CYP26B1 Antibody

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Description

What Is CYP26B1 Antibody?

CYP26B1 antibodies are immunoreagents designed to bind specifically to the CYP26B1 protein, a member of the cytochrome P450 superfamily. CYP26B1 catalyzes the oxidation of all-trans-retinoic acid (atRA) into hydroxylated metabolites (e.g., 4-OH-RA, 18-OH-RA), thereby controlling RA bioavailability . These antibodies are widely used in techniques such as:

  • Western blotting (WB)

  • Immunohistochemistry (IHC)

  • Immunofluorescence (IF/ICC)

  • Immunoprecipitation (IP) .

CYP26B1 antibodies are critical for elucidating the enzyme's tissue distribution, dysregulation in diseases like cancer, and roles in embryonic development .

Role in Development and Disease

  • Embryogenesis: CYP26B1 is enriched in endothelial cells (ECs) during lung and kidney development. Knockout studies in mice reveal its necessity for alveolar formation and distal airway maturation .

  • Cancer:

    • Colorectal Cancer: CYP26B1 is overexpressed in 25.2% of primary tumors and linked to poor prognosis (HR = 1.24, p = 0.002) .

    • Therapeutic Target: Inhibition of CYP26B1 enhances RA-mediated anti-proliferative effects in neuroblastoma cells, suggesting therapeutic potential .

  • Immunology: CYP26B1 regulates RA-dependent T-cell homing to gut-associated lymphoid tissues by modulating CCR9 expression .

Technical Insights

  • Tissue Staining: In human tissues, CYP26B1 localizes to the cytoplasm, with elevated expression in colorectal cancer compared to normal mucosa (p < 0.001) .

  • Knockdown Models: siRNA-mediated CYP26B1 suppression increases RA-induced Ccr9 expression in T cells, confirming its role in RA catabolism .

Clinical and Prognostic Significance

  • Biomarker Potential: Strong CYP26B1 expression independently predicts poorer survival in colorectal cancer (multivariate HR = 1.18, p = 0.026) .

  • Therapeutic Inhibition: Co-treatment with CYP26 inhibitors (e.g., talarozole) potentiates RA’s anti-cancer effects, highlighting CYP26B1 as a drug target .

Challenges and Future Directions

  • Isoform Specificity: Current inhibitors primarily target CYP26A1; selective CYP26B1 inhibitors remain underdeveloped .

  • Mechanistic Studies: Further research is needed to disentangle RA-dependent and independent roles of CYP26B1 in development and disease .

Product Specs

Buffer
PBS with 0.02% Sodium Azide, 50% Glycerol, pH 7.3. Store at -20°C. Avoid freeze / thaw cycles.
Lead Time
Typically, we can ship your orders within 1-3 business days of receiving them. Delivery times may vary depending on the purchasing method and location. Please consult your local distributors for specific delivery timeframes.
Synonyms
CP26 antibody; CP26B_HUMAN antibody; CYP26A2 antibody; cyp26b1 antibody; Cytochrome P450 26A2 antibody; Cytochrome P450 26B1 antibody; Cytochrome P450 family 26 subfamily B polypeptide 1 antibody; Cytochrome P450 retinoic acid-inactivating 2 antibody; Cytochrome P450 retinoid metabolizing protein antibody; Cytochrome P450 subfamily XXVIA; polypeptide 2 antibody; Cytochrome P450 subfamily XXVIB polypeptide 1 antibody; Cytochrome P450RAI-2 antibody; DKFZp686G0638 antibody; dol antibody; EC 1.14. antibody; fc21d03 antibody; MGC129613 antibody; P450 26A2 antibody; P450 retinoic acid inactivating 2 antibody; P450RAI 2 antibody; P450RAI2 antibody; Retinoic acid metabolizing cytochrome antibody; Retinoic acid-metabolizing cytochrome antibody; RHFCA antibody; stocksteif antibody; wu:fc21d03 antibody; wu:fc26h10 antibody; zgc:76999 antibody
Target Names
CYP26B1
Uniprot No.

