CML7 Antibody

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Description

Introduction to CML and the 6C7 Antibody

CML (Nε-carboxymethyl lysine) is a stable AGE formed via oxidative stress or glycation reactions. It serves as a biomarker for AGE accumulation in diseases like diabetes, Alzheimer’s, and chronic kidney disease . The 6C7 monoclonal antibody (mAb), developed by Helen Vlassara’s lab, specifically targets CML-modified proteins and lipids .

Role in Disease Pathogenesis

  • CML accumulation correlates with diabetic complications and neurodegenerative diseases. The 6C7 antibody enables quantification of CML in tissues and biological fluids, aiding in clinical research .

  • Competitive ELISA studies confirm its specificity for CML over unmodified lysine or glycated proteins .

Food Science

  • Widely used to measure AGEs in thermally processed foods, linking dietary CML to chronic inflammation and metabolic disorders .

Comparative Studies

  • Other anti-CML antibodies (e.g., clone 2D6G2) show similar specificity but differ in affinity and cross-reactivity profiles .

Mechanistic Insights

  • Epitope Recognition: The 6C7 antibody binds to the carboxymethyl side chain of lysine residues without cross-reacting with native proteins .

  • Functional Utility: Neutralizes CML-mediated pro-inflammatory signaling in vitro, supporting its therapeutic potential .

Ongoing Research Directions

  • Investigating 6C7’s utility in blocking AGE-receptor (RAGE) interactions to mitigate inflammation .

  • Development of CML-targeted therapeutics, including antibody-drug conjugates (ADCs), leveraging platforms like those used for CD123 or IL1RAP in leukemia .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M Phosphate Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
CML7 antibody; At1g05990 antibody; T21E18.4Calmodulin-like protein 7 antibody
Target Names
CML7
Uniprot No.

Target Background

Function
This antibody has potential as a calcium sensor.
Database Links

KEGG: ath:AT1G05990

STRING: 3702.AT1G05990.1

UniGene: At.15459

Protein Families
Calmodulin family

Q&A

What is carboxymethyllysine (CML) and why are antibodies against it important?

Carboxymethyllysine (CML), also known as N(epsilon)-(carboxymethyl) lysine, is a predominant Advanced Glycation End Product (AGE) formed when proteins and lipids undergo oxidative stress and chemical glycation processes. CML represents a crucial biomarker in numerous pathological conditions, making antibodies against it valuable research tools. These antibodies enable detection and quantification of CML in biological samples from patients with conditions like chronic kidney disease (CKD), diabetes, and Alzheimer's disease, where AGE accumulation plays a significant role in disease progression . The importance of CML antibodies extends beyond clinical applications to food analysis, where CML serves as the most widely used marker for AGEs in processed foods .

What are the main types of CML antibodies available for research?

Research applications primarily utilize two categories of CML antibodies:

  • Polyclonal antibodies: These heterogeneous antibody populations recognize multiple epitopes on the CML molecule and are typically generated in rabbits or larger mammals by immunizing with CML-modified carrier proteins. They offer broad epitope recognition but may exhibit batch-to-batch variability.

  • Monoclonal antibodies: These homogeneous antibody populations recognize a single epitope and are produced through hybridoma technology or newer approaches. Examples include mAb 2D6G2 and AGE-CML [6C7], which demonstrate high specificity for the CML structural domain across different carrier proteins .

Both antibody types undergo validation to confirm their specificity for the CML domain rather than the carrier protein used for immunization. Monoclonal antibodies generally offer advantages in experimental reproducibility and specificity but may have reduced sensitivity compared to polyclonal antibodies due to their single-epitope recognition .

How are CML antibodies typically generated?

CML antibodies are generated through several methodological approaches:

Traditional methods:

  • Hybridoma technology: This involves immunizing mice with CML-modified carrier proteins (such as KLH, BSA, or HSA), monitoring serum antibody titers, extracting B cells from the spleen of hyperimmunized animals, and fusing them with immortal myeloma cells. The resulting hybridomas undergo single-cell cloning (typically by limiting dilution) to establish stable monoclonal antibody-producing cell lines .

