The DERP1 Antibody refers to immunoglobulins produced in response to exposure to Der p 1, a cysteine protease and major allergen from the house dust mite Dermatophagoides pteronyssinus. These antibodies play critical roles in both allergic sensitization (IgE) and potential therapeutic interventions (IgG/IgA) . Der p 1 is structurally homologous to Der f 1 (81% sequence identity) from D. farinae, but species-specific antibody responses dominate due to distinct conformational epitopes .
X-ray crystallography reveals that Der p 1 interacts with antibodies via conformational epitopes. Key findings include:
Cross-reactive epitopes: The mAb 4C1 binds a conserved region shared between Der p 1 and Der f 1, partially overlapping with human IgE-binding sites .
Species-specific epitopes: mAbs 5H8 and 10B9 target unique Der p 1 regions. Mutagenesis studies show residues Ser13, Ser19, and Ser180 in Der p 1 are critical for mAb 10B9 specificity .
| Construct | (Mean) | Maximum Response Units |
|---|---|---|
| Wild-type Der f 1 | 39.1 μM | 3,560 |
| S13A S19Q S180N | 2 nM | 97 |
| Recombinant Der p 1 | 54 nM | 99.3 |
| Data from surface plasmon resonance (SPR) analysis . |
Clinical utility: IgE against Der p 1 has 89% positivity in D. pteronyssinus-sensitized asthmatics and predicts immediate asthmatic responses (AUC = 0.913) .
Specificity: Der p 1-specific IgE outperforms crude HDM extracts in distinguishing genuine sensitization .
| Antibody Type | Allergic Patients (AU/mL) | Controls (AU/mL) | -value |
|---|---|---|---|
| IgE (Der p 1) | 12.5 ± 3.2 | 1.8 ± 0.6 | <0.0001 |
| IgG (Der p 1) | 45.2 ± 8.7 | 5.4 ± 1.2 | <0.0001 |
| Data derived from ELISA studies . |
Rebinant Der p 1 vaccines: Subcutaneous immunotherapy with recombinant Der p 1 increases IgG titers and reduces IgE-mediated responses in murine models .
Immunotoxins: A chimeric protein (proDerp1αS) combining Der p 1 with α-sarcin induces targeted cell death in IgE-sensitized basophils, showing promise for allergen-specific therapy .
Epithelial barrier disruption: Der p 1 cleaves claudin-1, reducing transepithelial electrical resistance (TEER) by 60–70% in nasal epithelial cells, exacerbating inflammation via IL-6 secretion .
Dose-dependent effects: TEER reduction peaks at 30 minutes post-exposure (), with greater sensitivity in HDM-allergic patients () .
Reproducibility: Intra-assay CV for anti-Der p 1 IgG ELISA kits ranges from 6.0% (3.2 ng/ml) to 8.9% (50 ng/ml) .
Standardization: Der p 1-specific IgA/IgG/IgE levels are quantified using AU/mL thresholds (mean + 2 SD of controls) .
Research priorities include optimizing epitope-focused vaccines and understanding IgE-FcεRI internalization mechanisms to enhance immunotoxin efficacy . The creation of chimeric allergens (e.g., Der f 1 mutants with Der p 1 epitopes) provides a blueprint for cross-reactive allergy treatments .
The DERP1 antibody is generated through immunization of a rabbit with a recombinant Dermatophagoides pteronyssinus DERP1 (99-320aa). This process triggers the rabbit's B lymphocytes to produce IgG antibodies specifically targeting the immunogen. The polyclonal DERP1 antibody is purified from the rabbit serum using protein A/G affinity chromatography. It is recommended for use in detecting Dermatophagoides pteronyssinus DERP1 protein in ELISA and Western blot assays.
DERP1 (Der p 1) is a major allergen produced by the house dust mite Dermatophagoides pteronyssinus. This protein is a primary trigger of allergic reactions in susceptible individuals, particularly those with dust mite allergies. Der p 1, possessing protease activity, is capable of cleaving transmembrane proteins like occludin and claudin, leading to disruption of the bronchial epithelial barrier.
