cogc-2 Antibody

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Description

Definition and Biological Role of COG2

COG2 is part of the COG complex, an eight-subunit (COG1–COG8) tethering machinery that regulates vesicular trafficking and glycosylation enzyme localization within the Golgi apparatus . Depletion or mutation of COG2 disrupts:

  • Glycosylation: Altered terminal galactosylation and sialylation of glycoproteins .

  • Vesicle tethering: Impaired retrograde transport of Golgi-resident enzymes like MGAT1 (mannosyl-glycoprotein acetylglucosaminyltransferase) and MAN2A1 (mannosidase α class 2A member 1) .

  • Cellular pathology: Linked to congenital disorders of glycosylation (CDG), characterized by multi-organ dysfunction .

COG2 Antibody Characteristics

Commercial COG2 antibodies (e.g., CAB6251, HPA076994) are rabbit polyclonal antibodies validated for applications such as Western blotting and immunofluorescence . Key features include:

PropertyDetail
Target specificityHuman COG2 (UniProt ID: Q8WTW3)
ApplicationsWestern blot (WB), immunofluorescence (IF), cell biology studies
Binding affinityHigh specificity to COG2’s N-terminal region (amino acids 1–300)
Clinical relevanceUsed to study COG2 mislocalization in CDG-II patients

Research Findings on COG2 Depletion

Studies using COG2 antibodies have revealed critical insights:

  • Glycosylation defects: COG2-deficient cells show increased binding of Galanthus nivalis lectin (GNL) and Griffonia simplicifolia lectin-II (GS-II), indicating exposed terminal mannose and GlcNAc residues due to defective glycosylation .

  • Vesicle accumulation: Depletion causes Golgi enzymes to mislocalize to COPI-coated vesicular structures, disrupting glycosylation .

  • Functional interplay: COG2 interacts with tethering factors (e.g., p115) and SNARE proteins to regulate intra-Golgi trafficking .

Table 1: Impact of COG2 Knockdown on Glycosylation Markers

LectinBinding TargetChange in COG2-Deficient Cells
Wheat Germ Agglutinin (WGA)Sialic acid/GlcNAcReduced binding (↓ sialylation)
GS-IIGlcNAc/agalactosylated N-glycansIncreased binding
GNLTerminal mannoseIncreased binding

Applications in Disease Research

COG2 antibodies are pivotal in:

  • Diagnosing CDG: Detecting COG2 mislocalization in patient fibroblasts .

  • Studying neurodegeneration: COG2 dysfunction correlates with impaired protein trafficking in models of Parkinson’s and Alzheimer’s diseases .

  • Viral infection studies: Golgi glycosylation defects impact viral entry mechanisms (e.g., SARS-CoV-2) .

Challenges and Future Directions

  • Antibody limitations: Cross-reactivity with other COG subunits (e.g., COG1, COG3) requires rigorous validation .

  • Therapeutic potential: COG2-targeted therapies could address glycosylation disorders but face challenges in delivery and specificity .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Composition: 50% Glycerol, 0.01M Phosphate Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
cogc-2 antibody; cgo-2 antibody; cog-2 antibody; ldlc antibody; C06G3.10Conserved oligomeric Golgi complex subunit 2 antibody; COG complex subunit 2 antibody; Component of oligomeric Golgi complex 2 antibody; LDLC protein homolog antibody
Target Names
cogc-2
Uniprot No.

Target Background

Function
Essential for maintaining normal Golgi apparatus morphology and function.
Database Links

KEGG: cel:CELE_C06G3.10

STRING: 6239.C06G3.10

UniGene: Cel.113

Protein Families
COG2 family
Subcellular Location
Golgi apparatus membrane; Peripheral membrane protein; Cytoplasmic side.

Q&A

FAQs for Researchers on Antibody Research Methodologies (Generalized Framework)
Note: While "cogc-2 Antibody" is not directly referenced in available literature, this FAQ adopts a generalized approach based on antibody research principles from peer-reviewed sources.

Advanced Research Questions

How to resolve contradictions in neutralization data across viral variants?

  • Strategy:

    • Perform cryo-EM/crystallography to compare antibody-RBD interactions (e.g., C118 vs. SARS-CoV-2 variants in ).

    • Quantify neutralization using pseudovirus assays with normalized viral loads .

    • Analyze escape mutations via deep mutational scanning .

What methods identify broadly neutralizing antibodies against conserved epitopes?

  • Workflow:

    • Screen convalescent sera against phylogenetically diverse antigens (e.g., sarbecovirus RBDs ).

    • Isolate B cells using antigen-specific sorting with fluorophore-conjugated probes .

    • Characterize binding breadth via yeast display libraries paired with NGS .

How to optimize antibody engineering for enhanced therapeutic efficacy?

  • Key considerations:

    • Introduce somatic hypermutation to improve affinity (e.g., anti-LCAT antibodies in ).

    • Engineer bispecific formats targeting two conserved epitopes (e.g., class 4 antibodies in ).

    • Validate in vivo using humanized mouse models with disease-relevant endpoints .

Data Contradiction Analysis

Discrepancies in antibody-mediated complement activation assays: How to troubleshoot?

  • Root causes:

    • Lot-to-lot variability in Fc glycosylation affecting C1q binding .

    • Assay interference from serum components (e.g., endogenous immunoglobulins).

  • Solutions:

    • Standardize antibody purification (e.g., protein A/G affinity chromatography ).

    • Use complement-depleted sera as negative controls .

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