Target Background

Function
CYP26B1 is an enzyme involved in the metabolism of retinoic acid (RA), rendering this classical morphogen inactive through oxidation. It plays a crucial role in the specific inactivation of all-trans-retinoic acid (all-trans-RA), with a preference for the following substrates: all-trans-RA > 9-cis-RA > 13-cis-RA. CYP26B1 generates several hydroxylated forms of RA, including 4-OH-RA, 4-oxo-RA, and 18-OH-RA. It catalyzes the hydroxylation of carbon hydrogen bonds of atRA primarily at C-4. CYP26B1 is essential for postnatal survival and plays a central role in germ cell development. By degrading RA in the developing testis, CYP26B1 prevents STRA8 expression, leading to a delay of meiosis. This enzyme is required for the maintenance of the undifferentiated state of male germ cells during embryonic development in Sertoli cells, inducing arrest in the G0 phase of the cell cycle and preventing meiotic entry. CYP26B1 also plays a role in skeletal development, both at the level of patterning and in the ossification of bone and the establishment of some synovial joints. Additionally, CYP26B1 exhibits significant activity in the oxidation of tazarotenic acid, suggesting a potential role in metabolizing this xenobiotic in vivo.
Gene References Into Functions
Related Research:
  1. This study reports the third family affected by CYP26B1 deficiency and the first affected individual to survive beyond infancy. The individual, homozygous for the c.1303G>A; p.(Gly435Ser) mutation in CYP26B1, exhibited multisutural synostosis, radiohumeral synostosis, normal bone mineral density, and apparent intellectual disability. This phenotype shares significant similarities to Antley-Bixler and Pfeiffer syndromes. PMID: 27410456
  2. The study investigated the distribution of Cyp26a1 and Cyp26b1 transcripts in the rat and human brain, identifying several novel regions of expression, including the cerebral cortex for both enzymes and striatum for Cyp26b1. PMID: 26374207
  3. Holo-CRABPs displayed higher affinity for CYP26B1 than free atRA, while both apo-CRABPs (CRABP-I and CRABP-II) inhibited the formation of 4-OH-RA by CYP26B1. PMID: 27416800
  4. Increased expression of CYP26B1 mRNA was observed in oral cancer tissue compared to adjacent noncancerous tissues. PMID: 25839051
  5. The findings suggest that the CYP26B1 splice variant is associated with the occurrence of betel quid-related oral cancer. PMID: 25114974
  6. Homozygous carriers of the major (T) allele, relative to homozygous carriers of the minor (C) allele, of the CYP26B1 polymorphism rs2241057 may have an increased risk for the development of Crohn's disease. PMID: 23977348
  7. CYP26B1 inhibits fibroblasts-induced activation of mast cells and dermatitis. PMID: 24726878
  8. This study reports a 2p13.2 microdeletion in 2 subjects encompassing 2 genes, EXOC6B and CYP26B12, with clinical effects on cognitive function, and craniofacial and skeletal development. PMID: 23837398
  9. Single nucleotide polymorphisms in CYP26B1, NANOS1 and STRA8 genes support the involvement of meiotic program initiation genes in modifying the risk of azoospermia and oligozoospermia in a Han-Chinese population. PMID: 23320086
  10. CYP26B1 capacity is genetically regulated and suggests that local CYP26B1 activity may influence atherosclerosis. PMID: 22415012
  11. Vascular cells express the spliced variant of CYP26B1 lacking exon 2, which is also increased in atherosclerotic lesions. PMID: 22666329
  12. Detection of the methylation prevalence of KCNA4 and CYP26B1 together in serum demonstrated good sensitivity and specificity in gastric cancer. PMID: 21945024
  13. Human null and hypomorphic mutations were identified in the gene encoding the retinoic acid degrading enzyme CYP26B1, leading to skeletal and craniofacial anomalies, including fusions of long bones, calvarial bone hypoplasia, and craniosynostosis. PMID: 22019272
  14. The mRNA expression of CYP26A1 and CYP26B1 correlated between human tissues, except for human cerebellum, where CYP26B1 was the predominant CYP26, and liver, where CYP26A1 dominated. PMID: 22020119
  15. The presence of CYP26B1 in normal lung development (A549 cell line), and the capacity to convert retinol to retinoic acid, indicates that fetal human lung has the ability to regulate the supply of vitamin A from the pseudoglandular stage. PMID: 21482329
  16. Increased expression of the CYP26B1 gene was observed in tumor tissue compared with adjacent normal tissue, suggesting a novel role in the betel-dependent pathogenesis of oral squamous cell carcinoma. PMID: 21641851
  17. This study investigated the role of CYP26 in the regulation of all-trans retinoic acid levels in human aortic smooth muscle cells. PMID: 20606468
  18. The predominant expression of CYP26A1 in the liver is consistent with previous reports on tissue distribution of CYP26 mRNA in adult humans. PMID: 19884280
  19. Mouse studies revealed that regulation of retinoid levels, influenced by the retinoid-degrading enzyme CYP26B1, during fetal gonad development determines whether germ cells will become oocytes or spermatogonia. PMID: 16574820
  20. CYP26B1 mRNA levels were approximately twice the level in adult cerebellum compared to adult whole brain samples. CYP26B1 levels were 10x higher in earlier gestational times than in later gestational times. PMID: 12101034
  21. Mouse studies identified different expression patterns of the retinoic acid-metabolizing enzymes CYP26A1 and CYP26B1 during development. PMID: 11744378

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Database Links

HGNC: 20581

OMIM: 605207

KEGG: hsa:56603

STRING: 9606.ENSP00000001146

UniGene: Hs.91546

Involvement In Disease
Radiohumeral fusions with other skeletal and craniofacial anomalies (RHFCA)
Protein Families
Cytochrome P450 family
Subcellular Location
Endoplasmic reticulum membrane; Peripheral membrane protein. Microsome membrane; Peripheral membrane protein.
Tissue Specificity
Highly expressed in brain, particularly in the cerebellum and pons.

