DIR12 Antibody

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Description

Definition and Biological Context

DAP12 (TYROBP/KARAP) is a transmembrane adaptor protein critical for signal transduction in immune cells, particularly natural killer (NK) cells, myeloid cells, and B cells . Antibodies targeting DAP12 enable researchers to study its expression, interaction partners, and functional roles in immune regulation.

Key Features of DAP12:

  • Molecular Weight: 10–12 kDa

  • Domains: Short extracellular region, transmembrane domain, and cytoplasmic immunoreceptor tyrosine-based activation motif (ITAM)

  • Assembly: Forms disulfide-linked homodimers that associate with receptors like MAIR-II (CD300d), TREM-1/2, and NKp44 via ionic interactions

Functional Mechanism:

  • Activation: Ligand binding to DAP12-coupled receptors triggers ITAM phosphorylation by Src kinases, recruiting Syk/ZAP70 for downstream signaling .

  • Inhibition: Paradoxically, DAP12-MAIR-II complexes suppress B cell receptor (BCR)- and TLR-mediated activation by recruiting SHP-1 phosphatase .

In Vitro Studies

ParameterDAP12-Deficient B CellsWild-Type B CellsSource
Proliferation (anti-IgM)EnhancedBaseline
Proliferation (CpG)EnhancedBaseline
SHP-1 RecruitmentAbsentPresent (via MAIR-II-DAP12)

In Vivo Observations

PhenotypeDAP12-Deficient MiceWild-Type MiceSource
Serum AutoantibodiesElevatedNormal
Germinal Center B CellsIncreased size and frequencyBaseline
Anti-NP IgG2a TitersHigher post-immunizationLower

Common Uses of DAP12 Antibodies

  • Flow Cytometry: Detects intracellular DAP12 in human CD56+ NK cells .

  • Western Blot: Identifies DAP12 in lysates (e.g., 10 kDa band in human NK cells) .

  • Immunoprecipitation: Studies protein-protein interactions .

Clinical and Therapeutic Implications

  • Autoimmunity: DAP12 deficiency exacerbates humoral responses, suggesting its role in preventing autoantibody production .

  • Cancer Immunotherapy: DAP12-coupled receptors (e.g., NKp44) are explored for NK cell activation .

  • Nasu-Hakola Disease: Loss-of-function mutations in DAP12 cause this rare genetic disorder .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
DIR12 antibody; DP1 antibody; At4g11180 antibody; F2P3.6Dirigent protein 12 antibody; AtDIR12 antibody
Target Names
DIR12
Uniprot No.

Target Background

Function
DIR12 protein plays a crucial role in plant secondary metabolism by imparting stereoselectivity to the phenoxy radical-coupling reaction. This reaction leads to the production of optically active lignans from two molecules of coniferyl alcohol. These lignans are essential building blocks for the biosynthesis of various plant compounds, including lignans, flavonolignans, and alkaloids. Notably, DIR12 is required for the accumulation of neolignans in seeds.
Database Links

KEGG: ath:AT4G11180

STRING: 3702.AT4G11180.1

UniGene: At.33582

Protein Families
Plant dirigent protein family
Subcellular Location
Secreted, extracellular space, apoplast.
Tissue Specificity
Seed coat specific expression.

Q&A

What is DAP12 and why is it important in immunological research?

DAP12 (DNAX-activation protein 12) is a transmembrane adaptor protein critical for immune cell signaling and function. It contains an immunoreceptor tyrosine-based activation motif (ITAM) that mediates signal transduction for various receptors expressed primarily on natural killer (NK) cells, monocytes, and dendritic cells. DAP12 is essential for understanding innate immune responses, as it couples to multiple activating receptors in NK cells and myeloid cells . Understanding DAP12 function has significant implications for research in autoimmunity, inflammation, and cancer immunotherapy, making DAP12 antibodies valuable tools for investigating immune signaling pathways.

What are the key applications for DAP12 antibodies in immunological research?

