DDX19B Antibody

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Description

Introduction

The DDX19B antibody is a polyclonal or monoclonal reagent designed to detect and study the DEAD-box RNA helicase DDX19B protein. DDX19B is a key regulator of mRNA export, translation termination, and nonsense-mediated mRNA decay (NMD). Its role in cellular processes such as nuclear export of viral RNAs and interaction with translation initiation factors has made it a focal point in molecular biology and virology research.

The antibody is primarily used in Western blot (WB), immunoprecipitation (IP), and immunocytochemistry (ICC) applications. This article synthesizes data from diverse sources to provide a detailed analysis of its technical specifications, research applications, and key findings.

2.1. Antibody Characteristics

ParameterValue
Host/IsotypeRabbit/IgG (commonly used)
ReactivityHuman, mouse, rat (Proteintech , Abcam )
ApplicationsWB, IP, ELISA, ICC/IF (Abcam )
ImmunogenRecombinant protein fragments (e.g., aa 1–250) or synthetic peptides
ConjugateUnconjugated (Proteintech ); conjugated options available
Storage-20°C (Proteintech , Abcam )

2.2. Recommended Dilutions

ApplicationDilution
Western Blot1:500–1:3000
Immunoprecipitation0.5–4.0 µg/1–3 mg lysate
ELISAVaried (optimize per assay)

3.1. mRNA Export and Viral Pathogenesis

The DDX19B antibody has been instrumental in studying its role in mRNA export. For instance, in influenza A virus (IAV) replication, DDX19B facilitates the nuclear export of viral RNAs, as shown by its depletion leading to delayed viral protein synthesis . Rescue experiments with RNA-binding defective mutants (e.g., R372G, R428Q) confirmed that RNA-binding activity is critical for this process .

3.2. Translation Regulation

  • CTIF Interaction: DDX19B binds CTIF (CBC-dependent translation initiation factor) to restrict translation initiation to the perinuclear region. Disruption of this interaction via mutations (e.g., F460A) causes uncontrolled cytoplasmic translation and NMD dysregulation .

  • Translation Termination: DDX19B stabilizes ribosomal complexes with eRF1 (eukaryotic release factor 1), enhancing peptide release during termination .

3.3. Nonsense-Mediated Decay (NMD)

DDX19B inhibits NMD by modulating CTIF activity on CBC-bound mRNAs. Overexpression of CTIF mutants lacking DDX19B binding (e.g., F460A) increases NMD efficiency, as observed in globin and GPx1 reporter assays .

4.1. DDX19B in Cellular Pathways

PathwayRoleMethods
mRNA ExportRemodels mRNP complexes to facilitate cytoplasmic mRNA binding proteinsWB, IP, RNA FISH
Translation InitiationAnchors CTIF near NPCs to restrict initiation to perinuclear regionsICC, polysome fractionation
NMDInhibits CTIF-mediated decay of faulty mRNAsqRT-PCR, NMD reporters

4.2. Viral Interactions

  • IAV: DDX19B binds viral polymerase and RNAs to enhance mRNA export, with ATPase activity critical for this function .

  • HIV: DDX19B interacts with Gag protein, potentially influencing viral assembly [unpublished data].

Product Specs

Buffer
Phosphate-buffered saline (PBS) with 0.1% Sodium Azide, 50% Glycerol, pH 7.3. Store at -20°C. Avoid repeated freeze-thaw cycles.
Lead Time
Typically, we can ship the products within 1-3 business days of receiving your order. Delivery time may vary depending on the purchase method or location. Please consult your local distributors for specific delivery timeframes.
Synonyms
ATP-dependent RNA helicase DDX19B antibody; DBP5 antibody; Dbp5; yeast; homolog of antibody; DD19B_HUMAN antibody; DDX19 antibody; DDX19B antibody; DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B antibody; DEAD box protein 19B antibody; DEAD box RNA helicase DEAD5 antibody; DEAD-box protein 5 antibody; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (Dbp5; yeast; homolog) antibody; DEAD/H BOX 19 antibody; helicase DEAD5 antibody; RNAh antibody; TDBP antibody; yeast Dbp5 homolog antibody
Target Names
DDX19B
Uniprot No.

Target Background

Function
DDX19B is an ATP-dependent RNA helicase that plays a critical role in the export of mRNA from the nucleus. Rather than unwinding RNA duplexes, DDX19B functions as a remodeler of ribonucleoprotein particles. It facilitates the dissociation of proteins bound to nuclear mRNA and their replacement with cytoplasmic mRNA binding proteins.
Gene References Into Functions
  1. These findings suggest that DBP5, GLE1, and IP6 have distinct and conserved roles in cytoplasmic mRNA expression. Variations in phenotype arise from the specific functions of each protein in intracellular mRNA metabolism. PMID: 29746542
  2. DDX19 interacts with pre-termination complexes (preTCs) in a nucleotide-dependent manner. Moreover, DDX19 enhances the efficiency of termination complex (TC) formation and peptide release in the presence of eukaryotic release factors. DDX19 also stabilizes ribosome complexes with translation elongation factors eEF1 and eEF2. PMID: 28180304
  3. Ddx19 is an RNA export factor essential for nuclear import of the SRF coactivator MKL1. PMID: 25585691
  4. Dbp5, Gle1-IP6, and Nup159: a working model for mRNP export. PMID: 22064466
  5. Identification and characterization of a gene encoding a novel isoform. PMID: 12219940
  6. In vitro assays demonstrate that NUP214 reduces both the RNA binding and ATPase activities of DBP5. PMID: 19219046
  7. Results describe the crystal structures of human DDX19, a DEXD/H-box protein, in its open and closed cleft conformations. PMID: 19244245

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Database Links

HGNC: 2742

OMIM: 605812

KEGG: hsa:11269

STRING: 9606.ENSP00000288071

UniGene: Hs.221761

Protein Families
DEAD box helicase family, DDX19/DBP5 subfamily
Subcellular Location
Cytoplasm. Nucleus, nucleoplasm.

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