Q&A

Basic Research Questions About CYP26B1 Antibodies

This section covers fundamental questions that researchers commonly encounter when beginning work with CYP26B1 antibodies. These questions address core concepts about the protein target, antibody selection criteria, and standard experimental applications that provide the foundation for more advanced research endeavors.

What is CYP26B1 and why is it important in biological research?

CYP26B1 is a member of the cytochrome P450 family 26, functioning primarily as a retinoic acid (RA)-metabolizing enzyme that regulates RA availability in tissues. The protein is approximately 57.5 kilodaltons in mass and may also be known by alternative names including CYP26A2, P450RAI-2, P450RAI2, RHFCA, cytochrome P450 26B1, and cytochrome P450 family 26 subfamily A member 1 . CYP26B1 plays critical roles in T-cell homing through its regulation of RA-dependent signals, as evidenced by its selective expression in antigen-experienced CD44+ T cells within gut-related lymphoid organs but not in the spleen or skin-draining lymph nodes . Additionally, CYP26B1 is essential for proper lung development, with knockout studies demonstrating that loss of Cyp26b1 leads to reduction of alveolar type 1 cells, failure of alveolar inflation, and early postnatal lethality in mice . The enzyme's involvement in vitamin A metabolism has also implicated it in inflammatory bowel disease pathogenesis, particularly Crohn's disease, where polymorphisms in the CYP26B1 gene correlate with disease susceptibility .

What types of CYP26B1 antibodies are commercially available and how should I select one for my research?

CYP26B1 antibodies are offered by numerous suppliers in various formats to accommodate different experimental needs. The commercial landscape includes over 211 CYP26B1 antibodies from 22 different suppliers, providing researchers with multiple options regarding antibody type, reactivity, and application compatibility . When selecting a CYP26B1 antibody, researchers should first consider the experimental application, with available antibodies validated for Western blotting (WB), immunohistochemistry (IHC), enzyme-linked immunosorbent assay (ELISA), and immunofluorescence (IF) . Species reactivity is another crucial selection criterion, with antibodies available that recognize human, mouse, rat, and even zebrafish CYP26B1 orthologs . For studies requiring high specificity, monoclonal antibodies like the "Recombinant Mouse anti-Human CYP26B1 Monoclonal antibody" may be preferable, while polyclonal antibodies may offer advantages for detecting lower abundance targets or when epitope accessibility is a concern . Additionally, researchers should evaluate the immunogen information, which typically targets specific regions of the protein (e.g., "CYP26B1 Antibody - middle region"), to ensure compatibility with their specific research questions .

What are the most common applications for CYP26B1 antibodies in basic research?

CYP26B1 antibodies are employed across multiple experimental techniques to investigate protein expression, localization, and function. Western blotting represents one of the most frequently validated applications, allowing researchers to detect and quantify CYP26B1 protein levels in tissue or cell lysates . Immunohistochemistry and immunofluorescence applications enable visualization of CYP26B1 expression patterns within tissues, which has been particularly valuable in studies examining CYP26B1 distribution in gut-associated lymphoid tissues and developing lungs . ELISA techniques provide quantitative measurement of CYP26B1 in various sample types, offering high sensitivity for protein detection . In functional studies, CYP26B1 antibodies have been used for immunoprecipitation to investigate protein interactions, while knockdown validation experiments employ these antibodies to confirm successful siRNA-mediated reduction of CYP26B1 expression, as demonstrated in studies examining the relationship between CYP26B1 and CCR9 expression in T cells . Additionally, CYP26B1 antibodies serve as critical tools in GFP-fusion protein detection, exemplified by their use in Western blot analysis of CYP26B1-GFP fusion proteins to confirm successful transfection and expression in experimental systems .

How can I validate the specificity of a CYP26B1 antibody for my experiments?

Validating CYP26B1 antibody specificity is essential for generating reliable research results and can be accomplished through several complementary approaches. A fundamental validation method involves comparing antibody reactivity between wildtype tissues/cells and those with confirmed CYP26B1 knockout or knockdown, such as the Cyp26b1-/- mouse model described in the literature . Western blot analysis should reveal a specific band at the expected molecular weight of approximately 57.5 kDa in wildtype samples that is absent or significantly reduced in knockout/knockdown samples . For transfection studies, researchers can employ positive controls by creating CYP26B1-GFP fusion constructs and validating antibody detection against this tagged protein, as demonstrated in T cell studies where anti-GFP antibodies confirmed successful expression of the fusion protein before CYP26B1 antibody validation . Peptide competition assays, wherein the antibody is pre-incubated with the immunizing peptide before application to samples, can further confirm specificity, as signal abolishment indicates specific binding to the target epitope. Finally, cross-validation using multiple antibodies targeting different CYP26B1 epitopes can provide additional confidence in specificity, particularly when consistent expression patterns are observed across different detection reagents .

