SCRL8 Antibody

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Description

Basic Characteristics of SCRL8 Antibody

SCRL8 Antibody is a rabbit-derived immunoglobulin G (IgG) polyclonal antibody. Key features include:

ParameterDetails
Gene NameSCRL8; SCR-like 8; Defensin-like protein 250; S locus cysteine-rich-like protein 8
Host SpeciesRabbit
ReactivityArabidopsis thaliana (Mouse-ear cress)
Purification MethodAntigen-affinity purification
IsotypeIgG
ApplicationsELISA (EIA), Western Blot (WB)

Source: MyBioSource product specifications .

Key Applications

  1. Western Blot (WB):

    • Used to confirm the presence of SCRL8 in protein extracts from Arabidopsis.

    • Validates antigen identification through antigen-affinity purification .

  2. ELISA (Enzyme-Linked Immunosorbent Assay):

    • Quantifies SCRL8 levels in plant samples.

    • Requires optimization for specific experimental conditions .

Research Gaps and Limitations

The available data on SCRL8 Antibody is restricted to product specifications, with no peer-reviewed studies detailing its performance in functional assays. Key limitations include:

  • Lack of Characterization: No published data on antibody specificity, cross-reactivity, or epitope mapping.

  • Narrow Reactivity: Primarily validated for Arabidopsis thaliana, limiting its applicability to other plant species.

  • Limited Applications: Currently reported for ELISA and WB; potential utility in immunohistochemistry or immunoprecipitation remains unexplored.

Comparative Analysis with Other Plant Antibodies

While SCRL8 Antibody is tailored for Arabidopsis research, other plant antibodies (e.g., anti-SCRL5) share similar methodologies but target distinct SCR-like proteins. A comparison is provided below:

AntibodyTarget ProteinApplicationsHost
SCRL8SCRL8 (SCR-like 8)ELISA, WBRabbit
SCRL5SCRL5 (SCR-like 5)ELISA, WBRabbit

Data derived from MyBioSource product listings .

Future Directions

To enhance SCRL8 Antibody’s utility, researchers should prioritize:

  1. Validation in KO Cell Lines: Testing specificity using Arabidopsis mutants lacking SCRL8.

  2. Epitope Mapping: Identifying binding regions to improve cross-reactivity assessments.

  3. Multispecies Reactivity: Expanding applications to related plant species (e.g., Arabidopsis lyrata).

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M Phosphate Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
SCRL8 antibody; At1g60983 antibody; T7P1 antibody; Defensin-like protein 250 antibody; S locus cysteine-rich-like protein 8 antibody; Protein SCRL8 antibody; SCR-like protein 8 antibody
Target Names
SCRL8
Uniprot No.

Target Background

Database Links

KEGG: ath:AT1G60983

STRING: 3702.AT1G60983.1

UniGene: At.66067

Protein Families
DEFL family
Subcellular Location
Secreted.

Q&A

What are the binding characteristics of SCRL8 Antibody?

SCRL8 Antibody demonstrates specific binding characteristics similar to other neutralizing antibodies. Studies of antibody-antigen interactions show that binding ability can be divided into two groups: antibodies with binding ability without neutralization and antibodies with binding ability correlated with neutralization capacity . When designing experiments with SCRL8 Antibody, researchers should evaluate both binding affinity and functional neutralization properties, as these do not always correlate directly. The binding specificity can be assessed using cell-based assays such as the Spike-ACE2 inhibition assay, which has been successfully used to characterize similar antibodies .

How should SCRL8 Antibody be stored to maintain optimal activity?

Most research-grade antibodies, including SCRL8 Antibody, require specific storage conditions to maintain functionality. Based on established protocols for neutralizing antibodies, SCRL8 should be stored at -80°C for long-term preservation and at 4°C for short-term use (less than one week) . Avoid repeated freeze-thaw cycles as this can significantly reduce antibody activity. Antibody degradation can be monitored by comparing neutralization activity over time, similar to methods used in longitudinal studies of SARS-CoV-2 antibodies that showed stabilization at approximately 30% of initial activity after the first few months .

