COPE Human

Coatomer Protein Complex Subunit Epsilon Human Recombinant
Shipped with Ice Packs
In Stock

Description

Role in Vesicular Transport

COPE is a subunit of the coatomer complex (COPI), which facilitates:

  • Retrograde Transport: Critical for recycling proteins from the Golgi apparatus to the endoplasmic reticulum (ER) .

  • Binding Specificity: Recognizes dilysine motifs (KKXX) on cargo proteins, ensuring selective vesicle budding .

Complex Assembly

The COPI complex comprises seven subunits:

  1. α-COP

  2. β-COP

  3. β'-COP

  4. γ-COP

  5. δ-COP

  6. ε-COP (COPE)

  7. ζ-COP .

Key Interaction: COPE directly interacts with COPA (α-COP subunit), stabilizing the COPI structure .

Experimental Use Cases

  • In Vitro Binding Assays: To study COPI assembly and cargo recognition .

  • Structural Studies: X-ray crystallography and NMR to map ε-COP’s role in vesicle formation .

Genetic Associations

While mutations in COPE are rare, dysregulation of COPI components is implicated in:

  • Neurodegenerative Disorders: Altered vesicular trafficking in Alzheimer’s and Parkinson’s diseases .

  • Cancer: Overexpression linked to enhanced cell proliferation in glioblastoma .

Challenges

  • Functional Redundancy: Overlap with other COPI subunits complicates isoform-specific studies .

  • Structural Dynamics: Real-time visualization of COPI assembly remains technically challenging .

Emerging Areas

  • Therapeutic Targeting: Small-molecule inhibitors of COPI for cancer therapy .

  • Gene Editing: CRISPR-based models to dissect ε-COP’s role in developmental biology .

Product Specs

Introduction
Coatomer Protein Complex Subunit Epsilon, also known as COPE, is an epsilon subunit of the coatomer protein complex. Coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly interacts with Golgi non-clathrin-coated vesicles. COPE is essential for vesicle budding from Golgi membranes and the retrograde transport of dilysine-tagged proteins from the Golgi to the ER. The coatomer complex comprises at least seven subunits: alpha, beta, beta', gamma, delta, epsilon, and zeta. Several alternatively spliced transcript variants encoding different isoforms of COPE have been identified.
Description
Recombinant human COPE protein, expressed in E. coli, is a single, non-glycosylated polypeptide chain containing 331 amino acids (residues 1-308) and having a molecular mass of 36.9 kDa. The protein includes a 23 amino acid His-tag at the N-terminus and is purified using proprietary chromatographic techniques.
Physical Appearance
Clear, colorless, and sterile-filtered solution.
Formulation
The COPE protein solution is provided at a concentration of 0.25 mg/ml and contains phosphate-buffered saline (pH 7.4), 20% glycerol, and 1 mM DTT.
Stability
For short-term storage (up to 2-4 weeks), the product can be stored at 4°C. For extended storage, it is recommended to store the product frozen at -20°C. To ensure long-term stability, the addition of a carrier protein (0.1% HSA or BSA) is recommended. Multiple freeze-thaw cycles should be avoided.
Purity
The purity of the COPE protein is greater than 90.0% as determined by SDS-PAGE analysis.
Synonyms
Coatomer Protein Complex, Subunit Epsilon, Epsilon-Coat Protein, Epsilon-COP, Coatomer Epsilon Subunit, Coatomer Subunit Epsilon, Epsilon Coat Protein, Coatomer subunit epsilon.
Source
Escherichia Coli.
Amino Acid Sequence
MGSSHHHHHH SSGLVPRGSH MGSMAPPAPG PASGGSGEVD ELFDVKNAFY IGSYQQCINE AQRVKLSSPE RDVERDVFLY RAYLAQRKFG VVLDEIKPSS APELQAVRMF ADYLAHESRR DSIVAELDRE MSRSVDVTNT TFLLMAASIY LHDQNPDAAL RALHQGDSLE CTAMTVQILL KLDRLDLARK ELKRMQDLDE DATLTQLATA WVSLATGGEK LQDAYYIFQE MADKCSPTLL LLNGQAACHM AQGRWEAAEG LLQEALDKDS GYPETLVNLI VLSQHLGKPP EVTNRYLSQL KDAHRSHPFI KEYQAKENDF DRLVLQYAPS A.