What are the optimal sample preparation methods for detecting CYP26B1 in different experimental systems?

Optimal sample preparation for CYP26B1 detection varies depending on the experimental system and application. For Western blot analysis of CYP26B1 in cell culture systems, cells should be lysed in RIPA buffer supplemented with protease inhibitors to prevent degradation of the 57.5 kDa protein . When working with tissue samples, particularly from gut-associated lymphoid tissues or lung specimens, flash-freezing followed by homogenization in ice-cold lysis buffer generally preserves protein integrity better than formalin fixation for subsequent Western blot applications . For immunohistochemistry and immunofluorescence, paraformaldehyde fixation (typically 4%) followed by careful antigen retrieval is crucial, as CYP26B1 epitopes may be masked during the fixation process; this approach has been successful in visualizing differential expression of CYP26B1 in alveolar cells of developing lungs . For flow cytometry applications, gentle cell dissociation methods should be employed to maintain membrane integrity, particularly when examining CYP26B1 in T cell populations from gut-associated lymphoid tissues . When analyzing CYP26B1 in transfection experiments, harvesting cells 48-72 hours post-transfection appears optimal, as CYP26B1 expression reaches peak levels within this timeframe, as observed in studies examining retinoic acid-induced CYP26B1 expression in T cells .

Advanced Research Applications and Methodological Considerations

This section addresses more complex research scenarios and methodological approaches for researchers with established experience working with CYP26B1 antibodies. These questions explore advanced experimental design, data interpretation challenges, and specialized applications that build upon fundamental knowledge of the target and detection systems.

How can CYP26B1 antibodies be utilized to investigate retinoic acid signaling pathways in T cells?

CYP26B1 antibodies serve as powerful tools for elucidating retinoic acid (RA) metabolism and signaling in T cell biology through multiple sophisticated approaches. Immunofluorescence microscopy using validated CYP26B1 antibodies has revealed that CD44+ effector/memory T cells in gut-related lymphoid organs selectively express CYP26B1, while this expression is notably absent in T cells from the spleen or skin-draining lymph nodes . For investigating dynamic regulation, researchers can employ time-course experiments with Western blot analysis to track CYP26B1 protein expression in naïve T cells following RA treatment, which reveals that CYP26B1 becomes detectable after 48 hours of stimulation, peaks at approximately 72 hours, and subsequently decreases—a pattern that provides insight into the temporal control of RA metabolism . Co-immunoprecipitation studies using CYP26B1 antibodies combined with antibodies against potential interacting partners can identify protein complexes involved in RA signaling networks within T cells. Advanced functional investigations can pair CYP26B1 detection with CCR9 expression analysis, as overexpression of CYP26B1 significantly suppresses RA-induced CCR9 expression on T cells, while CYP26B1 knockdown enhances this expression, demonstrating the inverse relationship between CYP26B1 activity and RA-dependent gut-homing receptor expression .

What are the methodological considerations when using CYP26B1 antibodies for studying developmental processes in knockout models?

When employing CYP26B1 antibodies to study developmental processes in knockout models, researchers must implement several specialized methodological considerations to generate reliable and interpretable data. For studying embryonic or early postnatal phenotypes, as seen in Cyp26b1-/- models that exhibit early postnatal lethality, timed embryonic collections with precise developmental staging are critical for meaningful comparisons between wildtype and knockout tissues . Dual-immunofluorescence approaches combining CYP26B1 antibodies with developmental markers (such as HOPX, podoplanin, and aquaporin 5 for alveolar type 1 cells, or pro-surfactant protein C for alveolar type 2 cells) enable comprehensive assessment of cell-specific impacts of CYP26B1 deletion . Quantitative analysis should include standardization for cell density, as Cyp26b1-/- lungs contain altered proportions of cell types per given area, requiring normalization to total DAPI-positive nuclei for accurate interpretation . When working with CRISPR-generated knockout models, researchers should address potential off-target effects by using compound heterozygotes created from independently derived null alleles, ensuring that observed phenotypes can be fully attributed to loss of CYP26B1 rather than to off-target CRISPR lesions . Additionally, developmental studies benefit from three-dimensional imaging approaches such as optical clearing combined with whole-mount immunofluorescence using CYP26B1 antibodies to visualize spatial patterns of expression across entire developing organs.

How can multiplexed approaches with CYP26B1 antibodies enhance understanding of tissue-specific retinoic acid metabolism?

