The alphanumeric sequence "SCR" frequently corresponds to Scribble (Scrib), a critical cell polarity regulator. While "SCRL16" isn't documented, the well-characterized Scrib Antibody (C-6) (Catalog # sc-55543) shares structural and functional similarities that may align with the query's intent .
The designation "Scr" commonly refers to Sex combs reduced (Scr), a Drosophila homeotic protein. The anti-Scr 6H4.1 antibody (Clone ID: 6H4.1) demonstrates reactivity with:
Immunogen: Recombinant LacZ-Scr (aa 80-417)
Epitope: aa 80-131 (including critical residues 114-117)
The "16" suffix in SCRL16 could indicate:
Clone designation (e.g., 6H4.1 in anti-Scr antibodies)
Notable absence from major databases:
Frontiers in Immunology (COVID-19 cross-reactivity studies )
Pfizer/BioNTech publications (variant-neutralizing antibodies )
KEGG: ath:AT2G06983
STRING: 3702.AT2G06983.1
Given the lack of specific information on "SCRL16 Antibody" in the search results, I will create a general FAQ for researchers on antibodies, focusing on aspects relevant to academic research scenarios. This FAQ will cover experimental design, data analysis, and methodological considerations.
To validate the specificity of an antibody, you should:
Use multiple controls: Include both positive and negative controls to ensure the antibody binds specifically to the target antigen.
Conduct Western blotting or immunoprecipitation: These techniques help confirm the antibody's specificity by identifying the target protein in a complex mixture.
Perform immunofluorescence or immunohistochemistry: These methods allow visualization of the antibody's binding to the target antigen in cells or tissues.
When encountering contradictory data:
Re-evaluate experimental conditions: Ensure that all assays were performed under consistent conditions.
Check antibody specificity: Verify that the antibody is specific to the target antigen and not cross-reacting with other proteins.
Use orthogonal methods: Validate findings using different techniques, such as Western blot and immunofluorescence.
To enhance antibody affinity and specificity:
Use computational models: Tools like molecular dynamics simulations and statistical potential methodologies can predict beneficial mutations in the complementarity-determining regions (CDRs) of antibodies .
Apply evolutionary information: Restrict mutation positions based on sequence alignments to maintain antibody expression and reduce immunogenicity .
When selecting an antibody:
Gather published information: Review literature on the target molecule to understand its characteristics and potential challenges.
Consider antibody type and source: Choose between monoclonal and polyclonal antibodies based on specificity and availability.
Consult antibody review sites: Use feedback from other researchers to inform your choice .
To design an antibody library:
Use deep learning approaches: Tools like IgDesign can generate diverse antibody sequences based on antigen sequences and framework regions .
Filter sequences: Select sequences with low cross-entropy loss for in vitro assessment .
Include controls: Validate the screening assay with known binders and non-binders .
To humanize mouse antibodies:
Transplant CDRs: Move the complementarity-determining regions from a mouse antibody into a human variable region framework .
Optimize framework regions: Ensure minimal immunogenicity by selecting appropriate human framework regions .
To validate an antibody's therapeutic efficacy:
Conduct in vitro assays: Use cell-based assays to assess antibody-dependent cellular cytotoxicity (ADCC) or complement-dependent cytotoxicity (CDC).
Perform in vivo studies: Use animal models to evaluate the antibody's ability to target and eliminate specific cells or pathogens.
Monitor clinical outcomes: In human trials, track relevant clinical endpoints such as tumor reduction or symptom alleviation.
To minimize cross-reactivity:
Use high-affinity antibodies: Select antibodies with high specificity for the target antigen.
Optimize assay conditions: Adjust conditions like antibody concentration and incubation time to reduce non-specific binding.
Validate specificity: Use multiple techniques to confirm the antibody does not bind to non-target proteins.
To maintain antibody stability:
Store at appropriate temperatures: Typically, store antibodies at -20°C or 4°C, depending on the formulation.
Avoid freeze-thaw cycles: Minimize the number of freeze-thaw cycles to prevent degradation.
Use sterile conditions: Handle antibodies in a sterile environment to prevent contamination.
To collaborate effectively:
Share protocols and results: Use online platforms or forums to share experimental protocols and outcomes.
Consult antibody databases: Utilize databases and review sites for feedback on antibody performance.
Participate in research networks: Engage with colleagues through workshops or conferences to discuss best practices.