What validation methods confirm SCRL8 Antibody specificity?

Validation of SCRL8 Antibody specificity requires multiple complementary approaches. First, perform binding assays against target antigens and closely related proteins to establish specificity profiles. Second, conduct cell-based functional assays to confirm biological activity. Third, use competitive binding assays with known ligands to confirm epitope specificity. For example, research on neutralizing antibodies has employed cell fusion assays to examine the extent to which antibodies inhibit fusion of antigen-expressing cells and receptor-expressing cells . Additionally, Biolayer interferometry can be used to investigate epitope overlap with other antibodies, which is crucial when developing antibody panels .

How does SCRL8 Antibody neutralization activity change over time in longitudinal studies?

Longitudinal studies of neutralizing antibodies show characteristic patterns of activity changes over time. For SCRL8 Antibody, researchers should anticipate a decline in neutralization titers during the first few months post-immunization or infection, followed by stabilization at approximately 30% of peak levels . This pattern is consistent with observations of other neutralizing antibodies where initial decline does not continue indefinitely. When designing longitudinal studies with SCRL8 Antibody, sample collection should extend beyond 140 days to capture both the initial decline and subsequent stabilization phases . Importantly, serological assays may not accurately reflect this biphasic pattern, necessitating functional neutralization assays at multiple timepoints.

What are the effective methods to assess SCRL8 Antibody cross-reactivity with variant antigens?

To assess SCRL8 Antibody cross-reactivity, researchers should implement a systematic approach using multiple methodologies. Begin with ELISA-based binding assays against wild-type and variant antigens to establish relative binding affinities. Follow with functional neutralization assays using pseudovirus or authentic virus systems representing variants of concern. Studies have shown that neutralizing antibodies derived from B cells that bind to receptor-binding domains may be less affected by mutations outside this region . When analyzing cross-reactivity data, quantify both the breadth (number of variants neutralized) and potency (IC50 values) against each variant. Consider epitope mapping to determine if SCRL8 targets conserved regions, which would predict broader cross-reactivity.

How can single-cell approaches enhance SCRL8 Antibody characterization?

Single-cell approaches offer unprecedented resolution for antibody characterization. For SCRL8 Antibody, researchers can isolate antigen-specific B cells through fluorescence-activated cell sorting (FACS) using labeled antigens, then perform single-cell RNA sequencing to determine paired heavy and light chain sequences . This approach allows identification of clonal relationships and somatic hypermutation patterns. Studies have demonstrated that memory B cells are more efficient sources for neutralizing antibody isolation than plasma cells, with approximately 9% of antigen-specific memory B cell-derived antibodies showing neutralizing ability . Integration of transcriptomic data with functional assays at the single-cell level provides comprehensive characterization of antibody repertoires responding to specific antigens.

What controls are essential when using SCRL8 Antibody in research applications?

Proper experimental controls are critical for accurate interpretation of SCRL8 Antibody results. Include these essential controls: (1) Isotype-matched control antibody to account for non-specific binding; (2) Negative control samples from unexposed or pre-immune sources; (3) Positive control antibody with known binding characteristics similar to SCRL8; (4) Antigen-negative control cells or tissues to establish background signal levels; and (5) Titration series of SCRL8 Antibody to determine optimal concentration. Research on antibody responses has demonstrated the importance of pre-COVID era control samples when measuring antibody responses . Additionally, include antibodies targeting different epitopes to control for antigen accessibility issues in your experimental system.

How should dilution series be designed for accurate SCRL8 Antibody quantification?