Multiplexed detection approaches incorporating CYP26B1 antibodies significantly expand our understanding of tissue-specific retinoic acid metabolism by revealing complex cellular relationships and regulatory networks. Multi-color immunofluorescence protocols combining antibodies against CYP26B1 with other RA-metabolizing enzymes (such as RALDH1/2) and RA receptors (RARs/RXRs) can map the complete RA signaling landscape within tissues, revealing spatial relationships between RA-producing and RA-degrading cells . Mass cytometry (CyTOF) utilizing metal-conjugated CYP26B1 antibodies enables simultaneous detection of dozens of markers alongside CYP26B1, allowing high-dimensional characterization of cell populations with distinct RA metabolic profiles, particularly valuable for heterogeneous tissues like gut-associated lymphoid organs . Proximity ligation assays (PLA) combining CYP26B1 antibodies with antibodies against potential interacting proteins can identify molecular complexes involved in RA metabolism with subcellular resolution, providing insight into the spatial organization of RA catabolic machinery. For translational research, multiplexed immunohistochemistry on tissue microarrays can evaluate CYP26B1 expression across multiple patient samples simultaneously, especially valuable when investigating connections between CYP26B1 polymorphisms and disease states like Crohn's disease . Additionally, combining CYP26B1 detection with lineage tracing approaches in developmental studies can reveal how progenitor cells with different CYP26B1 expression levels contribute to adult tissue organization and function, as implicated in lung development studies .

What strategies can address epitope masking issues when detecting CYP26B1 in fixed tissues?

Epitope masking represents a significant challenge when detecting CYP26B1 in fixed tissues, but several specialized strategies can enhance antibody accessibility and signal detection. Optimized antigen retrieval protocols are essential, with heat-induced epitope retrieval (HIER) using citrate buffer (pH 6.0) often proving effective for CYP26B1 detection in formalin-fixed tissues, particularly in lung sections where proper detection of CYP26B1 is critical for assessing alveolar development . For tissues with dense extracellular matrix or high lipid content that may interfere with antibody penetration, enzymatic retrieval approaches using proteinase K or trypsin can supplement heat-based methods to improve accessibility to CYP26B1 epitopes. Signal amplification technologies such as tyramide signal amplification (TSA) can significantly enhance detection sensitivity for low-abundance CYP26B1 expression, which is particularly valuable when examining subtle expression differences in heterogeneous tissues like gut-associated lymphoid organs . Alternative fixation protocols, such as using periodate-lysine-paraformaldehyde (PLP) instead of standard formalin, may better preserve CYP26B1 epitope accessibility while maintaining adequate tissue morphology. For particularly challenging samples, researchers can employ unmask-and-stain sequential immunofluorescence protocols, where tissues undergo multiple rounds of antibody stripping and restaining to maximize the detection of masked epitopes while building a comprehensive picture of CYP26B1 expression in relation to other markers.

How can CYP26B1 antibodies be employed to investigate the functional implications of CYP26B1 polymorphisms?

CYP26B1 antibodies provide valuable tools for elucidating the functional consequences of CYP26B1 polymorphisms through several sophisticated experimental approaches. Quantitative immunoblotting can assess whether polymorphisms like rs2241057 affect CYP26B1 protein levels in patient-derived samples, potentially correlating expression differences with disease susceptibility as observed in Crohn's disease patients . Immunoprecipitation of CYP26B1 followed by activity assays can determine whether polymorphic variants exhibit altered catalytic efficiency toward retinoic acid substrates, directly addressing whether polymorphisms like rs2241057 truly confer "elevated catabolic function" as hypothesized . Site-directed mutagenesis to create expression constructs mimicking natural polymorphisms, followed by transfection and antibody-based detection, allows researchers to isolate the effects of specific genetic variants on protein expression, stability, and localization in controlled cellular environments. For mechanistic studies, chromatin immunoprecipitation (ChIP) experiments combining CYP26B1 antibodies with antibodies against transcription factors can reveal whether polymorphisms affect protein-DNA interactions that regulate CYP26B1 expression. Additionally, immunofluorescence approaches in patient-derived cells can determine whether polymorphisms alter the subcellular localization of CYP26B1, potentially affecting its accessibility to retinoic acid substrates or interaction with metabolic partners, which could contribute to disease mechanisms in conditions like inflammatory bowel disease .

Data Interpretation and Experimental Troubleshooting

This section addresses challenges researchers commonly face when interpreting CYP26B1 antibody data and provides guidance for troubleshooting experimental issues. These questions focus on resolving technical difficulties, analyzing complex results, and ensuring experimental validity across different research contexts.

How should researchers interpret discrepancies between CYP26B1 mRNA and protein expression data?