DAP12 antibodies are employed across multiple experimental techniques in immunology research:

ApplicationPurposeExample Protocol Elements
Flow CytometryDetection of DAP12 in CD56+ NK cellsFixed with paraformaldehyde, permeabilized with saponin
Western BlotDetection of DAP12 protein expressionReducing conditions, PVDF membrane, 5 μg/mL antibody concentration
ImmunoprecipitationIsolation of DAP12 and associated proteinsAs indicated in available DAP12 antibody protocols
ImmunohistochemistryTissue localization of DAP12 expressionVariable based on tissue preparation methods

Research applications extend beyond these techniques to include studying signaling pathways in various immune cell populations and investigating DAP12's role in disease mechanisms.

How does DAP12 antibody specificity influence experimental design?

Antibody specificity is critical when studying DAP12 due to its relatively small size (~10 kDa) and potential cross-reactivity with related signaling molecules. When designing experiments:

  • Validate antibody specificity using appropriate controls (e.g., isotype control antibody as demonstrated in flow cytometry experiments with CD56+ natural killer cells)

  • Consider the epitope recognized by the antibody (e.g., Clone #406288 targeting the specific peptide sequence QGQRSDVYSDLNTQRPYYK)

  • Verify antibody reactivity in your experimental system, as species-specific differences may exist

  • Select application-appropriate antibody formats (monoclonal vs. polyclonal)

For detecting low abundance proteins like DAP12, optimize experimental conditions including fixation, permeabilization, and antibody concentration.

What are the optimal protocols for detecting DAP12 in human NK cells via flow cytometry?

Detection of DAP12 in human NK cells requires specific methodological considerations due to its predominantly intracellular expression:

  • Sample preparation:

    • Isolate peripheral blood mononuclear cells (PBMCs) using density gradient centrifugation

    • Identify NK cells by surface staining with anti-CD56 antibodies

    • Fix cells with paraformaldehyde (typically 2-4%)

    • Permeabilize with saponin (0.1-0.5%) to allow antibody access to intracellular DAP12

  • Staining procedure:

    • Use human DAP12 monoclonal antibody (e.g., Clone #406288) at optimal concentration

    • Include appropriate isotype control antibody (e.g., MAB002) in parallel samples

    • Apply fluorophore-conjugated secondary antibody (e.g., Allophycocyanin-conjugated Anti-Mouse IgG)

    • Analyze using standard flow cytometry methods with appropriate compensation

  • Data analysis:

    • Compare signal intensity between DAP12-stained and isotype control samples

    • Gate on CD56+ population to specifically analyze NK cells

    • Consider dual parameter analysis to correlate DAP12 expression with other NK cell markers

This methodology has been validated for detecting endogenous DAP12 in primary human NK cells .

How should Western blot protocols be optimized for reliable DAP12 detection?

Detecting DAP12 by Western blot presents unique challenges due to its low molecular weight (~10 kDa). Optimize your protocol with these considerations:

  • Sample preparation:

    • Use reducing conditions to ensure proper protein denaturation

    • Consider enrichment of DAP12-expressing cells (e.g., NK cells) for stronger signal

    • Prepare samples in appropriate buffer (e.g., Immunoblot Buffer Group 1)

  • Gel electrophoresis:

    • Use higher percentage gels (15-20%) to effectively resolve low molecular weight proteins

    • Load adequate protein amount (optimize based on cell type)

    • Include appropriate molecular weight markers spanning the 10 kDa range

  • Transfer and detection:

    • Use PVDF membrane for optimal protein binding

    • Apply 5 μg/mL of Human DAP12 Monoclonal Antibody

    • Utilize HRP-conjugated secondary antibody with appropriate dilution

    • Optimize exposure time to visualize the ~10 kDa DAP12 band

  • Controls:

    • Include negative controls (e.g., mock-transfected cell lines)

    • Consider positive controls with confirmed DAP12 expression (e.g., primary human CD56+ NK cells)

This approach has successfully detected DAP12 in primary NK cells while demonstrating specificity through appropriate controls .

What considerations should be made when selecting between different DAP12 antibody clones?

