D1 Antibody

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Description

DGanglioside Antibody

This monoclonal antibody targets a cell surface ganglioside marker (D1.1 antigen) expressed on neuroepithelial germinal cells. Key findings include:

  • Localization: Specifically labels germinal cells in the external granule layer (EGL) of the developing rat cerebellum, appearing at embryonic day 18 and persisting through postnatal cerebellar development .

  • Function: Serves as a transient marker for proliferating cells, disappearing 48 hours after mitosis as cells mature .

  • Biochemical Properties: Recognizes a ganglioside with thin-layer chromatographic mobility between GM1 and GM2 .

FeatureDetail
TargetGanglioside antigen (D1.1)
Expression WindowEmbryonic day 18 to postnatal maturation
Research ApplicationsTracking neurogenesis, cell maturation

Anti-Protein Kinase D1 (PRKD1) Antibody

These antibodies detect the serine/threonine-protein kinase D1, encoded by the PRKD1 gene. Critical insights include:

  • Role in Disease: Implicated in congenital heart defects, ectodermal dysplasia, and cancer pathways .

  • Cellular Localization: Primarily found in the cell membrane, Golgi apparatus, and cytoplasm .

  • Technical Specifications:

    • Mass: 101.7 kDa

    • Post-translational modifications: Phosphorylation-dependent activation .

Over 320 published studies utilize these antibodies for Western blot, ELISA, and immunohistochemistry .

Anti-Cyclin D1 Antibodies

Cyclin D1 (CCND1) antibodies, such as clone RM241 (Bio-Rad) and #2922 (Cell Signaling Technology), are pivotal in cancer research:

  • Function: Drives G1/S phase transition by binding CDK4/6 .

  • Clinical Relevance: Overexpressed in 50% of breast cancers, linked to unchecked cell proliferation .

  • Validation Data:

Antibody CloneApplicationsSpecificity
RM241IHC, WB, IFHuman cyclin D1
#2922WB, IPHuman, endogenous

Antiplexin D1 Antibody in Neuropathy

Antiplexin D1 IgG is associated with small fiber neuropathy (SFN) and neuropathic pain:

  • Prevalence: 12.7% of SFN patients test positive vs. 3.6% in healthy controls .

  • Pathogenicity: Intrathecal injection in mice induced mechanical/thermal hypersensitivity and upregulated phosphorylated ERK in dorsal root ganglia .

  • Clinical Utility: Potential biomarker for immunotherapy-responsive SFN .

Comparative Analysis of D1 Antibodies

Antibody TypeTargetKey ApplicationAssociated Disease
D1.1 gangliosideGerminal cell markerNeurodevelopmental studiesN/A
Protein kinase D1PRKD1 enzymeSignal transduction researchCongenital heart defects
Cyclin D1CCND1 oncoproteinCancer diagnostics/therapeuticsBreast cancer, lymphomas
Antiplexin D1Plexin D1 receptorNeuropathy biomarker identificationSmall fiber neuropathy

Research and Clinical Implications

  • Therapeutic Targeting: Cyclin D1 antibodies aid in stratifying patients for CDK4/6 inhibitors (e.g., palbociclib) .

  • Diagnostic Tools: Antiplexin D1 antibodies may improve SFN subtyping and treatment selection .

  • Mechanistic Insights: D1.1 ganglioside antibodies elucidate cerebellar development and neuroglial maturation .

Product Specs

Buffer
**Preservative:** 0.03% Proclin 300
**Constituents:** 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (12-14 weeks)
Synonyms
D1Flower-specific defensin antibody; NaD1 antibody
Target Names
D1
Uniprot No.

Target Background

Function
This plant defense peptide exhibits antifungal activity against *Fusarium oxysporum* and *Botrytis cinerea*. It also demonstrates the ability to retard the growth of the Lepidopteran insect pests *Helicoverpa armigera* and *Helicoverpa punctigera*.
Protein Families
DEFL family
Subcellular Location
Secreted. Vacuole.
Tissue Specificity
Most abundant in the epidermal cell layers of the petals and sepals, within the connective cells of the anthers, and the cortical cells of the style. Not detected in the tapetum, pollen mother cells, the transmitting tissue, the vascular bundles of the an

Q&A

What are the different types of D1 antibodies used in research?

D1 antibodies in research primarily include:

  • Dopamine Receptor D1 (DRD1) antibodies: These recognize the D1 subtype of dopamine receptors, which are G-protein coupled receptors abundant in the central nervous system. These antibodies are critical for neurological and psychiatric research .

  • Cyclin D1 antibodies: These target G1/S-specific cyclin-D1 (CCND1), a protein kinase essential for cell cycle progression that promotes G1 to S phase transition .

  • Plexin D1 antibodies: These recognize plexin D1, a transmembrane glycoprotein that functions as a semaphorin receptor and plays roles in immune responses and neurological functions .