Der p 1 is a major allergen produced by the house dust mite Dermatophagoides pteronyssinus that belongs to the papain-like cysteine protease family. It is a critical protein in allergy research for several reasons:
Der p 1 functions as a powerful allergen due to its protease activity, which enables it to cleave transmembrane proteins like occludin and claudin, disrupting the bronchial epithelial barrier . This epithelial damage facilitates allergen penetration and sensitization. Epidemiological studies have highlighted Der p 1 as an independent risk factor for asthma severity .
The allergen triggers IgE-mediated hypersensitivity reactions in susceptible individuals, making it particularly relevant for studying the mechanisms underlying dust mite allergies. Structurally, Der p 1 contains both conformational and linear epitopes that interact with antibodies, making it an excellent model for studying allergen-antibody interactions .
Methodologically, researchers use Der p 1 to:
Develop therapeutic strategies for allergic diseases
Investigate fundamental immunological mechanisms
Create diagnostic tools for allergen quantification
Design novel immunotherapy approaches
Der p 1 antibodies for research applications are produced through several methodological approaches:
The standard method involves immunizing rabbits with recombinant Dermatophagoides pteronyssinus DERP1 (typically amino acids 99-320). This stimulates the rabbit's immune system, specifically B lymphocytes, to produce IgG antibodies specific to the Der p 1 immunogen. These polyclonal antibodies are then purified from rabbit serum using protein A/G affinity chromatography techniques .
For more specific applications, monoclonal antibodies are developed through:
Immunization of mice with recombinant dimeric Der p 1
Isolation of B cells producing Der p 1-specific antibodies
Cell fusion to create hybridomas
Screening and selection of clones producing antibodies with desired specificity
Large-scale production and purification via affinity chromatography
Recent advances include:
Phage display libraries for isolating Der p 1-specific antibody fragments
Combinatorial libraries derived from peripheral blood mononuclear cells of allergic donors
Single B cell antibody sequencing to obtain human monoclonal antibodies
The purification process typically involves multiple chromatography steps to ensure high specificity and purity for research applications.
Der p 1 antibodies serve as versatile tools in allergy research through various experimental methodologies:
ELISA: Two-site monoclonal antibody systems use a capture antibody (such as 4C1, 5H8, or 6A8) immobilized on plates and a biotinylated detection antibody (such as B-5H8 or B-4C1) followed by streptavidin-peroxidase and ABTS/H₂O₂ substrate development .
Western Blotting: For detection of Der p 1 in complex protein mixtures, using antibodies at specific dilutions to identify the approximately 25 kDa protein band .
X-ray Crystallography: Formation of Der p 1-antibody complexes with Fab fragments to determine the precise atomic arrangements at epitopes .
Nuclear Magnetic Resonance (NMR): Using differentially labeled Der p 1 (such as methyl-labeled) to observe chemical shift perturbations upon antibody binding .
Inhibition Assays: Measuring the ability of antibodies to block IgE binding to Der p 1, which provides information about potential therapeutic applications .
Cell-Based Assays: Evaluating the effect of Der p 1-antibody complexes on effector cells from allergic individuals, including degranulation assays using sensitized basophils .
Immunotoxin Development: Using Der p 1 as a targeting domain fused with cytotoxic moieties like α-sarcin ribotoxin to specifically target effector cells involved in allergic reactions .
The structural differences between Der p 1 (Dermatophagoides pteronyssinus) and Der f 1 (Dermatophagoides farinae) that affect antibody recognition have been elucidated through crystallography and mutagenesis studies:
X-ray crystallography of allergen-antibody complexes revealed that specific amino acid differences at key positions determine species specificity and cross-reactivity . The epitopes for species-specific antibodies (mAb 5H8 and 10B9) are structurally distinct from those recognized by cross-reactive antibodies (mAb 4C1).