Q&A

Basic Research Questions

  • What is the COPE program and what research populations has it been validated for?

    COPE (Creating Opportunities for Personal Empowerment) is an evidence-based, manualized cognitive-behavioral skills-building intervention originally designed for adolescents experiencing depression and anxiety. Research has validated the COPE program across multiple populations including children (ages 7-11), teenagers, and young adults (ages 18-24). The program has been adapted and tested for specific populations including adolescents with chronic daily headaches, school-age children with asthma, individuals who have experienced bullying, and pregnant Black and Hispanic women experiencing depression, anxiety, and stress . The research validation has occurred through more than 20 studies showing efficacy in decreasing anxiety, depression, stress, and suicidal ideation, while enhancing self-esteem and healthy lifestyle behaviors .

  • How has the COPE program evolved through experimental research design?

    The original COPE program was designed as a 15-session intervention (COPE Healthy Lifestyles TEEN) combining cognitive-behavioral skills with mindfulness, nutrition, and physical activity components. Through systematic experimental research, the program evolved when researchers isolated 7 CBT-based sessions from the original program to create a more focused intervention specifically targeting depression and anxiety. This design adaptation demonstrates the application of true experimental research principles, where researchers identified specific independent variables (CBT components) and measured their effect on dependent variables (depression and anxiety symptoms) . This iterative process illustrates how experimental research can refine interventions based on outcome data, maintaining research rigor while adapting to clinical needs .

  • What research design approaches have been used to evaluate the COPE program?

    Research on the COPE program has employed true experimental designs with randomized control trials. In one key study, teenagers were randomly assigned to either receive the COPE intervention or join an attention control group. This approach follows the posttest-only control group design, one of the three main structures of true experimental research . The research measured multiple outcome variables including physical activity levels, body mass index, academic competence, health course grades, healthy behaviors, and alcohol use. For participants with extremely elevated depressive symptoms at baseline, measurements were taken immediately after the intervention and at 12 months post-intervention, showing significantly lower depressive symptoms in the COPE group compared to controls .

  • What data collection and analysis methods are appropriate for COPE research?

    COPE research typically employs mixed methods approaches, combining quantitative measurements (using validated psychometric tools to assess depression, anxiety, and behavioral outcomes) with qualitative data collection. When designing COPE research, investigators should begin with a clearly defined research question, identify independent variables (the COPE intervention components) and dependent variables (mental health outcomes), develop testable hypotheses, and implement appropriate control mechanisms . Given the multidimensional nature of mental health data, researchers should consider implementing contradiction checks in their data quality protocols, particularly when examining interdependent data items that may present conflicting values . The research analysis plan should enable detection of differences caused by independent variables while providing unbiased estimates of inputs and associated uncertainties .

Advanced Research Questions

  • How can researchers effectively address contradictions in COPE-related data sets?

    When analyzing COPE research data, contradictions often emerge as impossible combinations of values in interdependent data items. Researchers should implement a structured notation of contradiction patterns using the (α, β, θ) parameters: α representing the number of interdependent items, β indicating the number of contradictory dependencies defined by domain experts, and θ representing the minimal number of required Boolean rules to assess these contradictions . For COPE mental health research, this might involve analyzing contradictions between self-reported behavioral changes and observed clinical outcomes. Current data quality assessment tools primarily implement the (2,1,1) class (two interdependent items, one contradictory dependency, one Boolean rule), but COPE research involving multiple mental health variables may require more complex contradiction patterns . Researchers should develop a structured classification of contradiction checks to effectively support generalized contradiction assessment frameworks across the various domains of COPE applications.

  • What methodological considerations are essential when adapting the COPE program for new research populations?

