CHX27 Antibody

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Description

Overview of CHX27 Antibody

CHX27 Antibody is a polyclonal antibody developed for research applications, specifically targeting the CHX27 protein in Arabidopsis thaliana (Mouse-ear cress). It is cataloged under the product code CSB-PA868089XA01DOA and is designed for use in Western blotting (WB) and other immunoassays .

Research Context and Applications

While CHX27 Antibody is explicitly listed in commercial catalogs, peer-reviewed studies detailing its functional role or experimental validation are not directly available in the provided sources. Based on homologous proteins in Arabidopsis thaliana, CHX27 is hypothesized to participate in ion transport or stress response pathways, given that other CHX (Cation/H+^+ Exchanger) family members regulate cellular pH and ion homeostasis .

Comparative Analysis with Related Antibodies

CHX27 Antibody belongs to a broader category of plant-specific antibodies. Below is a comparison with other Arabidopsis-targeting antibodies from the same catalog:

AntibodyTargetUniProt IDApplication
CHX27CHX27Q9M007WB
CHX3CHX3Q9FFB8WB
CHX5CHX5Q3EDG3WB, Immunofluorescence

Source: Cusabio

Limitations and Gaps in Current Knowledge

No direct experimental data (e.g., binding affinity, epitope mapping, or in planta functional studies) for CHX27 Antibody were identified in the reviewed literature. Further research is required to:

  • Validate its specificity and cross-reactivity.

  • Elucidate its role in plant physiology.

  • Explore its utility in non-model plant species.

Product Specs

Buffer
**Preservative:** 0.03% Proclin 300
**Constituents:** 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
CHX27 antibody; At5g01690 antibody; F7A7_210Cation/H(+) antiporter 27 antibody; Protein CATION/H+ EXCHANGER 27 antibody; AtCHX27 antibody
Target Names
CHX27
Uniprot No.

Target Background

Function
CHX27 Antibody may function as a cation/H(+) antiporter.
Database Links
Protein Families
Monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family, CHX (TC 2.A.37.4) subfamily
Subcellular Location
Membrane; Multi-pass membrane protein.
Tissue Specificity
Specifically expressed in pollen.

Q&A

What is CD27 and why is it a significant target for antibody therapy?

CD27 is a member of the TNF receptor superfamily that plays an important role in T-cell immunity while also serving as a cell-surface marker on various B- and T-cell malignancies. Its expression on these cancerous cells makes it an attractive target for monoclonal antibody (mAb) therapy . CD27 functions as a costimulatory molecule that enhances T-cell activation, proliferation, and survival when engaged with its ligand, CD70. The presence of CD27 on malignant cells provides a specific target for therapeutic antibodies that can direct immune responses against these cells or deliver cytotoxic effects directly . This dual role—being expressed on both immune cells and cancer cells—makes CD27-targeting antibodies particularly interesting for oncology research.

How are CD27-targeting antibodies generated for research purposes?

The development of CD27-targeting antibodies typically involves several methodological steps:

  • Immunization and Selection: Fully human monoclonal antibodies like 1F5 (CDX-1127) are generated using human Ig transgenic mice immunized with the target antigen .

  • Screening and Isolation: Following immunization, antibodies are screened for binding to CD27 using various techniques including ELISA and flow cytometry.

  • Cloning and Expression: The genetic sequences encoding promising antibody candidates are identified, cloned, and expressed in suitable production systems.

  • Characterization: The expressed antibodies undergo extensive analytical and functional assays to determine binding affinity, specificity, and biological activity .

Unlike traditional mouse-derived antibodies that require humanization to reduce immunogenicity, transgenic mice platforms allow for the direct generation of fully human antibodies, which significantly reduces the potential for immunogenicity when used therapeutically .

What experimental models are appropriate for testing CD27-targeting antibodies?

Several experimental models have been validated for testing CD27-targeting antibodies:

Model TypeApplicationKey Considerations
In vitro cell linesInitial binding and functional testingShould include both CD27+ lymphoma cell lines and primary cells
SCID mouse xenograft modelsAssessing antitumor efficacyParticularly useful with Raji or Daudi tumor cells that express CD27
Cynomolgus monkey modelsToxicity assessmentHigh degree of similarity to human CD27 allows for relevant safety assessment
Human Ig transgenic miceAntibody generation and initial in vivo testingEnables production of fully human antibodies

SCID mice inoculated with human CD27-expressing lymphoma cells (like Raji or Daudi) have been demonstrated to be effective models for assessing the direct antitumor effects of CD27-targeting antibodies . These models provide valuable information about the therapeutic potential of these antibodies before advancing to non-human primate studies and eventual clinical trials.

How can binding specificity of CD27-targeting antibodies be optimized using computational approaches?

