CKB1 Antibody

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Description

Introduction to CKB1 Antibody

The CKB1 Antibody is a specialized immunoglobulin targeting creatine kinase B-type (CKB), a cytoplasmic enzyme critical for cellular energy homeostasis. This antibody class is widely used in biomedical research to study CKB's role in tissues with high energy demands (e.g., brain, heart, and cancer cells) . CKB antibodies are essential tools for detecting CKB expression in neurological disorders, cancer research, and metabolic studies .

Development and Production

CKB1 Antibodies are produced as monoclonal or polyclonal variants using diverse platforms:

  • Monoclonal Antibodies: Generated via hybridoma technology (e.g., mouse-derived clone CK-BYK/21E10) .

  • Polyclonal Antibodies: Raised in rabbits using recombinant CKB fragments (e.g., residues 1–250) .

Engineering advancements include stabilizing CH1-CK heterodimerization to improve pharmacokinetics and reduce proteolysis . For example, scaffold modifications in HIV-1 fusion proteins increased serum persistence by enhancing neonatal Fc receptor (FcRn) binding .

Research Applications

CKB1 Antibodies are validated for multiple techniques:

ApplicationProtocol DetailsKey Findings
Western Blot (WB)1:1,000–1:5,000 dilution; detects 43 kDa band Overexpression in bladder cancer and SCLC
Immunohistochemistry (IHC)1:50–1:500 dilution; formalin-fixed paraffin sectionsCKB expression in Purkinje cells and urothelial carcinomas
Immunofluorescence (IF)1:200 dilution; methanol-fixed cells Localizes CKB in cytoplasmic compartments
Flow Cytometry1:50 dilution; cell surface and intracellular stainingIdentifies CKB-positive cancer cells

These antibodies have identified CKB as a biomarker in paraneoplastic neurological syndromes (PNS), where anti-CKB autoantibodies correlate with cerebellar ataxia and bladder cancer .

Association with Neurological Disorders

Anti-CKB antibodies are implicated in paraneoplastic cerebellar degeneration (PCD), characterized by Purkinje cell loss . Key findings:

  • Specificity: Absent in healthy donors but present in 100% of PCD patients with bladder cancer .

  • Mechanism: Anti-CKB antibodies bind cerebellar neurons and cancer cells, triggering immune-mediated neurodegeneration .

Cancer Research

CKB is overexpressed in aggressive cancers:

  • Small cell lung cancer (SCLC): 80% of tumors show high CKB levels .

  • Bladder cancer: Anti-CKB antibodies serve as diagnostic markers for PNS-associated cases .

Recent Advances and Future Directions

  • Therapeutic Engineering: Stabilized CH1-CK heterodimers improve antibody half-life in vivo, as demonstrated in HIV-1 fusion proteins .

  • Diagnostic Potential: Anti-CKB antibodies are under investigation for early detection of PNS in cancer patients .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
CKB1 antibody; At5g47080 antibody; K14A3.3Casein kinase II subunit beta-1 antibody; CK II beta-1 antibody
Target Names
CKB1
Uniprot No.

Target Background

Function
CKB1 Antibody plays a complex role in regulating the basal catalytic activity of the alpha subunit. The tetrameric holoenzyme CK2, composed of two alpha and two beta subunits, phosphorylates the transcription factor GBFl, resulting in stimulation of its DNA binding activity. CK2 also phosphorylates the transcription factor PIF1 after an exposure to light, leading to proteasome-dependent degradation of PIF1 and promoting photomorphogenesis. Furthermore, CK2 phosphorylates translation initiation factors, potentially participating in the regulation of translation initiation. Finally, CK2 stimulates the binding of CCA1 to promoters (probable).
Database Links

KEGG: ath:AT5G47080

STRING: 3702.AT5G47080.1

UniGene: At.23955

Protein Families
Casein kinase 2 subunit beta family
Subcellular Location
Cytoplasm, cytosol. Nucleus.

Q&A

What is the biological significance of Creatine Kinase B type (CKB)?

Creatine kinase B type is an essential cytoplasmic enzyme involved in cellular energy homeostasis. It reversibly catalyzes the transfer of phosphate between ATP and various phosphogens (e.g., creatine phosphate), playing a central role in energy transduction in tissues with fluctuating energy demands such as skeletal muscle, heart, brain, and spermatozoa. The enzyme functions critically in the rapid regeneration of ATP from ADP, using phosphocreatine as a phosphate donor in tissues requiring burst energy production. Recent research has revealed that CKB also acts as a key regulator of adaptive thermogenesis through the futile creatine cycle, where it localizes to mitochondria of thermogenic fat cells and mediates phosphorylation of creatine. This process initiates a cycle of creatine phosphorylation and dephosphorylation that dissipates the high energy charge of phosphocreatine as heat without performing mechanical or chemical work .