Modern approaches:

  • Single B cell screening technologies: These accelerate monoclonal antibody discovery by bypassing traditional hybridoma generation. The process involves B cell isolation, cell lysis, sequencing of antibody heavy and light chain variable regions, and cloning these into mammalian expression systems .

  • Phage display: This in vitro selection technique allows screening of large antibody libraries without animal immunization .

For CML antibodies specifically, the immunogen preparation is critical - carrier proteins must be carefully modified to present the CML epitope while maintaining the correct structural conformation .

What detection methods can be used with CML antibodies, and how do they compare?

CML antibodies can be employed in several detection platforms with varying sensitivity and specificity profiles:

Detection MethodTypical DilutionSensitivityApplicationsAdvantagesLimitations
ELISA (Direct)1:6000-1:100000.4 ng/dLQuantification in serum/fluidsHigh throughput, quantitativeLimited spatial information
ELISA (Competitive)0.1 μg/mL0.4 ng/dLClinical samples analysisSuperior for complex matricesRequires optimization
Western Blot1:5000-8000ModerateProtein size discriminationSize information of modified proteinsSemi-quantitative
Immunohistochemistry1:50-100VariableTissue localizationSpatial distribution informationQualitative, fixation sensitive

The competitive ELISA format has proven particularly valuable for clinical applications, allowing quantification of CML in patient samples even in the presence of potentially interfering substances. The detection limit of 0.4 ng/dL (equivalent to 5% inhibition in competitive assays) enables sensitive measurement of CML concentrations corresponding to advanced stages of chronic kidney disease .

When selecting a method, researchers should consider whether quantification, localization, or protein size information is the primary experimental goal .

How should CML antibodies be validated for experimental use?

Proper validation of CML antibodies requires a multi-step approach to ensure specificity and functionality:

  • Cross-reactivity assessment: Test antibody binding against both CML-modified and native (unmodified) carrier proteins. High-quality CML antibodies should demonstrate strong reactivity with CML epitopes regardless of the carrier protein, while showing minimal recognition of unmodified proteins .

  • Dose-dependency confirmation: Perform dose-response experiments to verify that antibody binding increases proportionally with increasing CML-protein concentrations, confirming specific antigen recognition .

  • Isotype and sequence characterization: Determine antibody isotype and sequence variable domains to enable reproducible production and potential recombinant expression .

  • Application-specific validation: For each intended application (ELISA, Western blot, IHC), perform specific controls including:

    • Positive controls using known CML-containing samples

    • Negative controls using samples from AGE-free or AGE-depleted sources

    • Competitive inhibition tests using soluble CML-modified proteins

  • Standard curve establishment: For quantitative applications, develop standard curves using purified CML-modified proteins of known concentration .

Validation experiments should include demonstrating that antibody recognition is specific to the CML structural pattern rather than to the carrier protein used for immunization or antibody production .

What are the optimal storage and handling conditions for CML antibodies?

To maintain CML antibody functionality and prevent degradation:

Storage recommendations:

  • Store at -20°C for long-term preservation

  • Avoid repeated freeze-thaw cycles by preparing single-use aliquots

  • For working solutions, store at 4°C for up to 2 weeks

Buffer conditions:

  • Typical storage buffers contain 0.1M sodium phosphate, pH 7.4, with 0.15M NaCl

  • Include preservatives like 0.05% (w/v) sodium azide to prevent microbial growth

  • For applications sensitive to sodium azide (such as HRP-based detection), use azide-free formulations

Handling precautions:

  • Transport with cold packs

  • Avoid excessive agitation that may lead to aggregation

  • Monitor antibody concentration and functionality periodically if stored for extended periods

Following these guidelines ensures maintained specificity and sensitivity in experimental applications, particularly for quantitative assays where antibody performance directly impacts data reliability .

How can CML antibodies be used to study disease progression in chronic kidney disease?

CML antibodies provide valuable tools for investigating the role of AGEs in chronic kidney disease progression through several methodological approaches:

  • Serum biomarker quantification: Competitive ELISA using anti-CML antibodies allows precise measurement of circulating CML levels in CKD patients. Research has demonstrated that CML concentrations correlate with disease severity, with advanced CKD stages showing approximately 12 ng/dL CML-HSA (corresponding to 20% inhibition in competitive assays) .

  • Kidney tissue AGE accumulation: Immunohistochemistry with CML antibodies enables visualization of AGE deposition patterns within renal structures, revealing how these modifications affect specific nephron segments during disease progression .

  • Intervention efficacy assessment: CML antibodies can measure changes in AGE levels following therapeutic interventions, providing objective markers of treatment efficacy.

  • Longitudinal monitoring: Serial measurements using standardized CML immunoassays allow tracking of AGE accumulation over time in individual patients, potentially identifying accelerated glycoxidation before clinical manifestations.

For research validity, investigators should establish reference ranges using standardized assay conditions, as no internationally recognized standard unit of measurement exists for AGE quantification. This challenge makes comparisons between different laboratories difficult without proper controls and standardization .

What approaches address cross-reactivity concerns when using CML antibodies?

Cross-reactivity represents a significant challenge when working with CML antibodies. Researchers can implement several methodological strategies to mitigate these concerns:

Addressing cross-reactivity is particularly important when studying complex biological samples where multiple AGE species coexist and may share structural similarities with CML .

How can CML antibodies be integrated into multiplexed detection systems?

Advanced research increasingly employs multiplexed approaches to simultaneously detect multiple AGE species. CML antibodies can be incorporated into these systems through several technical strategies:

  • Multiplex bead-based assays: Conjugate different anti-AGE antibodies (including anti-CML) to spectrally distinct beads, enabling concurrent detection of various AGE compounds (CML, pentosidine, pyrraline) in a single sample volume.

  • Multi-epitope immunohistochemistry: Utilize antibodies against different AGE epitopes labeled with distinct fluorophores or chromogens for simultaneous visualization of multiple AGE modifications within tissue sections.

  • Protein microarrays: Spot various AGE-modified proteins onto array surfaces and probe with different antibodies to assess cross-reactivity profiles and relative abundances of different AGE species.

  • Antibody pairing optimization: When developing sandwich-based assays, methodically test different capture and detection antibody combinations to identify pairs that:

    • Recognize distinct CML epitopes without steric hindrance

    • Maintain specificity in complex biological matrices

    • Provide optimal signal-to-noise ratios

Key technical considerations for multiplexed approaches include careful antibody labeling to prevent altered binding properties, thorough cross-reactivity testing between antibody pairs, and using appropriate non-interfering buffer systems .

What factors contribute to inconsistent results when using CML antibodies in ELISA?

When encountering variability in CML antibody-based ELISA results, several methodological factors should be systematically evaluated:

  • Antibody storage and handling issues:

    • Degradation due to improper storage temperatures

    • Loss of activity from repeated freeze-thaw cycles

    • Protein aggregation causing functional changes

  • Assay protocol considerations:

    • Coating buffer composition and pH affecting antigen presentation

    • Blocking reagent compatibility with CML epitopes

    • Incubation times and temperatures influencing binding kinetics

    • Washing stringency removing specific versus non-specific interactions

  • Sample-specific factors:

    • Interfering substances in biological samples

    • Matrix effects in complex specimens

    • Variable CML modification degrees in different samples

    • Competing AGE structures present in samples

  • Standardization challenges:

    • Lack of internationally recognized standard units for AGE measurement

    • Batch-to-batch variation in reference materials

    • Different modification protocols yielding variable CML-protein standards

To address these issues, researchers should implement rigorous quality control measures, including running parallel standard curves with each assay, incorporating internal controls across plates, and potentially using competitive ELISA formats that have demonstrated superior consistency in complex sample analysis .

How can specificity of CML antibodies be confirmed in tissue immunohistochemistry?

Confirming CML antibody specificity in immunohistochemical applications requires implementation of multiple control strategies:

  • Absorption controls: Pre-incubate the antibody with excess soluble CML-modified proteins before tissue application. Specific staining should be substantially reduced or eliminated while non-specific staining remains unchanged.

  • Gradient controls: Test tissues with known differential CML content (e.g., young versus aged tissues, or tissues from normal versus diabetic subjects). Staining intensity should correlate with expected CML levels.

  • Multiple antibody validation: Compare staining patterns using different anti-CML antibody clones (such as mAb 2D6G2 and AGE-CML [6C7]) recognizing the same epitope. Consistent localization patterns support specificity .

  • Enzymatic pretreatment: Selective removal of carbohydrate modifications using specific enzymes before immunostaining can help distinguish CML epitopes from other glycation products.

  • Antibody dilution series: Perform staining with serial antibody dilutions (typical ranges for IHC: 1:50-100). Specific staining should decrease proportionally with dilution while background staining may diminish more rapidly .

  • Technical controls: Include isotype-matched control antibodies and secondary-only controls to identify potential non-specific binding of detection reagents.

The implementation of these validation steps is particularly important in aged or diseased tissues where autofluorescence and non-specific binding can confound interpretation of immunohistochemical results .

What strategies can optimize CML antibody performance in detecting low abundance AGE modifications?

When targeting low-abundance CML modifications, several methodological refinements can enhance detection sensitivity:

  • Signal amplification systems:

    • Tyramide signal amplification (TSA) can increase sensitivity by 10-100 fold

    • Poly-HRP detection systems provide enhanced signal without increased background

    • Quantum dot conjugates offer improved signal stability for extended imaging

  • Sample preparation optimization:

    • Enrichment of modified proteins through immunoprecipitation before analysis

    • Fractionation to reduce sample complexity and concentrate modified proteins

    • Selective reduction of disulfide bonds to improve epitope accessibility

  • Assay format selection:

    • Competitive ELISA formats often provide better sensitivity than direct binding assays

    • Time-resolved fluorescence immunoassays can reduce background interference

    • Proximity ligation assays offer single-molecule detection sensitivity

  • Antibody engineering approaches:

    • Affinity maturation of anti-CML antibodies via directed evolution

    • Humanization of mouse monoclonal antibodies for reduced background in human samples

    • Development of bispecific antibodies targeting both CML and a protein of interest

  • Data analysis techniques:

    • Background subtraction algorithms tailored to the specific assay platform

    • Signal averaging across technical replicates to improve signal-to-noise ratios

    • Standard addition methods to account for matrix effects

For quantitative applications, implementation of these optimization strategies allows detection limits approaching 0.4 ng/dL, sufficient for measuring physiologically relevant CML concentrations in most clinical scenarios .

How can CML antibodies be utilized in studying AGE-RAGE pathway activation?

CML antibodies provide valuable tools for investigating the interaction between Advanced Glycation End products and their Receptor (RAGE), a critical pathway in various pathologies:

  • Co-localization studies: Combine CML antibodies with RAGE-specific antibodies in immunofluorescence microscopy to visualize potential ligand-receptor interactions in tissues. This approach reveals spatial relationships between CML-modified proteins and RAGE expression patterns.

  • Receptor binding inhibition assays: Utilize CML antibodies to block specific AGE epitopes before exposure to RAGE-expressing cells, determining which structural elements are essential for receptor activation.

  • Pull-down experiments: Employ CML antibodies in immunoprecipitation protocols to isolate CML-modified proteins from biological samples, followed by analysis of their RAGE-binding properties through surface plasmon resonance or similar techniques.

  • Signaling pathway analysis: After confirming CML-modification using specific antibodies, monitor downstream effects of AGE-RAGE interaction, including:

    • NF-κB translocation

    • Pro-inflammatory cytokine production

    • Oxidative stress marker expression

    • Cellular migration and invasion properties

  • Therapeutic intervention assessment: Use CML antibodies to quantify changes in CML-modified protein levels following treatments targeting the AGE-RAGE axis, providing pharmacodynamic markers of therapeutic efficacy.

These methodological approaches help clarify the specific contribution of CML-modified proteins to RAGE-mediated pathologies, distinguishing them from effects of other AGE species .

What are the considerations for using CML antibodies in longitudinal biomarker studies?