When examining the structural data:
Der p 1-specific mAb 5H8 and 10B9 epitopes are located in different, non-overlapping regions of the Der p 1 molecule
The epitope for mAb 10B9 partially overlaps with that for cross-reactive mAb 4C1
The substitution of just 1-3 amino acid residues in Der f 1 with the corresponding Der p 1 residues was sufficient to create binding sites for Der p 1-specific antibodies
Quantitatively, standard Der p 1 detection assays typically show cross-reactivity with Der f 1 of approximately 10% or less . This limited cross-reactivity reflects the structural similarities between the two allergens while highlighting the importance of specific amino acid differences.
Analysis of mAb binding via surface plasmon resonance and ELISA inhibition assays demonstrated that among monoclonal antibodies raised against these allergens, only about 3% showed cross-reactivity between Der p 1 and Der f 1 .
Optimal storage and handling of Der p 1 antibodies require specific methodological approaches to maintain their structural integrity and immunological function:
Based on manufacturer protocols, most Der p 1 antibody preparations should be stored at -20°C for long-term stability . This includes:
Standard preparations (lyophilized or in solution)
Detection antibodies
Sample/standard dilution buffers
Streptavidin peroxidase components
| Component | Storage Temperature | State | Duration of Stability |
|---|---|---|---|
| Standard (e.g., lyophilized) | -20°C | Lyophilized | 1+ years |
| Detection Antibody | -20°C | Solution | 6-12 months |
| Dilution Buffers | -20°C | Solution | 6-12 months |
| Streptavidin Peroxidase | -20°C | Solution | 6-12 months |
For optimal experimental results:
Thaw components gradually at room temperature or 4°C
Avoid repeated freeze-thaw cycles (limit to ≤5 cycles)
Prepare working dilutions fresh for each experiment
For biotinylated detection antibodies, prepare 1:1,000 detection antibody/conjugate mix immediately before use
Always validate antibody function using positive and negative controls
Perform regular titer checks if storing diluted antibody working solutions
Protect antibody solutions from direct sunlight during experimental procedures
Monitor pH and salt concentration of buffer solutions to prevent antibody denaturation
Der p 1 epitope mapping requires sophisticated methodological approaches to identify antibody binding sites with high precision:
X-ray Crystallography: The gold standard for precise epitope mapping involves:
Formation of Der p 1-Fab fragment complexes
Crystal growth under optimized conditions
X-ray diffraction data collection
Structure determination at atomic resolution
Analysis of contact residues between Der p 1 and antibody
This approach has successfully mapped epitopes for mAb 4C1, 5H8, and 10B9, revealing that Der p 1-specific antibodies bind to different, non-overlapping regions of the allergen .
Site-Directed Mutagenesis: Based on crystallographic data, this approach involves:
Identification of key residues at the interface between Der p 1 and antibodies
Systematic mutation of these residues
Expression of mutant proteins
Assessment of antibody binding through ELISA or other immunoassays
Quantification of binding affinity changes
This method successfully identified determinants of species specificity by creating Der f 1 mutants that could bind Der p 1-specific antibodies through substitution of just 1-3 amino acids .
Nuclear Magnetic Resonance (NMR): Particularly useful for studying dynamic aspects of epitopes:
Methyl-labeled Der p 1 can be used to observe chemical shift perturbations upon antibody binding
Detergent can be added to tune the allergen-antibody binding for optimal NMR signal detection
Broadening of NMR signals indicates residues in proximity to the antibody binding site
Measures protection of amide hydrogen atoms from exchange upon antibody binding
Can identify peptides involved in antibody interaction
Provides information on conformational epitopes that may be missed by other techniques
Surface complementarity indexes (Sc) can be calculated to measure the geometric fit between allergen and antibody surfaces, with values from 0 to 1 (where 1 indicates perfect fit) .