What are the main applications of CKB1 antibodies in research settings?

CKB1 antibodies have demonstrated utility across multiple experimental platforms including:

  • Western blot (WB): For protein expression quantification and molecular weight confirmation

  • Immunohistochemistry (IHC-P): For tissue localization studies in paraffin-embedded samples

  • Immunocytochemistry/Immunofluorescence (ICC/IF): For cellular localization studies

  • Enzyme-linked immunosorbent assay (ELISA): For quantitative detection in solution

  • Immunoprecipitation (IP): For protein complex isolation studies

These applications enable researchers to investigate CKB expression patterns, subcellular localization, protein-protein interactions, and functional roles in various physiological and pathological contexts .

How can I distinguish between CKB and other creatine kinase isoforms in my experiments?

Distinguishing between creatine kinase isoforms (CK-BB, CK-MB, and CK-MM) requires careful selection of antibodies and experimental approaches:

Antibody Selection Strategy:

  • Use antibodies specifically raised against unique epitopes of CKB that do not cross-react with other isoforms

  • Verify specificity through validation against recombinant proteins of all isoforms

Experimental Approaches:

  • Two-site immunometric assays: Employing sandwich complexes with antibodies recognizing specific epitopes of CKB. This approach has been shown to dramatically reduce cross-reactivity with other isoforms like CK-MM and CK-MB .

  • Chemiluminescent/magnetic separation assays: These have demonstrated superior specificity. For example, labeling anti-CK-MB with acridinium ester and immobilizing anti-CK-BB on paramagnetic particles creates a highly sensitive assay capable of detecting as little as 1 μg/L of target protein with minimal interference from other isoforms .

  • Electrophoretic separation: This method can be used as a complementary approach to confirm antibody specificity, with each isoform migrating differently due to charge differences.

Validation experiments have confirmed that well-characterized CKB antibodies show negligible reactivity with CK-MM and CK-MB isoforms, especially when using two-site assay configurations .

What factors influence the sensitivity and specificity of CKB detection in tissue samples?

Several critical factors affect the detection quality of CKB in experimental settings:

FactorImpact on DetectionOptimization Strategy
Antibody AffinityHigher affinity correlates with increased sensitivitySelect antibodies with documented high binding constants (e.g., Keq ≥ 10^10 L/mol)
Epitope AccessibilityHidden epitopes reduce detection efficiencyOptimize antigen retrieval methods for IHC/ICC applications
Sample PreparationInadequate fixation can destroy epitopesUse standardized protocols with controlled fixation times
Background SignalNon-specific binding decreases specificityImplement appropriate blocking and washing steps
Detection SystemAmplification methods affect sensitivity thresholdConsider chemiluminescent detection for low-abundance targets

Research has demonstrated that radioimmunoassays using high-affinity antibodies (Keq = 1.4 × 10^11 L/mol) can achieve detection limits as low as 1 μg/L in 100 μL samples, with within-assay precision (CV) of 5% and between-assay precision of 14-15% at concentrations of 6-14 μg/L . Similarly, immunochemiluminometric assays have shown linear detection ranges up to 400 μg/L with excellent correlation (r = 0.94) to established electrophoretic methods .

How can I resolve contradictory CKB expression data between different detection methods?

Contradictory results between different detection methods are common challenges in CKB research. Resolution strategies include:

  • Method-specific considerations:

    • Western blotting detects denatured protein and may miss conformational epitopes

    • IHC preserves tissue architecture but may have variable epitope accessibility

    • ELISA measures soluble protein and may detect fragments not visible by WB

  • Antibody validation approach:

    • Use multiple antibodies targeting different epitopes of CKB

    • Compare monoclonal vs. polyclonal antibodies (monoclonals offer higher specificity but may be more sensitive to epitope modifications)

    • Validate with recombinant protein and positive/negative control tissues

  • Data reconciliation strategies:

    • Implement orthogonal validation using mRNA expression analysis

    • Consider post-translational modifications that might affect epitope recognition

    • Evaluate subcellular localization differences that might explain discrepancies

Researchers have documented cases where antibodies performed excellently in one application (e.g., ELISA) but poorly in others (e.g., IHC). For instance, characterization data from the CPTC-CKB-1 antibody showed "High Binding" results in Indirect ELISA but "Negative" results in IHC tissue applications, highlighting the importance of application-specific validation .

What are the optimal conditions for using CKB1 antibodies in Western blot applications?