Discrepancies between CYP26B1 mRNA and protein expression data require careful consideration of multiple biological and technical factors for proper interpretation. Post-transcriptional regulation may significantly influence CYP26B1 protein levels independent of mRNA abundance, as studies in T cells have demonstrated temporal differences between mRNA induction and detectable protein expression following retinoic acid stimulation, with protein expression becoming detectable only after 48 hours despite earlier mRNA changes . Protein stability differences between experimental conditions could create apparent discrepancies, as the half-life of CYP26B1 protein may vary depending on cellular context, activation state, or presence of retinoic acid, which acts as both inducer and substrate. Technical considerations include antibody sensitivity thresholds, as Western blotting may not detect very low levels of CYP26B1 protein that nonetheless correspond to detectable mRNA by sensitive PCR methods, particularly relevant when comparing expression across different tissue types like gut-associated lymphoid tissues versus peripheral lymphoid tissues . Antibody specificity for post-translationally modified forms of CYP26B1 may also contribute to discrepancies if modifications affect epitope recognition but not mRNA quantification. For accurate interpretation, researchers should implement integrated approaches combining qRT-PCR, Western blotting, and functional assays across multiple timepoints, while considering the kinetic relationship between transcription, translation, and protein turnover specific to CYP26B1 regulation in their experimental system.

What are the common sources of false positives/negatives in CYP26B1 antibody-based experiments and how can they be mitigated?

False results in CYP26B1 antibody-based experiments can stem from multiple sources but can be mitigated through systematic validation and control strategies. Cross-reactivity with other CYP26 family members (CYP26A1, CYP26C1) represents a significant source of false positives, which can be addressed by verifying antibody specificity using samples from Cyp26b1 knockout models and by comparing expression patterns with the known tissue-specific distribution of CYP26B1 versus other family members (e.g., the selective expression of Cyp26b1 but not Cyp26a1 or Cyp26c1 in gut-associated lymphoid tissues) . Non-specific binding to highly abundant proteins with similar molecular weights may generate false positive bands in Western blots, requiring confirmation through immunoprecipitation followed by mass spectrometry to verify protein identity. False negatives commonly occur due to epitope masking during fixation or processing, particularly in densely packed tissues, which can be mitigated through optimization of antigen retrieval methods and fixation protocols as discussed earlier for different tissue types . Sample degradation may result in false negatives, preventable through proper handling with protease inhibitors and optimized extraction buffers based on the cellular source of CYP26B1. For flow cytometry applications, autofluorescence from retinoid-processing cells can create false positives, addressable through proper compensation controls and selection of fluorophores with emission spectra distinct from cellular autofluorescence ranges.

What quantitative approaches are recommended for analyzing CYP26B1 expression in heterogeneous tissue samples?

Quantitative analysis of CYP26B1 expression in heterogeneous tissues requires specialized approaches that account for cellular diversity and spatial organization. Single-cell Western blotting techniques, though technically challenging, can quantify CYP26B1 expression in individual cells sorted from heterogeneous tissues, enabling precise measurement of protein expression variation among different cell populations within complex organs . Laser capture microdissection combined with subsequent immunoblotting allows researchers to isolate specific regions of interest (such as particular zones within lymphoid tissues or developing lung segments) before quantifying CYP26B1 levels, preserving spatial information while enabling protein quantification . Digital pathology approaches using whole-slide scanning of immunohistochemistry or immunofluorescence preparations, followed by machine learning-based image analysis, can quantify CYP26B1-positive cells within defined tissue compartments while simultaneously assessing morphological features and co-expression with other markers. For flow cytometry-based quantification, multiparameter panels incorporating CYP26B1 alongside lineage markers enable enumeration of CYP26B1 expression across discrete cell populations, particularly valuable for analyzing lymphoid tissues where CYP26B1 shows cell type-specific expression patterns . When comparing diseased and healthy tissues, normalization strategies should account for alterations in cellular composition, as demonstrated in studies of Cyp26b1-/- lungs where standardization for increased number of DAPI+ cells per given area was necessary for accurate interpretation of AT1 cell proportion changes .

How should CYP26B1 antibody-based results be validated in the context of CYP26B1 knockdown or inhibition studies?

Validating CYP26B1 antibody results in knockdown or inhibition studies requires multilevel confirmation approaches to establish specificity and functional relevance. When using siRNA-mediated knockdown, as demonstrated in T cell studies, Western blot validation using CYP26B1 antibodies should confirm protein reduction, ideally with quantification showing at least 70-80% decrease in expression compared to control siRNA treatments . Rescue experiments where knockdown phenotypes are reversed by expressing siRNA-resistant CYP26B1 constructs provide strong validation that observed effects specifically result from CYP26B1 reduction rather than off-target effects. For pharmacological inhibition studies using compounds like ketoconazole that inhibit CYP26 enzymatic activity, validation should include measurement of retinoic acid metabolites to confirm reduced catalytic function while demonstrating unchanged CYP26B1 protein levels by immunoblotting, distinguishing between effects on protein expression versus enzymatic activity . Functional validation through measurement of downstream targets, such as CCR9 expression in T cells, can confirm the biological consequences of CYP26B1 manipulation, as studies have shown that both siRNA-mediated knockdown and pharmacological inhibition of CYP26B1 enhance retinoic acid-induced CCR9 expression . Additionally, dose-response studies with both inhibitors and siRNA can establish the quantitative relationship between CYP26B1 activity reduction and phenotypic outcomes, strengthening causal interpretations of experimental results.

