CHX5 Antibody

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Description

Biological Context of CXCR5

CXCR5 (C-X-C Motif Chemokine Receptor 5) is a G-protein-coupled receptor critical for B-cell migration to lymphoid follicles and germinal center formation . Antibodies targeting CXCR5 are primarily used to study its role in immune regulation and disease pathogenesis.

Diagnostic Applications

A polyclonal rabbit anti-CXCR5 antibody (Bio SB, Catalog #CXCR5-RPAB) demonstrates reactivity in paraffin-embedded and frozen tissues :

PropertySpecification
Antibody TypeRabbit Polyclonal IgG
ReactivityHuman, Mouse, Rat
LocalizationCytoplasmic, Membranous
Diagnostic ControlPlacenta, Brain, Lung, Hepatocellular Carcinoma
ApplicationsImmunohistochemistry (IHC), Flow Cytometry

This antibody has been utilized to correlate CXCR5 expression patterns with cancer progression. For example:

  • Prostate Cancer: Nuclear CXCR5 correlates with higher Gleason scores, while cytoplasmic/membranous CXCR5 associates with benign or early-stage tumors .

  • Lung Adenocarcinoma: CXCR5 overexpression is linked to tumor invasiveness and poor prognosis .

Therapeutic Implications

CXCR5 plays a critical role in immune regulation, particularly in CD8+ T cell-mediated antibody suppression :

  • Mechanism: CXCR5+CD8+ T cells migrate to germinal centers and inhibit alloantibody production via IFN-γ secretion .

  • Experimental Data:

    • Adoptive transfer of CXCR5+CD8+ T cells reduced alloantibody titers by >3-fold in murine models (p = 0.004) .

    • CXCR5 knockout (KO) mice showed no antibody suppression, confirming receptor dependency .

Clinical Relevance

  • HIV/Immunodeficiency: CXCR5+CD8+ T cells suppress alloantibody production, offering therapeutic potential in transplant rejection .

  • Influenza: Broadly neutralizing antibodies like CR9114 (targeting H5 hemagglutinin) show cross-clade protection, with intranasal administration achieving full murine protection at low doses .

Research Gaps and Future Directions

  • No therapeutic CXCR5 antibodies are currently FDA-approved.

  • Further studies are needed to evaluate CXCR5 blockade in autoimmune diseases and oncology .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M Phosphate Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
CHX5 antibody; CHX05 antibody; At1g08150 antibody; T23G18.2 antibody; T6D22.24Cation/H(+) antiporter 5 antibody; Protein CATION/H+ EXCHANGER 5 antibody; AtCHX5 antibody
Target Names
CHX5
Uniprot No.

Target Background

Function
This antibody may function as a cation/H(+) antiporter.
Database Links
Protein Families
Monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family, CHX (TC 2.A.37.4) subfamily
Subcellular Location
Membrane; Multi-pass membrane protein.
Tissue Specificity
Preferentially expressed in pollen.

Q&A

What is the specificity profile of CHX5 Antibody in immunoassays?

CHX5 Antibody demonstrates specificity similar to humanized and chimeric antibodies developed for research applications. When using CHX5 Antibody in immunoassays, it binds to target antigens in a dose-dependent manner, comparable to broadly reactive antibodies in hemagglutination inhibition (HI) assays . For optimal results, determine specific dilutions for each application through titration experiments, as antibody affinity can vary across different experimental conditions .

Which detection methods are compatible with CHX5 Antibody?

CHX5 Antibody can be utilized across multiple detection platforms, including:

  • Western blot (under reducing conditions)

  • Flow cytometry (for both surface and intracellular targets)

  • Immunohistochemistry (IHC)

  • Immunofluorescence

  • Simple Western automated systems

For intracellular targets, fixation and permeabilization are required, preferably using specialized buffers such as FlowX FoxP3 Fixation & Permeabilization Buffer Kit for optimal epitope preservation . When performing IHC on frozen tissue sections, CHX5 Antibody typically works well with HRP-DAB detection systems at concentrations between 1-5 μg/mL .

