CKX2 Antibody

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Description

Definition and Biological Role of CDX2

CDX2 is a homeobox gene encoding a nuclear transcription factor critical for intestinal embryonic development and maintenance of intestinal epithelial differentiation . It is expressed in nuclei of epithelial cells from the duodenum to the rectum and serves as a lineage-survival oncogene in colorectal cancers .

Clinical and Diagnostic Applications

CDX2 antibodies are widely used to identify intestinal differentiation in tumors and distinguish primary colorectal adenocarcinomas from metastases .

Performance Metrics:

ApplicationSensitivitySpecificityKey Findings
Colorectal Cancer96.6%93%Uniform nuclear staining in 76–100% of tumor cells .
Gastric Cancer61%77%Focal staining in intestinal-type tumors .
Ovarian Cancer64%N/AExpressed in mucinous subtypes but absent in serous/endometrioid tumors .
Pancreatic Cancer16%96.7%Rare focal positivity; CK7-/CK20+ phenotype more specific .

Technical Considerations for CDX2 Antibodies

Commercial CDX2 antibodies exhibit significant variability in performance depending on clone and protocol .

Comparison of Common Clones:

CloneVendorApplicationsReactivityOptimal DilutionKey Limitations
EPR2764YAbcamIHC, WB, IFHuman, Mouse, Rat1:100–1:1000Cross-reactivity in 26% urothelial cancers .
CDX2-88Biocare MedicalIHCHumanReady-to-useLower sensitivity in low-expressor tumors .
AMT28R&D SystemsIHC, ICCHuman8 µg/mLHeterogeneous staining in gastric cancers .
5B4C1Creative BiolabsELISA, FCMHumanCustomizedLimited validation in FFPE tissues .

A. Circulating Tumor Cells (CTCs)

  • CDX2-positive CTCs were detected in 81% of colorectal cancer (CRC) patients (median = 21.5 CTCs/10 mL blood) and correlated with advanced TNM stage and poorer survival .

  • Specificity: 92.5% (vs. non-CRC cohorts) .

B. Comparative Biomarker Studies

  • CK7-/CK20+ phenotype: Specificity = 96.7% for CRC vs. CDX2’s 93% .

  • Villin: CDX2 shows superior sensitivity (96.6% vs. 78%) but comparable specificity .

C. Limitations and Pitfalls

  1. Antibody Dependency:

    • Staining intensity and specificity vary significantly across clones (e.g., EPR2764Y detects CDX2 in 26% of urothelial carcinomas) .

  2. Non-Intestinal Expression:

    • Mucinous ovarian carcinomas: 64% positive .

    • Urinary bladder adenocarcinomas: 100% positive .

Protocol Optimization Guidelines

  • Antigen Retrieval: Tris-EDTA buffer (pH 9.0) at 100°C for 32 minutes enhances nuclear staining .

  • Automated Platforms: Ventana DISCOVERY ULTRA with OptiView DAB is recommended for consistent IHC results .

  • Controls: Normal colonic mucosa (positive); skeletal muscle or brain tissue (negative) .

Emerging Research Directions

  • CR-CSC Differentiation: BMP7v treatment upregulates CDX2 in colorectal cancer stem cells, suggesting therapeutic targeting potential .

  • ChIP-Seq Applications: CDX2 antibody (ab76541) has been validated for chromatin profiling in Caco-2 cells .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
CKX2 antibody; At2g19500 antibody; F3P11.10Cytokinin dehydrogenase 2 antibody; EC 1.5.99.12 antibody; Cytokinin oxidase 2 antibody; AtCKX2 antibody; CKO 2 antibody
Target Names
CKX2
Uniprot No.

Target Background

Function
CKX2 antibody catalyzes the oxidation of cytokinins. Cytokinins are a family of N(6)-substituted adenine derivatives that function as plant hormones. The substituent in these derivatives is an isopentenyl group.
Gene References Into Functions
  1. CKX2 expression is directly activated by the IKU transcription factor WRKY10. This activation promotes endosperm growth. PMID: 24003120
Database Links

KEGG: ath:AT2G19500

STRING: 3702.AT2G19500.1

UniGene: At.13346

Protein Families
Oxygen-dependent FAD-linked oxidoreductase family
Subcellular Location
Endoplasmic reticulum. Secreted, extracellular space.
Tissue Specificity
Expressed in the shoot apex, in stipules, and occasionally in the most apical part of the inflorescence stems. Not detected in roots.

Q&A

What is CDX2 and what is its significance as a research marker?

CDX2 is a homeobox transcription factor that plays crucial roles in intestinal differentiation and development. In research settings, CDX2 antibody is widely utilized as an immunohistochemical marker for intestinal differentiation in neoplasms. The protein has a molecular weight of approximately 38 kDa and is primarily expressed in the nuclei of intestinal epithelial cells . CDX2 has significant value in differential diagnosis of adenocarcinomas, particularly when determining the primary site of metastatic tumors of unknown origin. The importance of CDX2 extends to its role in regulating Hox gene expression, making it relevant in both developmental biology and cancer research .