Optimizing binding specificity for CD27-targeting antibodies can be achieved through sophisticated computational approaches:

  • Binding Mode Identification: Computational models can identify different binding modes associated with particular ligands or epitopes on the CD27 molecule . This approach involves training biophysics-informed models on experimentally selected antibodies to associate each potential ligand with a distinct binding mode.

  • High-Throughput Sequencing Analysis: Data from phage display experiments can be analyzed using computational tools to disentangle binding modes even when they are associated with chemically similar ligands .

  • Custom Specificity Design: Computational design of antibodies with customized specificity profiles can be achieved by jointly minimizing or maximizing energy functions associated with desired or undesired ligands, respectively . This approach allows researchers to generate:

    • Highly specific antibodies that bind exclusively to CD27

    • Cross-specific antibodies that can recognize multiple related targets

The application of these computational approaches enables the design of antibodies with precisely defined binding characteristics beyond what can be achieved through experimental selection alone . This is particularly valuable when working with targets like CD27 that share structural similarities with other TNF receptor family members.

What mechanisms contribute to the antitumor activity of CD27-targeting antibodies?

CD27-targeting antibodies can exert antitumor effects through multiple mechanisms that should be evaluated during research:

  • Direct Effector Functions: The primary mechanism appears to be antibody-dependent cellular cytotoxicity (ADCC), where NK cells recognize the Fc portion of the antibody bound to CD27 on tumor cells and mediate their destruction .

  • Complement-Dependent Cytotoxicity (CDC): Some CD27-targeting antibodies can activate the complement cascade, leading to formation of the membrane attack complex and tumor cell lysis.

  • T-Cell Costimulation: CD27-targeting antibodies can function as agonists, providing costimulatory signals to T cells, but importantly, this occurs only in combination with T-cell receptor stimulation . This selective activation helps prevent non-specific T-cell activation.

  • Inhibition of Tumor Cell Proliferation: Direct binding of antibodies to CD27 on malignant cells may interfere with pro-survival signaling pathways.

Research has shown that CD27-targeting antibodies like 1F5 significantly enhance the survival of SCID mice bearing Raji or Daudi tumors, likely through these direct effector mechanisms . Importantly, these antibodies do not induce proliferation of primary CD27-expressing tumor cells, which is a critical safety consideration .

How can researchers assess the immunomodulatory effects of CD27-targeting antibodies?

Assessing the immunomodulatory effects of CD27-targeting antibodies requires sophisticated experimental approaches:

  • T-Cell Activation Assays: Measure CD27 antibody effects on T-cell activation markers (CD69, CD137) in combination with TCR stimulation .

  • Cytokine Production Analysis: Quantify changes in cytokine profiles (IL-2, IFN-γ, TNF-α) following treatment with CD27-targeting antibodies.

  • Antigen-Induced Activation Marker (AIM) Assay: This technique can identify antigen-specific T cells based on the co-expression of activation markers such as CD69, OX40, and CD137 following stimulation .

  • Memory T-Cell Response Assessment: Evaluate the impact on memory T-cell populations using surface markers (CD45RA, CCR7, CD27) to distinguish naive, effector, and memory subsets .

The AIM assay methodology involves:

  • Enriching peripheral blood mononuclear cells (PBMCs) for specific cell populations

  • Stimulating cells with peptide pools or antigens of interest

  • Culturing for 24 hours in appropriate media

  • Analyzing activation marker expression through multi-parameter flow cytometry

This comprehensive assessment is critical because CD27-targeting antibodies must balance direct tumor-killing effects with beneficial immunomodulatory properties.

What are the critical quality attributes to evaluate when characterizing CD27-targeting antibodies?

Comprehensive characterization of CD27-targeting antibodies should include assessment of the following critical quality attributes:

  • Binding Properties:

    • Affinity (Kd) measured by surface plasmon resonance or bio-layer interferometry

    • Epitope mapping to determine the exact binding region on CD27

    • Competition with CD70 (natural ligand) binding

    • Cross-reactivity with CD27 from different species (human vs. non-human primate)

  • Functional Activities:

    • T-cell activation potential in combination with TCR stimulation

    • Effects on CD27-expressing tumor cells (proliferation, apoptosis)

    • Fc-mediated effector functions (ADCC, CDC, ADCP)

    • Antibody-dependent cellular phagocytosis (ADCP)

  • Physicochemical Properties:

    • Purity by size-exclusion chromatography

    • Aggregation propensity

    • Thermal stability

    • Charge heterogeneity

The characterization of 1F5 (CDX-1127) showed that it binds with high affinity and specificity to both human and macaque CD27, effectively competes with ligand binding, activates T cells only in combination with TCR stimulation, and does not induce proliferation of primary CD27-expressing tumor cells . These attributes make it a promising candidate for therapeutic development.

How can researchers overcome epitope-masking challenges in CD27 antibody development?