    Adapting the COPE program for research with new populations requires rigorous methodological consideration. Researchers must maintain fidelity to core CBT principles while ensuring developmental and contextual appropriateness. The adaptation process should follow a systematic pathway: 1) Identify the specific needs of the target population through preliminary research; 2) Modify language, examples, and activities while preserving the theoretical mechanisms of action; 3) Pilot test the adapted protocol with small samples; 4) Refine based on feedback and preliminary outcomes; and 5) Validate through controlled trials . Researchers should carefully document all adaptations and their rationale to maintain scientific integrity. When adapting COPE for populations with chronic conditions (like headaches or asthma), researchers must additionally consider disease-specific factors and potential interactions between physical and psychological variables . The adaptation should be guided by a clear theoretical framework that explicates how the intervention components are expected to influence specific outcome variables in the new population.

  • How can qualitative research methods enhance COPE program evaluation and implementation?

    Qualitative research methods provide essential insights into the lived experiences of COPE program participants, implementation processes, and contextual factors influencing outcomes. Researchers should consider employing diverse qualitative approaches including in-depth interviews, focus groups, participant observation, and archival research to capture the multidimensional nature of COPE experiences . Feminist and indigenous approaches can be particularly valuable when working with marginalized populations, ensuring cultural sensitivity and relevance . Participatory action research methodologies align well with COPE's empowerment philosophy, allowing participants to co-create knowledge and inform program refinements . Cross-cultural research considerations are essential when implementing COPE across diverse populations, requiring researchers to examine how cultural contexts shape program engagement and outcomes . Qualitative data should be analyzed using rigorous methods such as thematic analysis, grounded theory, or interpretative phenomenological analysis to identify patterns, generate theories, and inform future research directions.

  • What experimental design considerations are critical when comparing COPE to other mental health interventions?

    When designing comparative effectiveness research for COPE versus other interventions, researchers must carefully consider several methodological elements. First, the selection of appropriate comparison interventions should match COPE in terms of intensity, duration, and delivery format to isolate specific therapeutic mechanisms. The experimental design should include careful randomization procedures, blinding where possible (recognizing the challenges of blinding in behavioral interventions), and rigorous control for confounding variables . Researchers must define clear primary and secondary outcome measures that align with both COPE's theoretical foundations and clinically meaningful endpoints. For complex interventions like COPE, researchers should consider employing factorial designs that can isolate the effects of specific components, or sequential multiple assignment randomized trials (SMART) to examine adaptive intervention strategies . Baseline equivalence between groups must be established on key demographic and clinical variables, and statistical analyses should account for clustering when COPE is delivered in group settings. Additionally, researchers should incorporate appropriate follow-up periods (as demonstrated in the 12-month follow-up assessments in previous COPE research) to evaluate the sustainability of intervention effects .

  • What are the methodological approaches for integrating COPE within existing healthcare delivery systems for research purposes?

    Integrating COPE within healthcare settings for research purposes requires methodological approaches that address both implementation science and effectiveness research questions. Researchers should employ hybrid effectiveness-implementation designs that simultaneously evaluate clinical outcomes and implementation processes. This approach requires clear specification of implementation strategies, assessment of implementation outcomes (e.g., fidelity, adoption, sustainability), and measurement of patient-level clinical outcomes . The research design should include mixed methods, combining quantitative measures of clinical effectiveness with qualitative exploration of implementation barriers and facilitators. Researchers must establish protocols for training healthcare providers in COPE delivery, including competency assessment and ongoing supervision to maintain intervention fidelity . Data collection should capture multi-level factors influencing implementation, including provider characteristics, organizational context, and system-level policies. Time-series designs or stepped-wedge cluster randomized trials may be particularly appropriate for evaluating COPE implementation across multiple healthcare sites. Researchers should develop and validate implementation tools specific to COPE, such as fidelity checklists, provider training materials, and adaptation guidance that preserves core elements while allowing contextual flexibility.

  • How can researchers effectively analyze the therapeutic mechanisms of action in COPE interventions?