Optimizing Der p 1 antibody-based ELISA requires systematic methodological refinement across multiple parameters:
Capture Antibody: Select monoclonal antibodies with high affinity and specificity for Der p 1 (e.g., mAb 4C1, 5H8, or 6A8)
Detection Antibody: Use biotinylated antibodies (e.g., B-4C1 or B-5H8) that bind to non-overlapping epitopes from the capture antibody
Antibody Concentration: Titrate to determine optimal working dilutions that provide maximum signal-to-noise ratio
Coating Conditions:
Optimize buffer pH and ionic strength
Determine optimal coating concentration and time
Coat plates overnight at 4°C for maximum binding
Blocking and Washing:
Incubation Parameters:
For accurate quantification, prepare standards using a two-fold dilution series:
| Well | Standard Concentration | Preparation Method |
|---|---|---|
| B1 | 125 ng/mL | Add 500 μL of 250 ng/mL standard to 500 μL assay buffer |
| C1 | 62.5 ng/mL | Add 500 μL of 125 ng/mL standard to 500 μL assay buffer |
| D1 | 31.25 ng/mL | Add 500 μL of 62.5 ng/mL standard to 500 μL assay buffer |
| E1 | 15.63 ng/mL | Add 500 μL of 31.25 ng/mL standard to 500 μL assay buffer |
| F1 | 7.81 ng/mL | Add 500 μL of 15.63 ng/mL standard to 500 μL assay buffer |
| G1 | 3.91 ng/mL | Add 500 μL of 7.81 ng/mL standard to 500 μL assay buffer |
| H1 | 1.95 ng/mL | Add 500 μL of 3.91 ng/mL standard to 500 μL assay buffer |
Prepare fresh detection antibody/conjugate mix (1:1,000 dilution)
Optimize substrate development time for maximum sensitivity
Consider using streptavidin-peroxidase with ABTS/H₂O₂ substrate for consistent results
Use log/log plots to linearize standard curve data for more accurate calculations
Calculate results by averaging duplicate OD values and subtracting blanks
Plot standards against known concentrations to determine unknown samples
Cross-reactivity assessment between Der p 1 and Der f 1 antibodies requires systematic methodological approaches:
Coat plates with one allergen (e.g., Der p 1)
Pre-incubate antibodies with varying concentrations of potential cross-reactive allergen (e.g., Der f 1)
Add the mixture to coated plates
Detect bound antibody and quantify inhibition
Calculate cross-reactivity as the ratio of allergen concentrations needed for 50% inhibition
This approach involves:
Identifying key residues in Der p 1 and Der f 1 that differ between species
Creating mutant allergens with substitutions at these positions
Testing antibody binding to wild-type and mutant allergens
Quantifying the effect of mutations on binding affinity
Studies have shown that substituting 1-3 amino acid residues in Der f 1 with corresponding Der p 1 residues can create binding sites for Der p 1-specific antibodies like mAb 10B9 .
This technique provides real-time binding kinetics:
Immobilize allergen on sensor chip
Flow antibody over the surface
Measure association and dissociation rates
Calculate binding constants (KD)
Compare values between Der p 1 and Der f 1 for the same antibody
Standard Der p 1 detection assays typically show cross-reactivity with Der f 1 of approximately 10% or less . This can be precisely measured using:
Prepare standard curves with both pure Der p 1 and Der f 1
Calculate the ratio of signal intensities at equivalent concentrations
Express cross-reactivity as a percentage
In one comprehensive study, only about 3% (2/53) of monoclonal antibodies raised against Der p 1 and Der f 1 were cross-reactive, with most recognizing species-specific epitopes .