Each antibody type is designed for specific research applications with distinct molecular targets and experimental considerations.

How do researchers determine which application methods are suitable for particular D1 antibodies?

Researchers must consider several factors when selecting application methods:

D1 Antibody TypeCommon ApplicationsValidated SpeciesConsiderations
DRD1WB, IHC-P, IHC-Fr, ICC/IFHuman, Mouse, RatObserved at ~74 kDa; non-boiled samples recommended
Cyclin D1WB, IHC, ICC, Flow CytometryHuman, Mouse, RatObserved at ~36 kDa; paraffin sections require antigen retrieval
Plexin D1WB, IHC, Flow CytometryHumanDetected at ~250 kDa; important for membrane localization studies

The choice depends on experimental goals, tissue/cell type, and the specific epitope recognized by the antibody. Most manufacturers provide application-specific validation data and recommendations that should be considered when designing experiments .

What protocols optimize the specificity of D1 antibodies in Western blotting experiments?

For optimal Western blot results with D1 antibodies:

  • Sample preparation: For DRD1 antibodies, samples should not be boiled as this may cause protein aggregation. The molecular weight observed for DRD1 is approximately 74 kDa .

  • Blocking conditions: 5% non-fat dry milk in TBST is typically recommended for DRD1 antibody applications .

  • Antibody dilution: Optimal dilutions vary by product. For example:

    • DRD1 antibody [EPR24102-105] is effective at 1/1000 dilution

    • Cyclin D1 antibodies may be used at 1-2 μg/mL concentrations

  • Controls: Always include appropriate positive and negative controls. For DRD1, mouse striatum serves as a positive control, while heart and kidney tissues are recommended negative controls .

  • Signal detection: For low-abundance proteins like DRD1 in certain tissues, longer exposure times may be required (e.g., 69 seconds for rat samples versus 15 seconds for mouse samples) .

How can researchers validate the specificity of their D1 antibodies?

Antibody specificity validation is critical and should include:

  • Western blot analysis: Confirm the antibody detects a protein of the expected molecular weight. For instance, DRD1 typically appears at ~74 kDa, while Cyclin D1 appears at ~36 kDa .

  • Immunoprecipitation assays: These can confirm antibody specificity as demonstrated in studies of D2 receptor antibodies, where the specificity was confirmed using immunoprecipitation along with Western blot analysis .

  • Tissue/cell expression pattern analysis: Compare antibody staining with known expression patterns. For example, DRD1 is highly expressed in striatum but shows minimal expression in heart and kidney tissues .

  • Knockout/knockdown controls: If available, test the antibody in samples where the target protein has been genetically deleted or reduced.

  • Cross-reactivity testing: Evaluate whether the antibody recognizes related proteins. For example, anti-Cyclin D1 clone G124-326 does not cross-react with human cyclins D2 and D3 .

How are DRD1 antibodies used to investigate neuronal colocalization of dopamine receptors?

DRD1 antibodies have been instrumental in investigating the cellular colocalization of dopamine D1 and D2 receptors, providing insights into brain function and neurotransmission:

  • Double labeling techniques: Studies have combined immunocytochemical labeling of D2 receptors with in situ hybridization to detect D1 mRNA expression .

  • Regional analysis: This approach has revealed that neurons expressing both D1 and D2 receptors are restricted to specific regions of the rat brain, including the dorsal endopiroform nucleus, intercalated nucleus of amygdala, piriform cortex, and several other specific regions .

  • Western blot validation: The specificity of D2 receptor antibodies used in these studies was confirmed by Western blot, which revealed a specific broad band centered at 67 kDa in transfected cells and a major protein of 88 kDa in the caudate-putamen .

This research has demonstrated that specific neurons express both D1 and D2 receptors, but this colocalization is regionally restricted—a finding with significant implications for understanding dopaminergic neurotransmission and developing targeted therapeutics .

What role do Plexin D1 antibodies play in small fiber neuropathy research?

Plexin D1 antibodies have emerged as important tools in small fiber neuropathy (SFN) research:

  • Diagnostic applications: Plexin D1-IgG has been identified as a potential biomarker for immunotherapy in SFN, with studies showing higher prevalence of these antibodies in SFN patients compared to healthy controls (12.7% vs. 0%) .

  • Pathogenicity studies: IgG purified from plexin D1-IgG-positive patients induces significant mechanical and/or thermal hypersensitivity when intrathecally injected into mice, confirming their pathogenic nature .

  • ELISA development: Researchers have developed specialized ELISA techniques using recombinant extracellular domains of human plexin D1 containing the major epitope, achieving 75% sensitivity and 100% specificity when compared to tissue-based indirect immunofluorescence assays .