    Analyzing therapeutic mechanisms requires sophisticated research approaches that go beyond simple pre-post outcome measurement. Researchers should employ mediation analysis to identify the specific cognitive, emotional, and behavioral pathways through which COPE produces its effects . This requires the measurement of potential mediators (e.g., cognitive restructuring skills, behavioral activation, emotional regulation) at multiple time points during the intervention. Research designs should incorporate dismantling or component analysis approaches that systematically vary intervention elements to determine their relative contribution to outcomes. For example, researchers might compare the full COPE program to versions that emphasize specific components (CBT vs. physical activity) . Ecological momentary assessment methods can capture real-time data on symptoms, cognitions, and behaviors in participants' natural environments, providing more granular insights into change processes. Researchers should employ advanced statistical approaches such as latent growth curve modeling, structural equation modeling, or dynamic systems analysis to examine trajectories of change and complex interrelationships between variables. Neuroimaging or psychophysiological methods might also be incorporated to examine biological correlates of therapeutic change, particularly for understanding how COPE affects stress response systems. This methodological sophistication is essential for advancing theoretical understanding of how COPE works and for whom it works best.

Research Implementation Considerations

  • What are the most effective approaches for measuring fidelity in COPE intervention research?

    Measuring intervention fidelity in COPE research requires comprehensive assessment across multiple dimensions. Researchers should develop fidelity instruments that evaluate: 1) adherence to core content, 2) quality of delivery, 3) participant engagement, 4) differentiation from other interventions, and 5) adaptations made during implementation . Effective measurement approaches include direct observation of sessions using standardized rating scales, audio/video recording with expert coding, provider self-assessment, and participant feedback. For the COPE program specifically, researchers should develop session-specific fidelity checklists that capture both the delivery of key cognitive-behavioral techniques and the quality of therapeutic interactions. Fidelity assessment should occur throughout the intervention period rather than just at the beginning, as drift in implementation may occur over time. Researchers should establish minimum fidelity thresholds a priori and implement ongoing supervision and feedback to maintain high-quality delivery. When adapting COPE for new populations or settings, fidelity measurement should distinguish between appropriate adaptations that enhance cultural or contextual fit and inadvertent modifications that may compromise core therapeutic mechanisms .

  • How can researchers design studies to evaluate the long-term sustainability of COPE program effects?

    Designing research to assess long-term sustainability of COPE effects requires methodological approaches that extend beyond typical efficacy trials. Researchers should incorporate extended follow-up periods (12, 24, and 36+ months) with carefully planned retention strategies to minimize attrition bias . Study designs should include measurement of both proximal outcomes (symptom reduction) and distal outcomes (functional improvements, quality of life, educational achievement) to capture the full impact of the intervention. Researchers should consider sequential longitudinal designs that can distinguish between naturally occurring developmental changes and intervention effects. Sustainability research should measure potential moderating factors that might influence long-term outcomes, including participant characteristics, post-intervention experiences, and environmental contexts. Mixed-methods approaches are particularly valuable, combining quantitative trajectory analysis with qualitative exploration of participants' experiences maintaining changes over time. Researchers might also employ naturalistic designs that follow COPE recipients in real-world settings without additional research support, providing ecological validity to sustainability claims. Additionally, economic analyses should be incorporated to determine the cost-effectiveness of COPE relative to other interventions or usual care over extended time horizons, providing critical information for policy and implementation decisions.

  • What methodological approaches are recommended for adapting and validating COPE for cross-cultural research contexts?

    Cross-cultural adaptation of COPE requires systematic methodological approaches that ensure both cultural validity and therapeutic integrity. Researchers should employ sequential mixed-methods designs beginning with formative qualitative research to understand the cultural context, relevant mental health concepts, and potential implementation barriers . The adaptation process should follow established frameworks such as the Ecological Validity Model or Cultural Adaptation Process Model, with documentation of all modifications. Forward and backward translation protocols should be used when adapting to new languages, followed by cognitive interviewing to ensure conceptual equivalence. Researchers should assess the cultural validity of outcome measures, potentially developing or adapting assessment tools that capture culturally relevant expressions of distress and well-being . Pilot testing should include both quantitative feasibility metrics and qualitative feedback from stakeholders. When conducting full-scale evaluation, researchers should consider including cultural factors as potential moderators of treatment effects and measuring cultural processes (e.g., acculturation, cultural identity) that might influence outcomes. Community-based participatory research approaches are particularly valuable in cross-cultural contexts, ensuring that research questions, methods, and interpretations reflect community priorities and perspectives . Researchers should establish international collaborations to facilitate meaningful cross-cultural comparisons and knowledge exchange.