When selecting a DAP12 antibody clone for research applications, consider:

  • Epitope recognition:

    • Different clones recognize distinct epitopes (e.g., Clone #406288 targets QGQRSDVYSDLNTQRPYYK)

    • Some epitopes may be inaccessible in certain applications or under specific conditions

  • Validated applications:

    • Select antibodies verified for your specific application (e.g., D7G1X Rabbit mAb for Western blot and immunoprecipitation)

    • Review scientific literature for successful application examples

  • Species reactivity:

    • Confirm cross-reactivity with your species of interest

    • Some antibodies may be human-specific while others offer broader reactivity

  • Format considerations:

    • For direct detection, consider conjugated formats

    • For amplified signal, unconjugated primary antibodies with secondary detection may be preferable

    • Recombinant antibodies may offer superior lot-to-lot consistency

  • Clone-specific performance characteristics:

    • Review data on sensitivity and specificity for each clone

    • Consider published validation data showing expected molecular weight detection (~10 kDa for DAP12)

How can DAP12 antibodies be integrated into multi-parameter immune cell phenotyping?

Advanced immune phenotyping increasingly incorporates signaling proteins like DAP12 alongside traditional surface markers:

  • Sequential staining strategies:

    • First stain for surface markers including lineage markers (CD56, CD3, etc.)

    • Fix and permeabilize cells using optimized protocols

    • Follow with DAP12 antibody staining and appropriate secondary detection

  • Multi-color panel design:

    • Include DAP12 in panels investigating NK cell or myeloid cell function

    • Select fluorophores with minimal spectral overlap

    • Incorporate functional markers (activation, exhaustion) alongside DAP12

  • Mass cytometry applications:

    • Metal-conjugated DAP12 antibodies can be integrated into CyTOF panels

    • Allows simultaneous detection of >40 parameters including DAP12

    • Enables high-dimensional analysis of signaling networks

  • Single-cell approaches:

    • Combine DAP12 detection with RNA sequencing at single-cell level

    • Correlate protein expression with transcriptional profiles

    • Apply computational analyses to identify DAP12-associated functional states

This multi-parameter approach provides contextual understanding of DAP12 expression and function within heterogeneous immune populations.

What are the key considerations for studying DAP12 signaling dynamics using antibody-based techniques?

Investigating DAP12 signaling dynamics requires specialized approaches:

  • Phosphorylation state analysis:

    • Use phospho-specific antibodies to detect activated forms of DAP12 ITAM motifs

    • Implement time-course experiments after receptor engagement

    • Combine with inhibitors of downstream signaling molecules to map pathways

  • Proximity ligation assays (PLA):

    • Detect protein-protein interactions between DAP12 and associated receptors

    • Requires pairs of antibodies targeting DAP12 and its binding partners

    • Provides spatial resolution of signaling complexes

  • Immunoprecipitation-based signaling studies:

    • Use DAP12 antibodies for pull-down experiments

    • Analyze co-precipitating proteins by mass spectrometry

    • Identify novel signaling partners or post-translational modifications

  • Live cell imaging approaches:

    • Combine DAP12 antibody fragments with fluorescent proteins

    • Track signaling complex formation in real-time

    • Correlate with functional outputs (calcium flux, cytokine production)

These techniques reveal temporal and spatial aspects of DAP12 signaling, providing insights into immune cell activation mechanisms.

How can antibody cross-reactivity issues be addressed when studying DAP12 in different species?

Cross-reactivity considerations are particularly important when studying DAP12 across species:

  • Species validation strategies:

    • Test antibody reactivity on samples from target species

    • Compare with known positive controls (e.g., human NK cells for human-reactive clones)

    • Verify detection at the expected molecular weight (~10 kDa)

  • Epitope conservation analysis:

    • Align DAP12 protein sequences across species

    • Identify conserved regions that may enable cross-reactivity

    • Select antibodies targeting highly conserved epitopes for cross-species applications

  • Alternative approaches for poorly cross-reactive antibodies:

    • Use species-specific antibodies when available

    • Consider epitope tagging of DAP12 in model systems

    • Implement mRNA detection methods as complementary approaches

  • Validation in heterologous expression systems:

    • Express species-specific DAP12 variants in control cell lines

    • Test antibody reactivity against expressed proteins

    • Quantify relative affinity across species variants

Thorough validation prevents misinterpretation of data when studying DAP12 in comparative immunology or animal models.

How are next-generation antibody discovery techniques advancing DAP12 research?

Recent technological developments are transforming antibody discovery for targets like DAP12:

  • Deep screening approaches:

    • Ultra-high-throughput methods combining next-generation sequencing with affinity screening

    • Process up to 100 million individual antibody-antigen interactions in a single experiment

    • Achieve 2000-fold improvements in affinity and 35,000-fold increases in potency

  • Machine learning applications:

    • Training large language models on antibody-antigen binding datasets

    • Generating novel antibody sequences with improved binding properties

    • Accelerating discovery of antibodies not found in nature

  • Single B-cell isolation techniques:

    • Direct isolation of B cells producing DAP12-specific antibodies

    • Rapid cloning of naturally occurring antibody sequences

    • Preservation of native heavy and light chain pairing

  • Structural biology integration:

    • Crystal structures of antibody-DAP12 complexes informing epitope selection

    • Cryo-EM analysis of larger signaling complexes

    • Structure-guided antibody engineering for improved specificity

These approaches reduce development timelines from months to days while generating comprehensive sequence-function correlation data .

What are the methodological approaches for using DAP12 antibodies in tissue-based immunological research?

Investigating DAP12 expression and function in tissue contexts requires specialized methodologies:

  • Multiplex immunohistochemistry/immunofluorescence:

    • Combine DAP12 antibodies with lineage and functional markers

    • Implement tyramide signal amplification for detecting low-abundance signaling proteins

    • Use spectral unmixing to resolve multiple markers in tissue sections

  • Tissue optimization protocols:

    • Test multiple fixation methods (formalin, ethanol, acetone)

    • Optimize antigen retrieval conditions (heat, pH, enzymatic)

    • Validate specificity using appropriate tissue controls

  • In situ proximity ligation:

    • Detect DAP12 interactions with receptor partners directly in tissue

    • Visualize signaling complexes with cellular and anatomical context

    • Quantify interaction frequencies in different tissue regions

  • Spatial transcriptomics correlation:

    • Combine DAP12 protein detection with spatial gene expression analysis

    • Correlate protein levels with transcriptional programs

    • Identify tissue niches with active DAP12 signaling

These approaches provide insights into DAP12 function within the complex microenvironment of tissues, extending beyond isolated cell studies.

How can researchers optimize protocols for studying post-translational modifications of DAP12 using antibody-based methods?

DAP12 function is regulated by post-translational modifications (PTMs), particularly phosphorylation of ITAM tyrosines:

  • Phospho-specific antibody applications:

    • Select antibodies specifically recognizing phosphorylated ITAM motifs

    • Implement rapid sample processing to preserve labile phosphorylation

    • Use phosphatase inhibitors during sample preparation

  • Antibody-based enrichment for PTM analysis:

    • Immunoprecipitate DAP12 using validated antibodies

    • Analyze enriched samples by mass spectrometry

    • Identify and quantify multiple PTMs simultaneously

  • Temporal dynamics studies:

    • Implement precise time-course experiments after receptor stimulation

    • Use phospho-flow cytometry for single-cell phosphorylation analysis

    • Correlate DAP12 phosphorylation with downstream signaling events

  • Multiplexed PTM detection:

    • Combine antibodies detecting different PTMs on DAP12

    • Implement sequential staining protocols to avoid antibody interference

    • Quantify relative abundance of differently modified DAP12 pools

This methodological framework enables characterization of the dynamic PTM landscape regulating DAP12 function in various immunological contexts.

What emerging applications of DAP12 antibodies are expected to advance immunological research?

The field of DAP12 research continues to evolve with several promising future directions:

  • Single-cell multi-omics integration:

    • Combining antibody-based DAP12 detection with transcriptomics and metabolomics

    • Correlating protein expression with dynamic cellular states

    • Building comprehensive models of DAP12 signaling networks

  • Therapeutic applications:

    • Developing antibodies modulating DAP12-dependent pathways

    • Engineering bispecific antibodies targeting DAP12-associated receptors

    • Exploring DAP12 pathway manipulation for immunotherapy approaches

  • In vivo imaging:

    • Adapting DAP12 antibodies for non-invasive imaging

    • Tracking immune cell populations with active DAP12 signaling

    • Monitoring therapeutic responses through DAP12-dependent pathways

  • Synthetic immunology applications:

    • Engineering cells with modified DAP12 signaling properties

    • Creating tunable immune cell responses through DAP12 pathway manipulation

    • Developing cellular therapies with enhanced or controlled DAP12 function

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