  • Small neuron activation: In mice injected with plexin D1-IgG-positive patient IgG, phosphorylated extracellular signal-regulated protein kinase (pERK) immunoreactivity was confined to small dorsal root ganglion neurons, demonstrating the specificity of the pathogenic effect .

These findings suggest that while plexin D1-IgG has low prevalence, it represents a significant biomarker for identifying patients who might benefit from immunotherapy for SFN .

How can researchers address contradictory results when using D1 antibodies in different experimental systems?

When facing contradictory results with D1 antibodies:

  • Antibody validation discrepancies: Different antibodies targeting the same protein may recognize different epitopes. For example, multiple DRD1 antibodies target different amino acid regions (AA 101-200, AA 11-100, or N-terminus) . Always confirm which epitope your antibody recognizes.

  • Expression level variations: D1 receptor expression varies significantly by brain region. Western blot analysis of D2 receptor antibodies has shown strong expression in the caudate-putamen, less in the cortex, and none in the hypothalamic region .

  • Methodological differences: Sample preparation critically affects results. For DRD1, non-boiled samples are recommended as boiling may cause protein aggregation .

  • Antibody cross-reactivity: Some antibodies may cross-react with related proteins. Thorough specificity testing using recombinant proteins or knockout models can address this issue.

  • Reproducibility strategy: When results differ between laboratories, consider:

    • Using multiple antibodies targeting different epitopes of the same protein

    • Employing complementary techniques (e.g., in situ hybridization with immunohistochemistry)

    • Standardizing protocols across research groups

What are the challenges in developing specific blocking antibodies for allergen research, and how do they relate to methodological approaches for D1 antibodies?

Research on blocking antibodies for allergens provides insights applicable to D1 antibody methodology:

  • Epitope targeting specificity: Studies with Fel d1 (cat allergen) blocking antibodies demonstrate the importance of targeting specific epitopes to block IgE binding . Similarly, when developing or selecting D1 antibodies, identifying critical functional epitopes is essential.

  • Conformational considerations: Fel d1-to-IgE binding is conformational, suggesting polyclonal antibodies targeting multiple epitopes may have better blocking potential . This principle applies to D1 antibodies where protein conformation affects epitope accessibility.

  • Validation through multiple assays: Researchers validated Fel d1 blocking antibodies using:

    • Modified antigen-IgE-chimeric ELISA

    • Basophil degranulation assays with humanized cell lines

    Similar multipronged validation approaches should be considered for D1 antibodies in complex research applications.

  • Pre-incubation protocols: The methodology of pre-incubating target proteins with blocking antibodies before performing functional assays can be adapted for mechanistic studies involving D1 receptors or cyclins.

How are D1 antibodies being used in advanced neuroscience and cancer research?

D1 antibodies are increasingly applied in cutting-edge research areas:

  • Neuroscience applications:

    • DRD1 antibodies enable investigation of dopamine receptor distribution and function in specific brain regions

    • Studies employing these antibodies have identified region-specific colocalization of D1 and D2 receptors, challenging previous assumptions about their segregation

    • Plexin D1 antibodies have helped establish the pathogenic role of autoantibodies in small fiber neuropathy, creating new therapeutic possibilities

  • Cancer research applications:

    • Cyclin D1 antibodies are essential tools in studying cell cycle dysregulation in cancer, as CCND1 is overexpressed in up to 50% of human breast cancers

    • Plexin D1 detection in melanoma and other tumors provides insights into tumor progression and potential therapeutic targets

    • These antibodies help identify patients who might benefit from targeted cell cycle inhibitor therapies

What methodological considerations are important when using D1 antibodies for detecting protein expression in complex tissue samples?

For optimal detection in complex tissues:

  • Antigen retrieval optimization: For immunohistochemistry applications, heat-induced epitope retrieval using appropriate buffers is often necessary, particularly for formalin-fixed, paraffin-embedded sections .

  • Signal amplification strategies: For low-abundance targets, consider:

    • Using high-sensitivity detection systems (e.g., polymer-based detection)

    • Optimizing incubation times and temperatures

    • Testing signal amplification methods like tyramide signal amplification

  • Background reduction techniques:

    • Careful blocking with appropriate proteins (BSA, normal serum)

    • Using specialized blocking reagents for endogenous peroxidase, biotin, or immunoglobulins

    • Optimizing antibody dilutions to reduce non-specific binding

  • Multi-marker analysis: For colocalization studies, carefully select compatible antibodies:

    • Consider antibody species to avoid cross-reactivity

    • Optimize serial section or multiplex staining protocols

    • Use appropriate controls to confirm specificity in the multiplex context

  • Digital image analysis: Implement quantitative analysis methods for precise measurement of expression levels and distribution patterns, especially important when comparing different experimental conditions or disease states.

These methodological considerations ensure reliable, reproducible results when using D1 antibodies in complex experimental systems.

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