What specific considerations apply when using CYP26B1 antibodies for comparative studies across different species?

Cross-species comparative studies using CYP26B1 antibodies require careful consideration of evolutionary conservation, epitope differences, and technical validation to ensure meaningful interpretations. Epitope sequence conservation analysis should precede experimental work, comparing the immunogen sequence used for antibody production against CYP26B1 sequences from target species (human, mouse, rat, etc.) to predict potential cross-reactivity; this is particularly important given that commercial antibodies show varied reactivity patterns across species, with some recognizing human, mouse, rat, and zebrafish orthologs, while others have more limited species coverage . Western blot validation using positive control samples from each species under investigation is essential, with species-specific positive controls ideally including recombinant CYP26B1 protein or lysates from cells overexpressing species-matched CYP26B1. Antibody dilution optimization should be performed independently for each species, as optimal working concentrations may differ substantially between human, mouse, rat, or other species samples due to variations in epitope affinity . Detection system compatibility should be confirmed, particularly when using species-specific secondary antibodies that might create background when the primary antibody species matches the sample species. For immunohistochemistry applications, tissue processing and antigen retrieval protocols may require species-specific optimization, as fixation effects on epitope accessibility can vary between tissues from different organisms even when the antibody theoretically cross-reacts .

Emerging Research Applications and Future Directions

This final section explores cutting-edge applications and future research directions for CYP26B1 antibodies in scientific investigation. These questions address innovative methodologies, emerging research areas, and potential translational applications that represent the frontier of CYP26B1 research.

How might single-cell approaches utilizing CYP26B1 antibodies advance our understanding of retinoic acid metabolism heterogeneity?

Single-cell technologies incorporating CYP26B1 antibodies offer unprecedented insights into cellular heterogeneity in retinoic acid metabolism across tissues and disease states. Single-cell CyTOF (mass cytometry) using metal-conjugated CYP26B1 antibodies enables high-dimensional phenotyping of individual cells based on their CYP26B1 expression in conjunction with dozens of other markers, revealing previously unrecognized cellular subsets with distinct retinoic acid metabolic profiles, particularly valuable for heterogeneous tissues like gut-associated lymphoid organs where CYP26B1 expression varies significantly between cell types . Imaging mass cytometry further adds spatial context to single-cell data, allowing researchers to visualize CYP26B1-expressing cells within their tissue microenvironment and identify spatial relationships with retinoic acid-producing or responding cells. Single-cell Western blotting technologies permit quantitative assessment of CYP26B1 protein levels in individual cells, enabling precise correlation between protein abundance and cellular phenotype beyond what is possible with conventional immunofluorescence intensity measurements. For developmental studies, CyTOF combined with "mass-tag cellular barcoding" can track CYP26B1 expression changes in rare cell populations across multiple timepoints during embryonic development, potentially revealing transient expression patterns critical for proper tissue formation, as implicated in lung development studies . Single-cell multi-omics approaches integrating protein detection with transcriptomics or epigenomics can correlate CYP26B1 protein expression with its transcriptional regulation and broader gene expression programs, providing systems-level insights into how retinoic acid metabolism integrates with cellular identity and function.

What are the potential applications of CYP26B1 antibodies in understanding disease mechanisms related to retinoic acid dysregulation?

CYP26B1 antibodies provide valuable tools for investigating disease mechanisms related to retinoic acid dysregulation across multiple pathological conditions. In inflammatory bowel disease, particularly Crohn's disease where CYP26B1 polymorphisms have been associated with disease risk, immunohistochemical mapping of CYP26B1 expression in patient biopsies can reveal altered distribution patterns that may contribute to inflammation through dysregulated retinoic acid availability . For developmental disorders resulting from retinoic acid signaling abnormalities, CYP26B1 immunodetection in affected tissues can identify specific cell populations with aberrant RA metabolism, as suggested by the severe developmental defects observed in Cyp26b1 knockout mice . In cancer biology, where retinoid signaling often becomes dysregulated, quantitative assessment of CYP26B1 expression in tumor versus normal tissues may reveal alterations that promote cancer cell survival or affect response to retinoid-based therapies. For autoimmune disorders involving T cell dysfunction, investigation of CYP26B1 expression in pathogenic versus regulatory T cell populations may uncover how differential retinoic acid metabolism contributes to immune dysregulation, building on findings of selective CYP26B1 expression in specific T cell subsets . In the context of respiratory diseases, the critical role of CYP26B1 in normal lung development suggests potential involvement in conditions affecting alveolar structure and function, warranting investigation of CYP26B1 expression patterns in diseases such as bronchopulmonary dysplasia or pulmonary fibrosis .