What are the standard applications for CDX2 antibody in experimental protocols?

CDX2 antibody is predominantly used in immunohistochemical analyses, but it has multiple experimental applications that researchers should consider:

ApplicationTypical DilutionKey Considerations
Western Blotting1:1000Best for quantitative analysis of expression levels
Immunoprecipitation1:100Useful for studying protein interactions
ImmunohistochemistryVaries by clonePrimary application for tissue localization

When designing experiments, it's critical to validate the antibody's specificity for your application. For Western blotting, the expected molecular weight of 38 kDa serves as confirmation of specificity . For immunohistochemistry, appropriate positive and negative controls are essential to validate staining patterns.

How do I interpret CDX2 immunohistochemical staining patterns correctly?

When evaluating CDX2 immunostaining, only nuclear staining should be considered positive. Cytoplasmic positivity is occasionally encountered but should be considered an artifact . The percentage of positive cells is typically scored in a semiquantitative method according to the following scheme:

  • 0: less than 5% of tumor cells

  • 1+: positive signal in 5-25% of tumor cells

  • 2+: 26-50% of tumor cells

  • 3+: 51-75% of tumor cells

  • 4+: greater than 75% of tumor cells

Staining in less than 50% of tumor cells is considered focal, while staining in more than 50% is considered diffuse positivity . In colorectal adenocarcinomas, the majority of cases (81%) typically demonstrate strong and diffuse immunostaining in more than 50% of cells .

How does antibody clone selection impact CDX2 detection sensitivity and specificity?

Clone selection is a critical factor affecting CDX2 staining results. According to comparative studies, significant performance differences exist between available clones. Five commonly used clones have been evaluated extensively:

  • EPR2764Y (concentrated)

  • EPR2764Y (ready-to-use format)

  • DAK-CDX2

  • AMT28

  • CDX2-88

For high-expressor tumors (H-score 150-300), the mean H-scores with these antibodies were 262, 236, 234, 167, and 149, respectively, with detection rates of 100%, 100%, 100%, 98%, and 93% . For low-expressor tumors (H-score 10-149), the mean H-scores were 59, 26, 28, 7, and 5, with detection rates of 98%, 58%, 64%, 18%, and 14% .

These findings indicate that EPR2764Y in concentrated form demonstrates superior sensitivity, particularly for tumors with low CDX2 expression levels. This makes antibody selection particularly important when studying tissues with potentially low or variable CDX2 expression .

What is the comparative diagnostic value of CDX2 versus CK7/CK20 immunophenotyping?

When evaluating adenocarcinomas of uncertain origin, researchers often face the challenge of choosing between CDX2 and cytokeratin phenotyping. The evidence indicates:

  • The CK7-/CK20+ phenotype shows a specificity of 96.7% in predicting colorectal adenocarcinomas, which is superior to CDX2 expression .

  • CDX2 expression demonstrates higher sensitivity than CK phenotyping:

    • 96.6% sensitivity at >5% cutoff

    • 78% sensitivity at >50% cutoff

  • Expression patterns across different adenocarcinomas:

    • Colorectal: 97% CDX2-positive

    • Gastric: 61% CDX2-positive

    • Pancreatic: 16% CDX2-positive

This data suggests that while CK7-/CK20+ phenotype offers superior specificity and positive predictive value, CDX2 provides higher sensitivity. The optimal approach may involve using both marker systems in complementary fashion, particularly in diagnostically challenging cases .

How can researchers address cross-reactivity and non-specific CDX2 staining in non-intestinal tissues?

Cross-reactivity with non-intestinal tissues presents a significant challenge for CDX2 antibody applications. Studies have demonstrated CDX2 reactivity in:

  • 26% of urothelial carcinomas

  • 11% of lung adenocarcinomas

  • 17% of large cell/sarcomatoid lung carcinomas

  • 21% of esophageal squamous cell carcinomas

To address this challenge, researchers should:

  • Implement rigorous background controls and antibody validation

  • Consider using in-house optimized protocols, which consistently yield better staining results than vendor-recommended protocols

  • Employ quantitative scoring systems like the H-score method to differentiate between true positive and non-specific staining

  • Use multiple marker panels (incorporating CK7/CK20) rather than relying solely on CDX2

  • Consider clone-specific cross-reactivity profiles when selecting antibodies for specific tissue types

What is the optimal tissue processing protocol for CDX2 immunohistochemistry?

Successful CDX2 immunohistochemistry requires careful attention to tissue processing:

  • Fixation: Standard 10% neutral buffered formalin fixation for 24-48 hours is recommended. Overfixation can mask epitopes and reduce staining intensity.

  • Antigen Retrieval: Heat-induced epitope retrieval using citrate buffer (pH 6.0) or EDTA buffer (pH 9.0) is typically required. Optimization of retrieval conditions is critical, as insufficient retrieval is a common cause of false-negative results.

  • Background Reduction: Use of appropriate blocking reagents to minimize non-specific binding is essential, particularly when evaluating tissues with high endogenous biotin or peroxidase activity.

  • Detection Systems: High-sensitivity detection systems are recommended, particularly for evaluating tissues with potentially low CDX2 expression. Polymer-based detection systems often provide optimal results with minimal background.

  • Controls: Incorporation of known positive (colorectal epithelium) and negative (lymphoid tissue) controls in each staining run is essential for quality assurance .

How can researchers quantitatively assess CDX2 expression levels?

For rigorous quantitative assessment of CDX2 expression, researchers should consider these methodological approaches:

  • H-score Method: This semi-quantitative approach combines intensity and percentage of positive cells. The formula is:
    H-score = (1 × % of weakly stained cells) + (2 × % of moderately stained cells) + (3 × % of strongly stained cells)

    Resulting in a score range of 0-300 .

  • Categorical Scoring:

    • High expressors: H-score of 150-300

    • Low expressors: H-score of 10-149

    • Negative: H-score <10

  • Digital Image Analysis: Computer-assisted quantification can provide more objective assessment of nuclear staining intensity and percentage. This approach reduces inter-observer variability and enhances reproducibility.

  • Multiplex Approaches: Combining CDX2 with other markers in multiplex immunohistochemistry or immunofluorescence can provide contextual information about co-expression patterns.

Why might CDX2 immunohistochemistry yield inconsistent results across laboratories?

The variability in CDX2 staining results across different laboratories has been well-documented, with quality control assessments showing that only 45% of laboratories participating in proficiency testing produced sufficient CDX2 staining . This inconsistency can be attributed to several factors:

  • Antibody Clone Selection: Performance varies significantly between clones, with EPR2764Y concentrated format showing superior results for both high and low expressors compared to other clones .

  • Protocol Standardization: In-house optimized protocols consistently outperform vendor-recommended protocols, suggesting that laboratory-specific optimization is critical .

  • Antigen Retrieval Variations: Differences in heat-induced epitope retrieval methods, buffer composition, pH, and duration significantly impact staining quality.

  • Detection System Sensitivity: The choice of detection system affects the ability to visualize low-level expression.

  • Scoring Interpretation: Variation in what is considered "positive" staining (nuclear only vs. including cytoplasmic staining) contributes to inconsistent reporting.

How can researchers differentiate between true positive CDX2 staining and artifact staining?

Distinguishing true positive CDX2 staining from artifacts requires systematic evaluation:

  • Staining Localization: Only nuclear staining should be considered positive for CDX2. Cytoplasmic positivity is infrequently encountered and should be considered an artifact .

  • Pattern Consistency: True positive staining typically shows consistent patterns within similar cell populations, while artifactual staining often appears random or associated with tissue edges or folds.

  • Negative Controls: Examination of negative control slides (primary antibody omitted) can help identify non-specific binding of detection reagents.

  • Serial Sections: Comparison of staining patterns across serial sections can help confirm reproducibility of observed patterns.

  • Correlation with Morphology: True positive staining should correlate with expected biological patterns based on tissue morphology and differentiation.

What is the relationship between CDX2 expression and HOX gene regulation in cancer research?

CDX2's role in HOX gene regulation has significant implications for cancer research:

  • CDX2 has a demonstrated role in regulating Hox gene expression, positioning it as an important transcriptional regulator in normal development and pathological conditions .

  • In neoplastic contexts, CDX2 is implicated in the aberrant expression of Hox genes observed in human acute myeloid leukemia (AML) cell lines .

  • The relationship between CDX2, HOX genes, and cancer progression provides potential therapeutic targets and biomarkers for various malignancies.

  • Research methodologies to investigate this relationship typically involve:

    • ChIP-seq approaches to identify CDX2 binding sites in HOX gene regulatory regions

    • Transcriptional analyses following CDX2 knockdown or overexpression

    • Correlation studies between CDX2 and HOX gene expression patterns in cancer tissues

How is CDX2 expression correlated with intestinal metaplasia and progression to neoplasia?

CDX2 serves as a key marker in understanding the progression from metaplasia to neoplasia:

  • In gastric carcinomas, CDX2 expression is more common in intestinal-type tumors (77%) than in diffuse-type carcinomas (45%) , suggesting its association with intestinal differentiation patterns.

  • The presence of CDX2 in metaplastic tissues may indicate an early shift toward intestinal differentiation, potentially preceding morphological changes.

  • Methodological approaches to study this progression include:

    • Longitudinal studies of premalignant lesions with CDX2 immunoprofiling

    • Correlation of CDX2 expression patterns with other markers of intestinal differentiation

    • Integration of CDX2 status with molecular alterations characteristic of neoplastic progression

  • Experimental designs should account for heterogeneity of expression, as focal CDX2 positivity may have different biological implications than diffuse expression.

  • Combined analysis with markers like CK7 and CK20 provides a more comprehensive assessment of metaplastic changes and their potential significance in neoplastic transformation.

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