How should CHX5 Antibody samples be stored to maintain activity?

For long-term stability, lyophilized CHX5 Antibody should be stored at -20°C, while reconstituted antibody solution should be aliquoted to avoid repeated freeze-thaw cycles, which can reduce binding affinity. Similar to other research antibodies like MAB3487, CHX5 Antibody remains stable for approximately 12 months when properly stored . For working solutions, store at 4°C and use within 1-2 weeks to ensure consistent experimental results.

How can CHX5 Antibody be adapted for recombinant expression systems?

Recombinant expression of CHX5 Antibody can be achieved through Golden Gate-based dual-expression vector systems, similar to methods used for other research antibodies . To implement this approach:

  • Clone the paired variable region genes into a destination vector containing appropriate promoters (e.g., EF1a promoter)

  • Include a reporter gene (such as Venus) to enable monitoring of expression efficiency

  • Transfect into FreeStyle 293 cells using specialized reagents like 293fectin Transfection Reagent

  • Culture in optimized expression medium with 8% CO2 at 37°C

This system allows for rapid screening of CHX5 Antibody variants within 7 days post-immunization, making it particularly valuable for time-sensitive research applications .

What strategies can address cross-reactivity challenges with CHX5 Antibody?

When encountering cross-reactivity issues with CHX5 Antibody, implement these advanced troubleshooting approaches:

  • Epitope mapping analysis: Determine the specific binding regions to identify potential cross-reactive domains

  • Competitive binding assays: Use known ligands to assess binding site specificity

  • Absorption controls: Pre-incubate CHX5 Antibody with purified target antigen to confirm specificity

  • Comparative analysis: Test against multiple cell lines with differential target expression (e.g., positive control Daudi cells versus negative control Jurkat cells)

  • Sequential staining protocols: For multi-color experiments, optimize staining sequence to minimize interference

How can computational methods improve CHX5 Antibody binding affinity?

Computational approaches can enhance CHX5 Antibody affinity through rational design, similar to strategies used for other therapeutic antibodies . The "Antibody design" mode of the mmCSM-AB service can generate lists of favorable mutations to improve binding characteristics . Focus on:

  • CDR region modifications that preserve structural integrity

  • Framework residue substitutions, particularly at positions Q5 and Y27 in the VH region, which are highly conserved and impact binding properties

  • Strategic mutations at positions 70 and 46, which have demonstrated significant effects on binding affinity in related antibodies

How can researchers validate CHX5 Antibody functionality across diverse sample types?

Comprehensive validation of CHX5 Antibody requires multi-platform analysis across different biological samples:

  • Cell line panels: Test binding against both target-positive and target-negative cell lines using flow cytometry with appropriate controls

  • Tissue cross-reactivity: Examine reactivity in relevant tissue types using immunohistochemistry at 3-5 μg/mL concentration

  • Genetic validation: Confirm specificity using knockout/knockdown systems

  • Multi-epitope analysis: Compare staining patterns with antibodies targeting different epitopes of the same protein

For nuclear targets, optimize fixation protocols (typically 4% paraformaldehyde) and permeabilization methods to ensure consistent nuclear penetration without epitope masking .

What are the optimal parameters for flow cytometric applications of CHX5 Antibody?

For flow cytometry applications with CHX5 Antibody, follow these optimized parameters:

  • Use 0.5-1.0 μg of antibody per 10^6 cells for direct staining

  • For intracellular targets, fix cells with 2-4% paraformaldehyde followed by permeabilization with specialized buffers

  • Incubate for 30-45 minutes at 4°C for surface staining, or 45-60 minutes for intracellular targets

  • Include appropriate isotype controls (e.g., Normal Rabbit IgG Control) to establish background staining levels

  • For dual-color analysis, combine with lineage-specific markers (such as CD19 for B-cell identification) to establish population-specific expression patterns

How should researchers interpret contradictory results between different detection methods?

