protein is crucial for the formation of secretory granules in neuroendocrine cells and plays a significant role in catecholamine storage and regulated secretion mechanisms . Recent research has revealed that CHGB is responsible for dominant anion conductances on the surface of neuroendocrine cells after regulated secretion, suggesting a multifunctional role beyond its storage capabilities .
CHGB antibodies are utilized across multiple experimental applications with specific validated protocols:
| Application | Recommended Dilution | Validated Samples |
|---|---|---|
| Western Blot (WB) | 1:1000-1:4000 | NIH/3T3 cells, mouse brain tissue, RAW 264.7 cells |
| Immunohistochemistry (IHC) | 1:20-1:200 | Human pancreas tissue, mouse pancreas tissue |
| Immunofluorescence (IF-P) | 1:50-1:500 | Mouse colon tissue |
| Flow Cytometry (FC) (Intra) | 0.40 μg per 10^6 cells in 100 μl | PC-12 cells |
| ELISA | Application-specific | Human, mouse, rat samples |
These applications enable researchers to detect and quantify CHGB in various experimental settings, from protein expression analysis to cellular localization studies . For optimal results, titration of the antibody concentration is recommended in each specific experimental system.
CHGB antibodies should be stored at -20°C where they remain stable for approximately one year after shipment . The typical storage buffer consists of PBS with 0.02% sodium azide and 50% glycerol at pH 7.3 . For smaller quantity antibodies (20μL), preparations may contain 0.1% BSA as a stabilizer . Unlike some antibodies, CHGB antibodies in glycerol buffer do not require aliquoting for -20°C storage, which minimizes freeze-thaw cycles that could potentially degrade antibody performance . When working with the antibody, allow it to equilibrate to room temperature before opening to prevent condensation that could introduce contaminants or accelerate degradation of the protein.
For Western blotting applications, CHGB antibodies typically work best at dilutions between 1:1000-1:4000 . Sample preparation is crucial—approximately 20 μg of total protein from cell lysates per lane is recommended for optimal detection . When preparing samples, cells should be lysed in an appropriate buffer (such as RIPA buffer) with protease inhibitors, incubated on ice for 30 minutes, and centrifuged at 18,000× g for 30 minutes to remove cellular debris . The expected molecular weight range for CHGB is 70-100 kDa, with variation depending on post-translational modifications and species differences . For detection, an HRP-conjugated secondary antibody appropriate for the host species (e.g., donkey-anti-goat for goat primary antibodies) combined with a chemiluminescent substrate such as Super Signal West Pico provides sensitive visualization .
For immunohistochemical applications, optimal antigen retrieval for CHGB detection involves using TE buffer at pH 9.0 . This alkaline buffer is particularly effective for exposing CHGB epitopes that may be masked during fixation processes. Alternatively, citrate buffer at pH 6.0 can be used if TE buffer yields suboptimal results in certain tissue types . The recommended dilution range for IHC applications is 1:20-1:200, with specific optimization required based on tissue type and fixation method . Both human and mouse pancreatic tissues have been successfully stained using these protocols, demonstrating the cross-species reactivity of well-characterized CHGB antibodies . Complete antigen retrieval protocol should include appropriate incubation times (typically 15-20 minutes) and controlled cooling periods to maximize epitope exposure while preserving tissue morphology.
CHGB knockdown can be achieved using siRNA transfection in neuroendocrine cell lines such as INS-1 cells or PC12 cells. An effective protocol involves:
Seed cells at 40% confluency one day before transfection
Transfect using RNAiMAX (Life Technologies) mixed with CHGB-targeting siRNA-SMART pool (e.g., M-099320-01-0005) at concentrations between 75-100 nM
Include non-specific siRNAs (scrambled from CHGB-specific sequences) as negative controls
Change to fresh medium 48 hours after transfection
Validate knockdown efficiency through:
For specificity validation, compare individual siRNAs from the mixture to identify the most effective sequences (e.g., 2nd and 4th siRNAs have shown greater effectiveness than 1st and 3rd in some studies) . Monitor potential compensatory mechanisms, as CHGB knockdown has been shown to increase expression of related proteins (CHGA by 35%, DBH by 243%) .
The dimorphic nature of CHGB presents a unique challenge for researchers studying its different forms. To differentiate between soluble and membrane-bound CHGB variants:
Sequential extraction protocol:
Subcellular fractionation:
Immunofluorescence approaches:
The tightly membrane-associated form of CHGB has been detected on the surface of PC-12 cells after stimulated granule release and is resistant to membrane dissociation under harsh conditions except when treated with detergents . This characteristic can be used to identify the membrane-bound population specifically.