Different monoclonal antibodies against Der p 1 exhibit distinct characteristics in terms of specificity, affinity, and epitope recognition, which have been methodically analyzed:
X-ray crystallography studies have revealed the structural basis for antibody specificity :
| Monoclonal Antibody | Specificity | Epitope Location | Overlap with Other mAbs |
|---|---|---|---|
| mAb 5H8 | Der p 1-specific | Non-overlapping with 10B9/4C1 | None |
| mAb 10B9 | Der p 1-specific | Distinct region | Partial overlap with 4C1 |
| mAb 4C1 | Cross-reactive (Der p 1 & Der f 1) | Interface region | Partial overlap with 10B9 |
| mAb 6A8 | Der f 1-specific | Not fully characterized | Not determined |
When examining the structural data of Der p 1-antibody complexes:
The epitope for mAb 5H8 shows no overlap with the epitopes for 4C1 or 10B9
Upon binding to Der p 1, the Fab fragment of mAb 10B9 forms a rare α helix in its third CDR of the H chain
Surface area and hydrogen bond patterns between allergen and antibody are similar despite different epitope locations
The antibodies show different functionalities:
Some antibodies interfere with IgE binding, making them potential therapeutic tools
Differential ability to block allergen-IgE interactions correlates with epitope location
The cross-reactive mAb 4C1 and Der p 1-specific mAb 10B9 compete for binding to Der p 1 but not to Der f 1
Analysis of binding kinetics reveals:
Differences in association and dissociation rates
Variable shape complementarity indices (Sc) that measure the geometric fit between allergen and antibody surfaces
The ability of specific antibody combinations to block up to 83% of IgE binding to natural allergens
Der p 1-antibody complexes exhibit distinct structural and biophysical characteristics that have been elucidated through advanced methodologies:
X-ray crystallography has revealed the atomic details of Der p 1 in complex with Fab fragments of monoclonal antibodies :
Epitope Distribution: The epitopes for Der p 1-specific antibodies (mAb 5H8 and 10B9) are located in different, non-overlapping regions of the Der p 1 molecule
Binding Interface: Despite different epitope locations, the surface area and identity of amino acid residues involved in hydrogen bonds between allergen and antibody are similar
Structural Adaptations: Upon binding to Der p 1, the Fab fragment of mAb 10B9 undergoes conformational changes, forming a rare α helix in its third CDR of the H chain
Quantitative analysis of Der p 1-antibody complexes reveals:
| Parameter | Typical Range | Significance |
|---|---|---|
| Surface Area | 600-900 Ų | Extent of molecular contact |
| Shape Complementarity Index (Sc) | 0.60-0.75 | Geometric fit between surfaces |
| Number of Hydrogen Bonds | 8-15 | Strength of specific interactions |
| CDR Involvement | H1, H2, H3, L1, L2, L3 | Distribution of paratope |
NMR studies have provided insights into the dynamic aspects of Der p 1-antibody interactions:
Chemical shift perturbations between bound and free states identify residues involved in antibody binding
Differential line broadening of NMR signals indicates residues in proximity to the antibody binding site
Methyl labeling allows observation of Der p 1-antibody complexes at high molecular weights
Detailed analysis of epitope-paratope interactions shows:
Conformational epitopes predominate over linear epitopes
Epitopes can include carbohydrate moieties (as seen in the related allergen Bla g 2)
The cross-reactive epitope (mAb 4C1) and species-specific epitope (mAb 10B9) partially overlap, explaining their competitive binding behavior
Site-directed mutagenesis provides a methodical approach to designing hypoallergenic Der p 1 variants for immunotherapy:
Based on epitope mapping studies :
Structural Analysis:
Mutation Strategy Development:
Target residues critical for IgE binding but not T-cell epitope recognition
Prioritize mutations that disrupt surface complementarity
Design substitutions that alter charge, size, or hydrophobicity at the binding interface
Mutant Production:
Rigorous testing of candidate hypoallergens involves:
Antibody Binding Assays:
Functional Testing:
Basophil activation tests using cells from allergic patients
Mediator release assays to assess allergenic potential
T-cell proliferation assays to confirm preserved T-cell epitopes
Research has demonstrated successful approaches to creating hypoallergens:
Mutation of specific residues in the epitope for mAb 5H8 resulted in impaired antibody binding to Der p 1
Creation of a Der p 1-specific epitope in Der f 1 required substitution of only 1-3 amino acid residues
These findings suggest targeted mutations can significantly reduce allergenicity while maintaining immunogenicity
The developed hypoallergens can be used for:
Allergen-specific immunotherapy with reduced risk of adverse reactions
Investigation of fundamental mechanisms of IgE responses
Development of personalized approaches to allergen immunotherapy based on patient-specific IgE reactivity profiles
The development of Der p 1-based immunotoxins follows a systematic methodological pathway:
Based on research with the proDerp1αS construct :
Fusion Protein Design:
Expression System Optimization:
The immunotoxin requires validation of both functional domains:
Der p 1 Activity Assessment:
Toxic Moiety Validation:
Rigorous experimental procedures to evaluate therapeutic potential:
In vitro Cell Models:
Primary Cell Testing:
The research demonstrated:
The proDerp1αS construct triggered cell death specifically in Der p 1 sera sensitized cells
Equivalent IgE-binding and degranulation were observed with both the construct and native Der p 1
Lack of cytotoxicity on patient basophils was linked to insufficient internalization after IgE binding
These findings support the development of second-generation immunotoxins with improved internalization properties for more effective allergy treatment strategies.
