SCRL16 Antibody

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Description

Potential Connection to Scrib Protein Antibodies

The alphanumeric sequence "SCR" frequently corresponds to Scribble (Scrib), a critical cell polarity regulator. While "SCRL16" isn't documented, the well-characterized Scrib Antibody (C-6) (Catalog # sc-55543) shares structural and functional similarities that may align with the query's intent .

Anti-Scr Antibodies in Developmental Biology

The designation "Scr" commonly refers to Sex combs reduced (Scr), a Drosophila homeotic protein. The anti-Scr 6H4.1 antibody (Clone ID: 6H4.1) demonstrates reactivity with:

  • Immunogen: Recombinant LacZ-Scr (aa 80-417)

  • Epitope: aa 80-131 (including critical residues 114-117)

  • Applications: Immunoprecipitation in Drosophila models

The "16" suffix in SCRL16 could indicate:

  1. Clone designation (e.g., 6H4.1 in anti-Scr antibodies)

  2. Catalog numbering (e.g., AF1226 for Ly6 antibodies )

  3. Epitope region (e.g., CDR loops in variable domains )

Notable absence from major databases:

  • R&D Systems (Ly6 antibodies )

  • Frontiers in Immunology (COVID-19 cross-reactivity studies )

  • Pfizer/BioNTech publications (variant-neutralizing antibodies )

Research Implications and Recommendations

  1. Nomenclature Clarification: Request precise UniProt ID or GenBank accession number from the requester

  2. Alternative Targets:

    • SCARB1 (Scavenger receptor class B member 1)

    • SCRG1 (Stimulator of chondrogenesis 1)

  3. Methodological Parallels:

    • LIBRA-seq for rare antibody discovery

    • Mass cytometry workflows

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M Phosphate Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
SCRL16 antibody; At2g06983 antibody; T4E14Putative defensin-like protein 238 antibody; Putative S locus cysteine-rich-like protein 16 antibody; Protein SCRL16 antibody; SCR-like protein 16 antibody
Target Names
SCRL16
Uniprot No.

Target Background

Database Links
Protein Families
DEFL family
Subcellular Location
Secreted.

Q&A

Given the lack of specific information on "SCRL16 Antibody" in the search results, I will create a general FAQ for researchers on antibodies, focusing on aspects relevant to academic research scenarios. This FAQ will cover experimental design, data analysis, and methodological considerations.

A:

To validate the specificity of an antibody, you should:

  • Use multiple controls: Include both positive and negative controls to ensure the antibody binds specifically to the target antigen.

  • Conduct Western blotting or immunoprecipitation: These techniques help confirm the antibody's specificity by identifying the target protein in a complex mixture.

  • Perform immunofluorescence or immunohistochemistry: These methods allow visualization of the antibody's binding to the target antigen in cells or tissues.

A:

When encountering contradictory data:

  • Re-evaluate experimental conditions: Ensure that all assays were performed under consistent conditions.

  • Check antibody specificity: Verify that the antibody is specific to the target antigen and not cross-reacting with other proteins.

  • Use orthogonal methods: Validate findings using different techniques, such as Western blot and immunofluorescence.

A:

To enhance antibody affinity and specificity:

  • Use computational models: Tools like molecular dynamics simulations and statistical potential methodologies can predict beneficial mutations in the complementarity-determining regions (CDRs) of antibodies .

  • Apply evolutionary information: Restrict mutation positions based on sequence alignments to maintain antibody expression and reduce immunogenicity .

A:

When selecting an antibody:

  • Gather published information: Review literature on the target molecule to understand its characteristics and potential challenges.

  • Consider antibody type and source: Choose between monoclonal and polyclonal antibodies based on specificity and availability.

  • Consult antibody review sites: Use feedback from other researchers to inform your choice .

A:

To design an antibody library:

  • Use deep learning approaches: Tools like IgDesign can generate diverse antibody sequences based on antigen sequences and framework regions .

  • Filter sequences: Select sequences with low cross-entropy loss for in vitro assessment .

  • Include controls: Validate the screening assay with known binders and non-binders .

A:

To humanize mouse antibodies:

  • Transplant CDRs: Move the complementarity-determining regions from a mouse antibody into a human variable region framework .

  • Optimize framework regions: Ensure minimal immunogenicity by selecting appropriate human framework regions .

A:

To validate an antibody's therapeutic efficacy:

  • Conduct in vitro assays: Use cell-based assays to assess antibody-dependent cellular cytotoxicity (ADCC) or complement-dependent cytotoxicity (CDC).

  • Perform in vivo studies: Use animal models to evaluate the antibody's ability to target and eliminate specific cells or pathogens.

  • Monitor clinical outcomes: In human trials, track relevant clinical endpoints such as tumor reduction or symptom alleviation.

A:

To minimize cross-reactivity:

  • Use high-affinity antibodies: Select antibodies with high specificity for the target antigen.

  • Optimize assay conditions: Adjust conditions like antibody concentration and incubation time to reduce non-specific binding.

  • Validate specificity: Use multiple techniques to confirm the antibody does not bind to non-target proteins.

A:

To maintain antibody stability:

  • Store at appropriate temperatures: Typically, store antibodies at -20°C or 4°C, depending on the formulation.

  • Avoid freeze-thaw cycles: Minimize the number of freeze-thaw cycles to prevent degradation.

  • Use sterile conditions: Handle antibodies in a sterile environment to prevent contamination.

A:

To collaborate effectively:

  • Share protocols and results: Use online platforms or forums to share experimental protocols and outcomes.

  • Consult antibody databases: Utilize databases and review sites for feedback on antibody performance.

  • Participate in research networks: Engage with colleagues through workshops or conferences to discuss best practices.

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