Recent findings have established CHGB as a critical component in anion channel formation on neuroendocrine cell surfaces. To investigate this function:
Electrophysiological approaches:
Patch-clamp recordings to measure anion conductances in cells with modulated CHGB expression
Compare wild-type cells with CHGB knockdown cells during stimulated exocytosis
Assess channel sensitivity to chloride concentrations and DIDS (4,4'-Diisothiocyano-2,2'-stilbenedisulfonic acid), a known anion channel blocker
Protein reconstitution studies:
Structure-function analysis:
The high anion selectivity and sensitivity to chloride and DIDS observed in both native and recombinant CHGB-formed channels provide specific parameters for verification of CHGB-dependent conductances .
CHGB plays a multifaceted role in catecholamine dynamics that can be studied through several approaches:
Quantitative analysis of secretory granules:
Catecholamine uptake and storage assays:
Stimulated secretion studies:
In vivo models:
These methodologies help elucidate the bidirectional relationship between CHGB levels and catecholamine dynamics, providing insights into both the storage and feedback inhibition mechanisms.
CHGB antibodies frequently detect bands ranging from 70-100 kDa despite the calculated molecular weight of 78 kDa . This variability stems from several factors:
Post-translational modifications:
Species-specific differences:
Human versus rodent CHGB may display different migration patterns
Primary sequence variations affect apparent molecular weight
Sample preparation effects:
Technical variations:
Gel percentage affects resolution in different molecular weight ranges
Buffer systems (Tris-glycine vs. Tris-tricine) resolve proteins differently
Ladder calibration and gel running conditions introduce variability
When interpreting results, researchers should consider that cysteine-related variants, including disulfide isoforms and free cysteines, can significantly impact protein stability and function . IgG2 disulfide bond isoforms may affect potency, while higher amounts of free cysteines decrease thermal stability and can trigger formation of covalent aggregates .
When performing immunohistochemistry with CHGB antibodies, researchers may encounter several challenges:
Background staining issues:
Antigen retrieval optimization:
Tissue-specific considerations:
Human versus mouse pancreas tissues may require different protocols
Fixation duration affects epitope availability (shorter fixation often improves results)
Section thickness (5-7μm typically optimal) influences antibody penetration
Detection sensitivity:
For mouse colon tissue specifically, immunofluorescence applications work best at dilutions between 1:50-1:500, with careful optimization required for each new tissue type or fixation method .
Cross-reactivity is a critical consideration when working with antibodies against granin family proteins:
Validation strategies:
Test antibody specificity using CHGB knockout or knockdown samples
Perform peptide competition assays with the immunizing antigen
Compare multiple CHGB antibodies raised against different epitopes
Western blot specificity controls:
Sample preparation optimization:
Alternative approaches:
For critical experiments, validate findings with orthogonal detection methods
Consider mass spectrometry for unambiguous protein identification
Use genetic tagging approaches (e.g., FLAG/HA-tagged CHGB) when possible
When investigating CHGB's role in anion channel formation, verify antibody specificity by comparing electrophysiological recordings between wild-type and CHGB-depleted samples to confirm that observed conductances are truly CHGB-dependent .
CHGB genetic variation has been linked to alterations in catecholamine secretion and blood pressure regulation . To investigate these connections:
Genotype-phenotype correlation studies:
Screen for CHGB polymorphisms in patient cohorts with relevant conditions
Correlate genetic variants with biochemical markers of catecholamine dysregulation
Analyze blood pressure parameters in relation to specific CHGB genotypes
Functional characterization approaches:
Animal model development:
Therapeutic target identification:
This research direction may reveal new insights into hypertension pathophysiology and potentially identify novel therapeutic targets for cardiovascular and neuroendocrine disorders.
The discovery that CHGB exists in both soluble and membrane-bound forms presents unique research opportunities :
Structural biology approaches:
Membrane topology analysis:
Accessibility studies with membrane-impermeable labeling reagents
Protease protection assays to determine protein orientation
Glycosylation mapping to identify luminal versus cytoplasmic domains
Transition mechanisms:
Investigate conditions triggering conversion between soluble and membrane-bound forms
Study post-translational modifications affecting membrane association
Examine pH and calcium dependence of conformational changes
Functional consequences:
Compare properties of anion channels formed by different CHGB conformations
Investigate trafficking pathways for membrane-inserted CHGB
Determine whether dimorphism is regulated during different physiological states
These approaches will help elucidate how a primarily soluble granule protein can adopt a membrane-integrated conformation capable of forming functional ion channels, potentially revealing novel mechanisms of protein moonlighting.