  • What data collection and analysis strategies are recommended for evaluating the COPE program in school-based settings?

    Evaluating COPE in school settings requires specialized research approaches that address the unique challenges and opportunities of educational contexts. Researchers should employ cluster-randomized designs that account for the nested structure of students within classrooms and schools, using appropriate statistical methods such as multilevel modeling to address potential intraclass correlation . Data collection should include both mental health outcomes and educationally relevant variables such as academic performance, attendance, classroom behavior, and school connectedness. Multiple informant approaches are essential, collecting data from students, teachers, parents, and school records to capture the full impact of the intervention across contexts. Implementation measures should assess school-level factors that might influence program effectiveness, including administrative support, competing priorities, and scheduling constraints. Researchers should consider employing interrupted time-series designs or rolling enrollment approaches that accommodate academic calendars and minimize disruption to educational activities. Mixed-methods designs are particularly valuable, combining quantitative outcome assessment with qualitative exploration of implementation processes through interviews, focus groups, and classroom observations . Additionally, researchers should develop user-friendly data collection protocols that minimize burden on teachers and students while maintaining scientific rigor, potentially incorporating digital tools or existing school assessment systems when appropriate.

Data Analysis and Methodological Frameworks

  • What are the most appropriate statistical approaches for analyzing clustered data in COPE group intervention research?

    Analyzing clustered data from COPE group interventions requires sophisticated statistical approaches that account for potential intraclass correlation. Multilevel modeling (also called hierarchical linear modeling) should be the primary analytic approach, allowing researchers to partition variance at individual and group levels while examining cross-level interactions . When sample sizes are sufficient, structural equation modeling with cluster-robust standard errors provides another appropriate method, particularly for examining mediation pathways within clustered designs. Researchers should conduct power analyses specifically designed for clustered data, accounting for expected intraclass correlation coefficients and cluster sizes. For smaller studies, alternatives such as generalized estimating equations or cluster-robust standard errors may be more appropriate than full multilevel models. When analyzing longitudinal clustered data, researchers should consider models that account for both within-person correlation over time and within-group correlation at each timepoint, such as three-level growth models. For implementation research examining COPE across multiple sites or settings, researchers should employ methods that can distinguish between intervention effects and site effects, potentially using site as a random effect or employing fixed effects with site-by-treatment interactions. Missing data approaches should consider the potential for non-random missingness at both individual and cluster levels, employing methods such as multiple imputation or full information maximum likelihood estimation within the multilevel framework.

Table 1: Comparing Statistical Approaches for Clustered Data in COPE Research

Statistical ApproachAdvantagesLimitationsAppropriate Use Case
Multilevel ModelingAccounts for nested data structure; Can model random effects; Handles unbalanced designsRequires larger sample sizes; Assumes normality of residualsPrimary analysis for COPE groups with sufficient sample size
Generalized Estimating EquationsMore robust to misspecification; Works with smaller samplesPopulation-averaged rather than subject-specific estimates; Limited random effects modelingWhen sample size is limited or primary interest is in population-average effects
Cluster-Robust Standard ErrorsSimple to implement; Makes minimal assumptionsDoes not model cluster-level random effects; Less efficient than multilevel modelsAs a sensitivity analysis or when clusters are few but large
Three-Level Growth ModelsAccounts for both time and group clustering; Models individual trajectoriesComputationally intensive; Requires substantial sample sizeLongitudinal COPE studies with repeated measures nested within individuals nested within groups
  • How should researchers approach contradiction and inconsistency detection in COPE measurement data?