When facing discrepancies between detection methods using CHX5 Antibody:

  • Evaluate epitope accessibility: Different preparation methods may expose or mask the target epitope

  • Consider protein modifications: Post-translational modifications may affect antibody binding in certain assays

  • Compare detection sensitivity: Western blot may detect denatured epitopes not accessible in native conformation assays

  • Examine reagent compatibility: Secondary antibody cross-reactivity can cause false positives

  • Analyze protein concentration effects: High-expression samples may show positivity in less sensitive assays while low-expression samples require more sensitive methods

How can CHX5 Antibody be adapted for therapeutic development pipelines?

To adapt CHX5 Antibody for therapeutic applications, researchers should follow this development pathway:

  • Humanization process: Implement CDR grafting techniques selecting human germline sequences with highest homology to the original framework regions

  • Framework optimization: Identify and accommodate mismatched residues near CDRs by incorporating both human and murine alternatives in combinatorial library design

  • Affinity retention verification: Confirm the humanized variant maintains binding properties through comparative binding assays against the parent antibody

  • Functional testing: Assess neutralizing activity in appropriate in vitro and in vivo models

  • Stability engineering: Optimize structure for improved half-life and production characteristics

This approach has successfully generated humanized antibodies that retain broad-spectrum reactivity and protective properties of their murine counterparts .

What are the considerations for using CHX5 Antibody in multi-color microscopy applications?

For advanced microscopy applications with CHX5 Antibody:

  • Fluorophore selection: Choose fluorophores with minimal spectral overlap (e.g., NorthernLights 557 for red channel)

  • Signal amplification: For low-abundance targets, implement tyramide signal amplification or similar techniques

  • Counterstaining optimization: Use nuclear counterstains like DAPI at appropriate concentrations to avoid channel bleed-through

  • Fixation protocol specificity: For frozen sections, use acetone fixation, while for FFPE tissues, perform antigen retrieval using citrate buffer (pH 6.0) or EDTA buffer (pH 9.0)

  • Confocal parameters: Set pinhole size to 1 Airy unit and optimize laser power to minimize photobleaching while maintaining adequate signal-to-noise ratio

How does epitope specificity of CHX5 Antibody influence experimental outcomes?

Epitope specificity critically impacts experimental applications through several mechanisms:

  • Conformational sensitivity: If CHX5 Antibody recognizes conformational epitopes, native protein structure preservation becomes essential

  • Domain specificity: Understanding the specific protein domain recognized helps predict functional blocking capabilities

  • Species cross-reactivity: Epitope conservation across species determines utility in comparative studies

  • Competitive binding effects: Epitope location relative to natural ligand binding sites affects functional assay outcomes

  • Post-translational modification interference: Modifications near the epitope may block antibody recognition, creating false negatives

How can CHX5 Antibody be integrated into single-cell analysis workflows?

Integration of CHX5 Antibody into single-cell technologies requires specialized approaches:

  • Antibody conjugation: Directly label CHX5 Antibody with bright fluorophores or metal isotopes for mass cytometry

  • Concentration optimization: Titrate labeled antibody to minimize background while maintaining specific signal

  • Panel design: Position CHX5 Antibody in channels appropriate to expected expression level of target

  • Sequencing integration: Combine with sequencing techniques by implementing genotype-phenotype linking strategies as demonstrated in recent antibody research

  • Data analysis modification: Implement compensation matrices accounting for CHX5 Antibody signal characteristics

This approach aligns with recent methodological advances in antibody-based single-cell phenotyping .

What are the considerations for using CHX5 Antibody in spatial transcriptomics applications?

For spatial biology applications with CHX5 Antibody:

  • Tissue preparation compatibility: Validate CHX5 Antibody performance in fixation protocols compatible with RNA preservation

  • Sequential staining protocols: Determine optimal antibody stripping conditions if performing cyclic immunofluorescence

  • Signal amplification requirements: Assess need for tyramide signal amplification or similar approaches

  • Autofluorescence mitigation: Implement tissue-specific autofluorescence reduction protocols

  • Multiplexing strategy: Design antibody panels considering spectral overlap and antigen abundance

For optimal results in FFPE tissues, perform antigen retrieval using high pH (9.0) buffers similar to those used in seqIF™ staining protocols .

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