Optimizing Western blot protocols for CKB1 antibodies requires attention to several critical parameters:

Sample Preparation:

  • Tissue homogenization buffer: 50 mM Tris-HCl (pH 7.4), 150 mM NaCl, 1% Triton X-100, 0.5% sodium deoxycholate, with protease inhibitor cocktail

  • Protein loading: 20-30 μg total protein per lane for most tissue samples; higher amounts (40-50 μg) may be needed for tissues with lower CKB expression

Electrophoresis and Transfer:

  • Separation: 10-12% SDS-PAGE gels provide optimal resolution for CKB (~43 kDa)

  • Transfer: Semi-dry transfer at 15V for 30 minutes or wet transfer at 100V for 60 minutes

Antibody Incubation:

  • Primary antibody dilution: 1:500 to 1:1000 for most CKB1 antibodies

  • Incubation conditions: Overnight at 4°C in 5% non-fat milk or BSA in TBST

  • Secondary antibody: HRP-conjugated anti-rabbit IgG at 1:5000 dilution for 1 hour at room temperature

Detection:

  • Enhanced chemiluminescence (ECL) detection systems provide excellent sensitivity

  • For quantitative analysis, use digital imaging systems with dynamic range verification

Research has shown that rabbit monoclonal antibodies typically provide more consistent results compared to polyclonal antibodies, with HeLa cells and mouse brain tissue serving as reliable positive controls for validation experiments .

How can I optimize immunohistochemical detection of CKB in different tissue types?

Immunohistochemical detection of CKB requires tissue-specific optimization strategies:

Neural Tissue (Brain, Spinal Cord):

  • Fixation: 4% paraformaldehyde for 24-48 hours

  • Antigen retrieval: Citrate buffer (pH 6.0) heat-induced epitope retrieval, 20 minutes

  • Primary antibody: 1:50 to 1:200 dilution, overnight incubation at 4°C

  • Detection system: Polymer-based detection with DAB chromogen

Muscle Tissue:

  • Fixation: 10% neutral buffered formalin, 24 hours maximum

  • Antigen retrieval: Tris-EDTA buffer (pH 9.0), pressure cooker method, 3 minutes

  • Primary antibody: 1:100 dilution, 60 minutes at room temperature

  • Detection system: Amplification-based systems recommended for higher sensitivity

Adipose Tissue:

  • Fixation: 4% paraformaldehyde, 12-24 hours

  • Sectioning: 5-8 μm thickness optimal

  • Blocking: 3% hydrogen peroxide followed by 5% normal goat serum

  • Primary antibody incubation: 1:50 dilution, overnight at 4°C

Research indicates that using positive control tissues with known high CKB expression (e.g., brain tissue) alongside experimental samples provides crucial validation of staining protocols. Studies have also shown that CKB expression patterns can vary dramatically between tissue types, with some antibodies performing differently in various tissues despite similar sample preparation techniques .

What strategies can improve the reproducibility of CKB1 antibody-based assays?

Enhancing reproducibility in CKB1 antibody-based assays requires systematic approach to method standardization:

  • Antibody Validation and Selection:

    • Validate each antibody lot against positive controls

    • Document epitope information and clone/catalog numbers

    • Consider using monoclonal antibodies for higher consistency between lots

  • Protocol Standardization:

    • Implement detailed standard operating procedures (SOPs)

    • Document all critical reagents, including buffer compositions and incubation times

    • Utilize automated systems where possible to reduce operator variability

  • Quality Control Measures:

    • Include positive and negative controls in every experiment

    • Implement quantitative standards for calibration

    • Document image acquisition settings for microscopy-based methods

  • Data Analysis Standardization:

    • Use consistent quantification methods

    • Implement blinded analysis when possible

    • Report all normalization procedures in detail

Research has demonstrated that implementing these strategies can significantly reduce inter-assay variability. For example, studies using standardized radioimmunoassay protocols reported between-assay precision of 14-15% at clinically relevant CKB concentrations, while studies without standardized protocols showed much higher variability . Similarly, immunochemiluminometric assays showed excellent correlation (r = 0.94) with established methods when rigorous standardization was applied .

How can CKB1 antibodies be utilized to study the role of CKB in neurodegenerative disorders?

CKB1 antibodies offer powerful tools for investigating neurodegeneration mechanisms:

Research Applications:

  • Dysregulation Mapping: Using IHC/IF with CKB1 antibodies to map expression changes in neurodegenerative disease tissues compared to healthy controls

  • Biomarker Development: Employing high-sensitivity immunoassays to detect CKB release following neural damage

  • Mechanistic Studies: Combining CKB detection with mitochondrial markers to investigate energy metabolism dysfunction

Methodological Approaches:

  • Multiple Time-Point Analysis: Serial sampling to track disease progression

  • Co-localization Studies: Combining CKB1 antibodies with markers for neuronal subtypes, astrocytes, and microglial cells

  • Functional Correlations: Relating CKB expression patterns to functional neuroimaging data

Research has revealed that CKB plays a critical role in brain energy homeostasis, with altered expression patterns observed in various neurodegenerative conditions. The enzyme's central function in phosphocreatine/creatine metabolism provides a critical buffer for ATP levels during periods of high energy demand, making it particularly relevant to neurons with high metabolic requirements .

What are the best practices for using CKB1 antibodies in multiplex immunoassays?

Multiplexing strategies for CKB1 antibodies require careful consideration of several factors:

Antibody Selection for Multiplexing:

  • Choose antibodies raised in different host species to enable simultaneous detection

  • Verify minimal cross-reactivity between detection systems

  • Confirm compatible working conditions (buffer composition, pH, additives)

Fluorescence-Based Multiplex Systems:

  • Select fluorophores with minimal spectral overlap

  • Implement appropriate compensation controls

  • Use sequential detection for same-species antibodies

Mass Cytometry/Imaging Mass Cytometry:

  • Metal-conjugated antibodies enable high-dimensional analysis

  • Validate each antibody-metal conjugate independently

  • Implement batch controls and normalization

Protocol Optimization:

  • Titrate antibody concentrations individually before combining

  • Determine optimal incubation sequence

  • Validate specificity in the multiplex context with appropriate controls

Studies have demonstrated successful multiplexing of CKB antibodies with markers of cellular compartments, allowing simultaneous evaluation of expression and localization. Particularly valuable combinations include CKB with mitochondrial markers to study the enzyme's role in energy metabolism and thermogenesis .

How can CKB1 antibodies contribute to research on muscle disorders and heart disease?

CKB1 antibodies provide valuable insights into muscle and cardiac pathophysiology:

Experimental Applications:

  • Differential Isoform Analysis: Using isoform-specific antibodies to study the shift between CK isoenzymes during disease progression

  • Tissue Remodeling Studies: Tracking CKB expression changes during cardiac hypertrophy and heart failure

  • Biomarker Validation: Correlating tissue CKB levels with circulating biomarkers

Methodological Considerations:

  • Use standardized sampling locations due to heterogeneous expression across cardiac tissues

  • Implement careful normalization strategies for comparative studies

  • Consider specialized fixation protocols to preserve enzyme activity alongside antigenicity

Research Findings:
The dynamics of CK isoenzymes during cardiac disease progression provide important insights into pathophysiology. Research has established that while CK-MB is the predominant cardiac isoform, CKB upregulation occurs during heart failure and represents a return to a more fetal phenotype. Sensitive immunochemiluminometric assays have enabled detection of subtle changes in CKB expression that correlate with disease progression .

How are advanced antibody engineering techniques improving CKB1 antibody performance?

Recent advances in antibody engineering are enhancing CKB1 antibody capabilities:

Structural Improvements:

  • Enhanced CH1-CK heterodimerization through structure-guided design

  • Optimization of linker sequences between functional domains

  • Introduction of stabilizing mutations in the Fc region

Functional Enhancements:

  • Improved pharmacokinetic profiles through FcRn-binding modifications

  • Enhanced tissue penetration capabilities for in vivo applications

  • Reduced immunogenicity for therapeutic applications

Research has demonstrated that these engineering approaches can significantly enhance antibody performance. For example, structure-guided design combined with phage-display library technologies has successfully increased the stability of antibody scaffolds. Additionally, shortening polypeptide linkers or replacing them with human IgG1 hinge sequences has improved resistance to proteolysis, while specific amino acid mutations in the Fc region have enhanced binding to the neonatal Fc receptor (FcRn) and prolonged half-lives in vivo .

What emerging detection platforms are revolutionizing CKB antibody applications?

Novel detection technologies are expanding the capabilities of CKB1 antibody applications:

Advanced Imaging Technologies:

  • Super-resolution microscopy enabling subcellular localization studies

  • Expansion microscopy for enhanced spatial resolution

  • Light-sheet microscopy for 3D tissue analysis

High-Throughput Screening Platforms:

  • Automated IF/IHC systems for standardized analysis

  • Tissue microarray approaches for comparative studies

  • Cell painting assays for phenotypic profiling

Next-Generation Immunoassays:

  • Single-molecule detection methods for ultra-sensitive quantification

  • Digital ELISA platforms with femtomolar sensitivity

  • Microfluidic immunoassays for minimal sample consumption

Research indicates that these technologies are enabling unprecedented insights into CKB biology. For example, the development of highly sensitive chemiluminescent/magnetic separation assays has pushed detection limits down to 1 μg/L, enabling detection of subtle changes in CKB expression that would be missed by conventional methods . Similarly, advances in multiplexed imaging technologies are facilitating comprehensive analysis of CKB expression in relation to other markers of cellular function and disease progression .

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