    Addressing contradictions in COPE research data requires systematic approaches to ensure data quality and validity. Researchers should implement the (α, β, θ) contradiction pattern framework to formally define and detect impossible or implausible combinations of values across interdependent measures . For COPE-specific research, this might involve defining contradiction patterns for symptom reporting (e.g., contradictions between self-reported depression symptoms and functional measures) or implementation fidelity data. Boolean logic should be applied to create efficient rule sets that can detect these contradictions while minimizing the number of rules needed for comprehensive coverage . Researchers should distinguish between different types of contradictions: logical impossibilities (e.g., reporting both the absence and presence of a symptom simultaneously), clinical implausibilities (e.g., reporting severe functional impairment with minimal symptom endorsement), and temporal inconsistencies (e.g., reporting improvement without intervention). Data cleaning protocols should include decision rules for handling detected contradictions, whether through verification, imputation, or sensitivity analyses that include and exclude contradictory cases. Visualization techniques such as heat maps or network graphs can help identify patterns of contradictions across the dataset, potentially revealing systematic measurement issues or respondent misunderstanding. Researchers should also implement preventive approaches during data collection, such as real-time contradiction checking in electronic assessments, which can prompt respondents to clarify apparently contradictory responses before submission.

  • What methodological frameworks best support mixed-methods research on the COPE program?

    Mixed-methods research on COPE benefits from explicit methodological frameworks that guide the integration of quantitative and qualitative approaches. Researchers should consider employing explanatory sequential designs, where quantitative outcome data is collected first, followed by qualitative investigation to explain patterns or unexpected findings . Alternatively, exploratory sequential designs begin with qualitative inquiry to identify important constructs and mechanisms, followed by quantitative measurement and testing. Convergent parallel designs collect both data types simultaneously and integrate findings during analysis to provide complementary perspectives. For implementation research, researchers should consider the Consolidated Framework for Implementation Research (CFIR) or the Reach, Effectiveness, Adoption, Implementation, and Maintenance (RE-AIM) framework to guide mixed-methods data collection across multiple dimensions of implementation. Joint displays should be used to visually integrate quantitative and qualitative findings, highlighting convergence, divergence, and complementarity. Integration should occur at multiple levels: design (how methods relate chronologically), methods (how sampling connects across approaches), analysis (how data types inform each other), and interpretation (how integrated findings address research questions). Qualitative approaches should be selected based on their alignment with specific research questions, ranging from phenomenological methods to understand lived experiences, to ethnographic approaches for cultural contexts, to case study designs for implementation processes . Quality criteria should be established for both quantitative rigor (validity, reliability) and qualitative trustworthiness (credibility, transferability) while also addressing mixed-methods specific quality indicators such as integration quality and inference quality.

Product Science Overview

Structure and Function

The coatomer complex is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles . It is essential for the budding of vesicles from Golgi membranes and is involved in the retrograde transport of dilysine-tagged proteins from the Golgi to the ER . The coatomer complex consists of at least seven subunits: alpha, beta, beta’, gamma, delta, epsilon, and zeta .

Gene and Protein Information

The COPE gene, located on chromosome 19 (19p13.11), encodes the epsilon subunit of the coatomer complex . This gene is expressed in various tissues, including the anterior pituitary, adrenal glands, thyroid gland, stomach, pancreas, and salivary glands . The protein encoded by the COPE gene is involved in several biological processes, including vesicle-mediated transport, protein transport, and maintaining Golgi structural integrity .

Biological Significance

The coatomer complex, including the epsilon subunit, is crucial for the proper functioning of the secretory pathway. It influences the processing, activity, and endocytic recycling of LDL receptors and other proteins . In mammals, the coatomer can only be recruited by membranes associated with ADP-ribosylation factors (ARFs), which are small GTP-binding proteins .

Clinical Relevance

Mutations or dysregulation of the COPE gene can lead to various diseases. For instance, COPE has been associated with Cepacia Syndrome . Understanding the function and regulation of the COPE gene and its protein product is essential for developing therapeutic strategies for diseases related to vesicle transport and protein trafficking.

Research and Applications

Recombinant human COPE protein is used in research to study its role in intracellular transport and its interactions with other proteins. It is also used to investigate the mechanisms underlying diseases associated with coatomer complex dysfunction.

Quick Inquiry

Personal Email Detected
Please use an institutional or corporate email address for inquiries. Personal email accounts ( such as Gmail, Yahoo, and Outlook) are not accepted. *
© Copyright 2025 TheBiotek. All Rights Reserved.