Conformational dynamics in Der p 1 play a crucial role in antibody binding and epitope recognition, as revealed through sophisticated biophysical methodologies:
Nuclear Magnetic Resonance spectroscopy provides insights into the dynamic nature of Der p 1-antibody interactions :
Chemical Shift Perturbation Analysis:
Methyl Group Labeling Strategy:
At high molecular weights of allergen-antibody complexes, methyl groups remain observable
Methyl-labeled Der p 1 successfully identified binding sites for both human IgE and murine IgG antibodies
This approach revealed that epitopes typically include residues in close proximity that are broadened or perturbed upon antibody binding
X-ray crystallography combined with computational analysis reveals:
Conformational Epitopes:
Solvent Accessibility Changes:
Hydrogen-deuterium exchange mass spectrometry (HDX-MS) shows protection from exchange in regions involved in antibody binding
Three discontinuous peptides in close proximity on the crystal structure can form a single conformational epitope
Surface exposure of key residues determines their contribution to antibody recognition
Studying conformational dynamics presents specific challenges:
Technical Limitations:
Advanced Solutions:
Combining multiple techniques (X-ray crystallography, NMR, HDX-MS) provides complementary information
Tuning solvent conditions empirically can optimize detection of conformational changes
Computational modeling can help predict dynamic behavior based on static structures
The molecular determinants of species specificity and cross-reactivity between Der p 1 and Der f 1 antibodies have been systematically identified through integrated structural and functional approaches:
Site-directed mutagenesis based on structural analysis has revealed:
Critical Amino Acid Positions:
Epitope Engineering Results:
X-ray crystallography of allergen-antibody complexes revealed:
Epitope Comparison:
Overlapping Epitopes:
Experimental measurement of cross-reactivity shows:
Statistical Analysis:
Detection Assay Performance:
A comprehensive approach includes:
Structure-Based Design:
Validation Techniques:
Single B cell antibody sequencing represents a breakthrough methodology for developing human monoclonal IgE antibodies against Der p 1:
The process involves several sophisticated steps:
B Cell Isolation:
Antibody Gene Amplification:
Expression Vector Construction:
This technology overcomes limitations of earlier methods:
Comparison with Traditional Methods:
| Method | Advantages | Limitations |
|---|---|---|
| Phage Display | High-throughput screening | Potential pairing artifacts |
| Hybridoma Technology | Stable production | Inefficient for human IgE |
| Combinatorial Libraries | Diverse repertoire | Random pairing of chains |
| Single B Cell Sequencing | Native pairing preserved | Technical complexity |
Natural Pairing Preservation:
The isolated human monoclonal IgE antibodies enable:
Advanced Epitope Mapping:
Therapeutic Development:
Implementation requires addressing several technical hurdles:
Technical Limitations:
Recent Advancements: