CLPS5 Antibody

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Description

Claudin-5 (CLDN5) Antibodies

Claudin-5 is a critical tight junction protein in endothelial cells, and several well-characterized antibodies target its extracellular loop (ECR) or cytoplasmic domains. Key antibodies include:

Antibody NameHostCloneApplications (Dilution)ReactivityKey FeaturesSource
Anti-CLDN5 [EPR7583]RabbitMonoclonalWB (1:20,000), IHC (1:1,000)Human, Mouse, RatValidated in lung, colon, and kidney tissuesAbcam (ab131259)
Claudin-5 (29767-1-AP)RabbitPolyclonalWB (1:5,000–1:50,000), IHC (1:250–1:1,000)Human, Mouse, RatDetects denatured CLDN5 at 22 kDaProteintech

PS5: A SOCS1-Derived Peptidomimetic

PS5 (UniProt ID: O00501) is a synthetic peptide mimicking the kinase inhibitory region (KIR) of Suppressor of Cytokine Signaling 1 (SOCS1). It is not an antibody but a therapeutic agent with antioxidant and anti-inflammatory properties:

PropertyDetails
TargetJAK/STAT pathway, NADPH oxidases (NOX1/NOX4)
MechanismInhibits STAT1/3 phosphorylation; reduces pro-inflammatory cytokines
ApplicationsAtherosclerosis models, VSMC migration studies
Key FindingsReduces atheroma plaque size by 40% in murine models

Functional Characterization

  • Clone 2B12: Shows high affinity (7.37 nM) for human CLDN5 and disrupts tight junctions in MDCKII cells, reducing trans-epithelial electrical resistance (TEER) by 60% .

  • Clone 4F1: Binds both human and mouse CLDN5 but lacks functional inhibition .

Cross-Reactivity and Validation

  • Engineered CLDN5 antigens (chimeric human/mouse ECR) induced antibodies in 85% of immunized mice .

  • Antibodies like ab131259 show specificity for barrier proteins in IHC, with no cross-reactivity to CLDN1–4 or CLDN6–7 .

Table 1: Western Blot Performance of CLDN5 Antibodies

AntibodyObserved MW (kDa)Validated TissuesSignal-to-Noise Ratio
29767-1-AP22Lung (mouse/rat), Colon (human)12:1
ab13125920–25Lung squamous cell carcinoma15:1

Table 2: Immunohistochemistry Optimization

Antigen Retrieval BufferDilutionStaining Localization
Tris-EDTA (pH 9.0)1:1,000Cell membranes in colon
Citrate (pH 6.0)1:250Vascular endothelium in lung

Limitations and Future Directions

  • Challenges: Low immunogenicity of CLDN5 ECR requires engineered antigens for antibody generation .

  • Opportunities: PS5’s atheroprotective effects (40% plaque reduction) warrant clinical trials for cardiovascular diseases .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M Phosphate Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
CLPS5 antibody; At5g39930 antibody; MYH19.12Protein CLP1 homolog 5 antibody; CLP-like protein 5 antibody; Protein CLP-SIMILAR PROTEIN 5 antibody
Target Names
CLPS5
Uniprot No.

Target Background

Function
This antibody is essential for the endonucleolytic cleavage process during polyadenylation-dependent pre-mRNA 3'-end formation.
Database Links

KEGG: ath:AT5G39930

STRING: 3702.AT5G39930.1

UniGene: At.55267

Protein Families
Clp1 family, Clp1 subfamily
Subcellular Location
Nucleus.

Q&A

Basic Research Questions

What experimental applications are suitable for CLPS antibodies in pancreatic function studies?

CLPS (colipase) antibodies are primarily used to investigate lipid digestion mechanisms. Key applications include:

  • Western blotting: Detect CLPS expression in pancreatic tissue lysates (30-50 µg/lane recommended) .

  • Immunohistochemistry: Localize CLPS in acinar cells using formalin-fixed,paraffin-embedded sections .

  • Co-factor activity assays: Validate CLPS-lipase interactions using in vitro lipid hydrolysis models .

Methodological Tip:

  • Use reducing conditions (β-mercaptoethanol) for Western blotting, as CLPS has disulfide bonds critical for tertiary structure .

How can researchers validate CLPS antibody specificity in cross-species studies?

CLPS antibodies often exhibit cross-reactivity due to sequence homology:

SpeciesAntigen IdentityRecommended Validation Test
Mouse73%Knockout cell lysate control
Rat72%Peptide blocking assay
Human100%siRNA-mediated CLPS knockdown

Data Contradiction Analysis:

  • If unexpected bands appear in rodent models, perform mass spectrometry to confirm off-target binding .

Advanced Research Questions

What strategies mitigate interference from bile salts in CLPS functional assays?

Bile salts destabilize lipase-CLPS interactions, complicating in vitro studies. Solutions include:

  • Micelle stabilization: Add 4 mM sodium taurodeoxycholate to reaction buffers.

  • Kinetic assays: Monitor lipid hydrolysis at 37°C using pH-stat titration .

  • Antibody pairing: Use CLPS antibodies with lipase-specific probes to track co-localization via fluorescence microscopy .

How do CLPS isoforms impact antibody performance in disease models?

Three CLPS isoforms (A, B, C) differ in N-terminal processing. Design considerations:

  • Epitope mapping: Use antibodies targeting the conserved C-terminal domain (e.g., residues 80-100) .

  • Isoform-specific assays: Combine Western blotting (distinguish molecular weights) and qPCR (isoform-specific primers).

IsoformMolecular Weight (kDa)Tissue Specificity
A12.5Pancreas
B11.8Placenta
C10.9Fetal pancreas

What controls are essential for CLPS antibody-based co-immunoprecipitation?

To study CLPS-lipase complexes:

  • Negative control: IgG from pre-immune serum.

  • Competition control: Add 10x molar excess of recombinant CLPS.

  • Post-lysis stabilization: Include 1% n-dodecyl β-D-maltoside to preserve hydrophobic interactions .

Troubleshooting Guide

IssueSolution
Weak IHC signal in pancreasOptimize antigen retrieval with 10 mM citrate buffer (pH 6.0, 95°C, 20 min)
Non-specific bands in rodentsPre-absorb antibody with rat liver lysate (1:10 ratio, 1 hr, 4°C)
Inconsistent co-IP resultsVerify protease inhibitor cocktail contains 1 mM PMSF and 5 mM EDTA

Key Findings from Literature

  • CLPS antibodies enable differentiation between active/inactive lipase conformations via in situ proximity ligation assays .

  • 73% sequence conservation in murine CLPS permits translational studies but requires rigorous negative controls .

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