Employing CML antibodies for tracking AGE accumulation over time requires careful methodological planning to ensure data validity and interpretability:

  • Assay standardization requirements:

    • Maintain consistent antibody lots throughout the study duration

    • Prepare and store reference standards under uniform conditions

    • Include internal control samples across all testing batches

    • Document and account for any necessary assay protocol modifications

  • Sample collection and storage protocols:

    • Standardize collection timing relative to patient factors (fasting status, time of day)

    • Establish uniform processing procedures to prevent ex vivo AGE formation

    • Implement consistent storage conditions (-80°C preferred) with minimal freeze-thaw cycles

    • Document sample age and storage history as potential covariates

  • Data normalization strategies:

    • Consider expressing CML levels relative to total protein content

    • Account for variations in sample matrix composition over time

    • Develop age and comorbidity-adjusted reference ranges

    • Address potential medication effects on AGE formation and clearance

  • Statistical approaches for longitudinal analysis:

    • Mixed effects modeling to account for repeated measurements

    • Time-series analysis to identify trends and fluctuation patterns

    • Change-point analysis to detect significant alterations in accumulation rate

    • Correlation with clinical outcomes using time-dependent covariates

Longitudinal studies using CML antibodies can reveal accumulation patterns predictive of disease progression, particularly in conditions like chronic kidney disease where AGE clearance is impaired. The detection limit of 0.4 ng/dL achievable with optimized competitive ELISA formats allows tracking of clinically relevant changes in CML levels over time .

How might recombinant antibody technologies improve CML detection specificity?

Advances in recombinant antibody engineering offer promising approaches to enhance CML detection specificity:

  • CDR optimization: Analysis of antibody variable domain sequences, such as those determined for mAb 2D6G2, enables targeted modifications to complementarity-determining regions (CDRs) to enhance CML epitope specificity. This rational design approach can reduce cross-reactivity with structurally similar AGE epitopes .

  • Single-chain variable fragments (scFvs): Converting conventional anti-CML antibodies to scFv format provides several advantages:

    • Reduced size enabling better tissue penetration

    • Elimination of constant regions that may contribute to non-specific binding

    • Simplified production in prokaryotic expression systems

    • Enhanced stability through engineered disulfide bonds or framework modifications

  • Bispecific antibody formats: Developing bispecific constructs that simultaneously recognize CML and a specific protein of interest allows targeted detection of CML modifications on particular proteins rather than total CML content.

  • Phage display selection: Starting with the variable domain sequences of established anti-CML antibodies, phage display technology enables directed evolution to isolate variants with improved specificity and affinity through iterative selection rounds.

  • Humanization approaches: For applications involving human samples, humanizing mouse-derived anti-CML antibodies can reduce background and improve signal-to-noise ratios in immunoassays.

These recombinant approaches build upon the foundation established with hybridoma-derived antibodies like mAb 2D6G2 and AGE-CML [6C7], potentially addressing current limitations in AGE detection specificity .

What role might CML antibodies play in developing therapeutic interventions targeting AGEs?

CML antibodies are increasingly valuable in developing and evaluating AGE-targeted therapeutics through several research applications:

  • Therapeutic antibody development:

    • Starting with characterized antibodies like mAb 2D6G2, therapeutic versions can be engineered to not only detect but also neutralize CML-modified proteins

    • Such antibodies could potentially reduce circulating AGE levels or block AGE-RAGE interactions

  • Target validation:

    • CML antibodies help validate the role of specific AGE modifications in disease pathology

    • Immunodepletion experiments using CML antibodies can demonstrate causality between CML-modified proteins and cellular effects

  • Pharmacodynamic biomarkers:

    • In clinical trials of AGE-lowering therapies, CML antibody-based assays provide quantitative measures of treatment efficacy

    • The competitive ELISA format with detection limits of 0.4 ng/dL enables sensitive monitoring of therapy-induced changes

  • Drug delivery applications:

    • Anti-CML antibodies can be conjugated to therapeutic payloads for targeted delivery to tissues with high AGE content

    • This approach could enable selective treatment of AGE-rich pathological sites

  • Companion diagnostics:

    • CML antibody-based assays could identify patients most likely to benefit from AGE-targeted therapies

    • Stratification based on baseline CML levels or accumulation rates may predict therapeutic response

Current research using antibodies like mAb 2D6G2 and AGE-CML [6C7] in these applications may lead to novel therapeutic strategies for conditions where AGE accumulation plays a pathogenic role, including chronic kidney disease, diabetes complications, and neurodegenerative disorders .

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