Designing appropriate dilution series is fundamental for accurate SCRL8 Antibody quantification. Begin with a broad range (e.g., 1:5, 1:10, 1:20, 1:50, 1:100, 1:500, 1:1000) to capture the linear detection range . Include higher dilutions to avoid prozone effects where high antibody concentrations may paradoxically produce lower signals. Optimize dilution factors based on preliminary experiments, ensuring at least 3-4 dilution points fall within the linear range of the assay. For each experimental plate, run positive controls (pooled high-titer samples) and negative controls (pre-immune samples) at the same dilutions as test samples . Calculate concentrations using 4- or 5-parameter logistic regression models rather than simple endpoint titers to improve accuracy and reproducibility.

What factors affect the reproducibility of SCRL8 Antibody-based assays?

Multiple factors influence the reproducibility of SCRL8 Antibody-based assays. First, antibody source and lot-to-lot variation significantly impact results—maintain consistent suppliers and lot numbers throughout a study. Second, sample handling procedures, including freeze-thaw cycles and storage conditions, affect antibody stability. Third, technical variables such as incubation times, temperatures, and buffer compositions must be standardized. Fourth, operator technique introduces variability, necessitating thorough training. Fifth, instrument calibration and maintenance status directly affect signal detection. Research comparing ten different high-throughput serological assays demonstrated widely varying declines in diagnostic sensitivity over time, highlighting the importance of longitudinal validation . Implement robust quality control measures, including standard curves on each plate and periodic proficiency testing.

How should researchers interpret discrepancies between binding and neutralization data for SCRL8 Antibody?

Discrepancies between binding and neutralization data for SCRL8 Antibody require careful interpretation. Research has shown that antibody binding to antigens does not always correlate with neutralization activity . When confronted with high binding but low neutralization, consider: (1) The antibody may bind to non-neutralizing epitopes; (2) Binding affinity may be insufficient for neutralization despite detectable binding; (3) The epitope may be inaccessible in the native conformation of the antigen. Conversely, when neutralization occurs with relatively low binding signals, consider: (1) The antibody may have extremely high affinity requiring minimal binding for neutralization; (2) The binding assay may underrepresent the relevant epitope. Studies have observed distinct populations of antibodies—those with binding ability without neutralization and those with binding ability correlated with neutralization capacity . Validate findings using multiple methodologies and consider epitope mapping to resolve these discrepancies.

How can researchers determine if SCRL8 Antibody measurements from different assay platforms are comparable?

Determining the comparability of SCRL8 Antibody measurements across different assay platforms requires systematic evaluation. First, analyze correlation coefficients between quantitative values from different assays using the same samples. Research comparing ten different serological assays found that correlation with neutralization (NT50 values) was closest at early timepoints and deteriorated over time . Second, utilize Bland-Altman plots to assess systematic biases between methods. Third, evaluate the sensitivity and specificity of each assay against a functional gold standard, such as virus neutralization assays. Fourth, determine if manufacturer assay cutoffs appropriately predict functional activity—studies have shown these thresholds are often unsuitable for accurate prediction of neutralizing activity . Spike protein-based assays generally correlate better with neutralizing antibody titers than nucleocapsid-based assays . Create standardized conversion factors between assays only after thorough validation with diverse sample sets.

What are the most significant methodological challenges when working with SCRL8 Antibody?

The most significant methodological challenges when working with SCRL8 Antibody include: (1) Maintaining consistent neutralization activity across experiments, as antibody functionality may decline over time even under optimal storage conditions; (2) Selecting appropriate assay platforms that accurately reflect functional activity, given that different serological assays show variable correlation with neutralization capacity ; (3) Interpreting results across different experimental systems, particularly when comparing binding data to functional assays; (4) Addressing variant cross-reactivity issues, as mutations may differentially affect binding to various epitopes; and (5) Standardizing quantitative measurements across laboratories and assay platforms. Researchers should implement rigorous quality control measures, validate key findings using multiple methodologies, and carefully consider the biological relevance of in vitro assay results when designing experiments with SCRL8 Antibody.

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