How can CRISPR-based genome editing be combined with CYP26B1 antibodies for mechanistic studies?

CRISPR-based genome editing technologies synergize with CYP26B1 antibodies to enable precise mechanistic studies of retinoic acid metabolism regulation. CRISPR knock-in of epitope tags (such as FLAG or HA) at the endogenous CYP26B1 locus creates fusion proteins detectable with highly specific commercial tag antibodies, circumventing potential specificity issues with direct CYP26B1 antibodies while maintaining physiological expression levels and regulation . CRISPR activation (CRISPRa) or interference (CRISPRi) systems targeting the CYP26B1 promoter, followed by antibody-based detection, allow researchers to modulate expression without complete gene deletion, enabling dose-dependent studies of CYP26B1 function in retinoic acid metabolism. For investigating polymorphism effects, CRISPR-mediated homology-directed repair can introduce specific variants (such as the rs2241057 polymorphism associated with Crohn's disease) into cellular models, with subsequent antibody-based detection assessing impacts on protein expression, stability, and localization . CRISPR screening approaches combined with CYP26B1 antibody-based readouts can identify novel regulators of CYP26B1 expression or stability, potentially revealing druggable targets for modulating retinoic acid metabolism in disease contexts. For developmental studies, CRISPR-based lineage tracing systems coupled with CYP26B1 immunodetection can track the fate of cells expressing CYP26B1 during specific developmental windows, providing insight into how transient expression affects terminal differentiation and tissue organization, as suggested by the alveolar development defects in Cyp26b1 knockout mice .

What novel imaging approaches can enhance the visualization of CYP26B1 in complex tissues?

Advanced imaging technologies significantly enhance visualization of CYP26B1 distribution and dynamics in complex tissues, revealing previously unappreciated aspects of retinoic acid metabolism. Expansion microscopy combined with CYP26B1 immunofluorescence physically expands samples to achieve super-resolution imaging using standard confocal microscopy, revealing subcellular localization of CYP26B1 in relation to other organelles involved in retinoid metabolism and signaling. Light-sheet fluorescence microscopy enables rapid three-dimensional imaging of cleared whole organs labeled with CYP26B1 antibodies, providing comprehensive spatial maps of expression across intact tissues while preserving delicate structures, particularly valuable for developmental studies of organs like the lung where CYP26B1 plays critical roles . For live imaging applications, fusion of CYP26B1 with fluorescent proteins followed by antibody-based validation can track dynamic changes in protein localization and expression in response to retinoic acid or other stimuli in real-time. Multiphoton intravital microscopy using fluorescently labeled CYP26B1 antibodies or their fragments allows direct visualization of CYP26B1-expressing cells in living tissues, potentially revealing dynamic regulation in physiological contexts like immune responses in gut-associated lymphoid tissues . Correlative light and electron microscopy (CLEM) combining CYP26B1 immunofluorescence with electron microscopy enables visualization of the enzyme at ultrastructural resolution, potentially revealing associations with specific subcellular compartments involved in retinoid processing or metabolism.

How might CYP26B1 antibodies contribute to the development of targeted therapeutics for conditions involving retinoic acid signaling dysregulation?

CYP26B1 antibodies can significantly advance therapeutic development for conditions involving retinoic acid signaling dysregulation through multiple innovative approaches. Target validation studies using CYP26B1 antibodies for immunohistochemistry in patient tissues can confirm disease-specific expression patterns, guiding the development of CYP26B1 inhibitors for conditions where excessive retinoic acid catabolism contributes to pathology, as suggested in certain inflammatory or fibrotic disorders . Antibody-drug conjugates (ADCs) using CYP26B1 antibodies could potentially deliver therapeutic payloads specifically to cells with high CYP26B1 expression, offering targeted intervention in conditions where these cells contribute to disease pathogenesis. For high-throughput screening of CYP26B1 inhibitors, antibody-based assays can measure compound effects on protein levels or post-translational modifications, complementing activity-based screens to identify molecules that modulate CYP26B1 through various mechanisms. Pharmacodynamic biomarker development using CYP26B1 antibodies in clinical trials can evaluate whether experimental therapeutics successfully engage their intended targets, providing crucial evidence of mechanism for drugs designed to modulate retinoic acid signaling. In precision medicine approaches, immunohistochemical assessment of CYP26B1 expression in patient samples could potentially stratify individuals based on likely response to retinoid-based therapies or CYP26B1 inhibitors, particularly relevant for inflammatory bowel disease patients with different CYP26B1 polymorphism profiles, where personalized retinoid dosing might optimize treatment outcomes .

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