Epitope masking presents a significant challenge in CD27 antibody development that requires specific methodological approaches:

  • Biophysics-Informed Modeling: Utilize computational models that can identify and disentangle multiple binding modes associated with specific epitopes on CD27 . This approach can reveal epitopes that might be masked in conventional screening approaches.

  • Phage Display with Negative Selection: Implement selection strategies that include negative selection steps against closely related proteins or CD27 with masked epitopes to enrich for antibodies binding to specific, accessible epitopes .

  • Structure-Guided Engineering: Use structural information about CD27 and its interactions with ligands to design antibodies that target epitopes that remain accessible in various physiological contexts.

  • Cross-Variant Testing: Test antibody binding against CD27 in different conformational states or from different species to identify broadly reactive antibodies that recognize conserved, accessible epitopes .

These approaches can generate antibodies with customized specificity profiles that overcome epitope-masking challenges, allowing for more effective targeting of CD27 in different cellular contexts and disease states .

What toxicity considerations are important when evaluating CD27-targeting antibodies for clinical development?

When evaluating CD27-targeting antibodies for potential clinical use, several important toxicity considerations must be addressed:

A comprehensive toxicity assessment should include in vitro studies with human PBMCs, dose-ranging studies in relevant animal models, and careful monitoring of immune cell populations, cytokine levels, and clinical pathology parameters.

How can researchers predict and enhance antibody durability for CD27-targeting therapeutics?

Predicting and enhancing antibody durability for CD27-targeting therapeutics involves several research strategies:

  • Somatic Hypermutation (SHM) Analysis: Higher levels of SHM in antibody sequences correlate with greater durability and affinity . Researchers should analyze SHM levels in candidate antibodies and potentially select those with higher mutation rates.

  • Avidity Optimization: Studies have shown that antibody avidity, as measured by EC50 of binding, is significantly negatively correlated with IgH V gene mutations . Designing antibodies with optimal avidity can enhance durability.

  • Sequence Optimization: Identifying "sustainer" sequences—those that maintain high antibody levels over time—can provide templates for engineering more durable antibodies .

  • Immune Recall Considerations: Evidence suggests that prior immune exposure (such as in COVID-19 infection followed by vaccination) generates greater longitudinal antibody stability . This principle could be applied to CD27 antibody development through prime-boost strategies.

  • Fc Engineering: Modifications to the Fc region can significantly impact antibody half-life through altered interactions with the neonatal Fc receptor (FcRn).

Research has shown that antibodies with specific sequence characteristics demonstrate superior cross-variant neutralizing capabilities and durability . These principles can be applied to CD27-targeting antibodies to enhance their therapeutic potential and longevity in clinical applications.

How can researchers address non-specific binding issues with CD27-targeting antibodies?

Non-specific binding is a common challenge in antibody development that can be addressed through several methodological approaches:

  • Computational Specificity Design: Employ biophysics-informed models to design antibodies with customized specificity profiles by optimizing energy functions associated with desired targets while maximizing those associated with undesired targets .

  • Negative Selection Strategies: Implement phage display protocols that include competitive elution or negative selection steps against structurally related proteins to eliminate cross-reactive antibodies .

  • Alanine Scanning Mutagenesis: Systematically replace amino acids in the complementarity-determining regions (CDRs) with alanine to identify residues critical for specific binding versus those contributing to non-specific interactions.

  • Screening Against Tissue Panels: Test candidate antibodies against diverse tissue panels to identify potential cross-reactivity early in development.

  • Optimization of Assay Conditions: Adjust buffer components, blocking agents, and incubation conditions to minimize non-specific interactions during antibody characterization.

For CD27-targeting antibodies specifically, cross-reactivity with other TNF receptor family members should be carefully evaluated due to structural similarities in their extracellular domains. The development of the 1F5 antibody included extensive specificity testing to ensure selective binding to CD27 .

What strategies can improve the reproducibility of CD27 antibody functional assays?

Ensuring reproducibility in CD27 antibody functional assays requires careful attention to several methodological aspects:

  • Standardized Cell Sources:

    • Use well-characterized cell lines with stable CD27 expression

    • For primary cells, implement consistent isolation protocols

    • Consider established cell banks for long-term studies

  • Validated Assay Controls:

    • Include positive controls (known CD27 agonists)

    • Incorporate negative controls (isotype-matched antibodies)

    • Use reference standards across experiments

  • Optimized Assay Conditions:

    • Determine optimal antibody concentrations through dose-response studies

    • Standardize incubation times and temperatures

    • Validate critical reagents from lot to lot

  • Multiparametric Readouts:

    • Implement flow cytometry panels with consistent gating strategies

    • Use multiple activation markers (CD69, OX40, CD137) as in the AIM assay methodology

    • Quantify both early and late activation events

  • Detailed Protocol Documentation:

    • Record all experimental variables

    • Implement laboratory information management systems

    • Ensure consistent training of personnel

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