DML2 Antibody

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Description

Clarification of Terminology

  • DML2 (DEMETER-LIKE PROTEIN 2): A DNA glycosylase in Arabidopsis thaliana involved in active DNA demethylation. It excises 5-methylcytosine to regulate epigenetic stability . No antibodies targeting DML2 are described in the provided sources.

  • DMXL2 (DmX-like protein 2): A synaptic vesicle scaffold protein involved in neuronal and endocrine homeostasis. Altered DMXL2 expression is linked to hormonal therapy-resistant breast cancer and polycystic ovary syndrome (PCOS) .

DMXL2 Antibody (ab122552)

The only antibody explicitly named in the search results is ab122552, a rabbit polyclonal antibody targeting DMXL2. Key features include:

ParameterDetails
Host SpeciesRabbit
ReactivityHuman
ApplicationsImmunohistochemistry (IHC-P)
ImmunogenRecombinant fragment (Human DMXL2 amino acids 1900–2050)
ValidationCited in 3 publications; tested for IHC-P in human testis tissue
Commercial AvailabilitySold by Abcam for research use only (not for diagnostic/therapeutic use)

Functional Insights into DMXL2

  • Role in Cancer: DMXL2 drives epithelial-to-mesenchymal transition (EMT) in hormonal therapy-resistant breast cancer via Notch hyperactivation .

  • Neurological Function: Acts as a scaffold for MADD and RAB3GAP on synaptic vesicles, critical for neuronal homeostasis .

Comparative Analysis of Antibody Performance

While no DML2-specific antibodies are documented, the search results highlight methodologies for evaluating antibody efficacy, which could apply to DMXL2 or similar targets:

Antibody FeatureDMXL2 Antibody (ab122552)Anti-DENV-2 MAbs Anti-D Monoclonals
SpecificityHuman DMXL2DENV-2 epitopesRhD antigen
NeutralizationN/APRNT₅₀ < 200 ng/ml FcγRIIIa-mediated ADCC
Therapeutic PotentialResearch use onlyPostexposure therapy Prevents D-immunization

Research Gaps and Recommendations

  1. DML2 Antibody Development: No studies in the provided sources describe antibodies against Arabidopsis DML2. Future work could explore generating such antibodies using recombinant DML2 epitopes.

  2. DMXL2 Clinical Relevance: Further studies are needed to validate DMXL2's role in cancer and endocrine disorders using knock-out models or therapeutic inhibitors.

Key Citations

  1. DNA demethylation by DML enzymes in Arabidopsis .

  2. DMXL2 antibody validation and applications .

  3. Antibody neutralization mechanisms (e.g., DENV-2 MAbs) .

Product Specs

Buffer
Preservative: 0.03% ProClin 300; Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
14-16 weeks (Made-to-order)
Synonyms
DML2 antibody; At3g10010 antibody; T22K18.18DEMETER-like protein 2 antibody; EC 3.2.2.- antibody
Target Names
DML2
Uniprot No.

Target Background

Function
A potential transcriptional activator that may function via nicking of the target promoter. It catalyzes the release of 5-methylcytosine (5-meC) from DNA through a glycosylase/lyase mechanism.
Gene References Into Functions
PMID: 18493721, https://www.ncbi.nlm.nih.gov/pubmed/18493721, Research indicates that DML2 is essential not only for the removal of DNA methylation marks from inappropriately methylated cytosines but also for the maintenance of high methylation levels at correctly targeted sites., .
Database Links

KEGG: ath:AT3G10010

STRING: 3702.AT3G10010.1

UniGene: At.40005

Protein Families
DNA glycosylase family, DEMETER subfamily
Subcellular Location
Nucleus.

Q&A

Basic Research Questions

  • What is the DLK2/EGFL9 Antibody and what is its target specificity?

    The Human DLK2/EGFL9 Antibody (Clone # 908866R) is a monoclonal antibody specifically targeting the human DLK2/EGFL9 protein region from Asp27 to Ser306 (Accession # Q6UY11). This antibody functions primarily as an ELISA detection antibody when paired with Mouse Anti-Human DLK2/EGFL9 Monoclonal Antibody (Catalog # MAB9756). The antibody is specifically designed for assay development across various platforms requiring antibody pairs for optimal detection of the target protein .

  • What are the primary research applications for DLK2/EGFL9 Antibody?

    The principal application of DLK2/EGFL9 Antibody is in ELISA-based detection systems. The antibody functions effectively when used as part of a detection pair in sandwich ELISA configurations. Methodologically, researchers typically immobilize a capture antibody (Mouse Anti-Human DLK2/EGFL9 Monoclonal Antibody) on a microplate surface, followed by sample addition and subsequent detection using the biotinylated DLK2/EGFL9 Antibody. This creates a sensitive detection system visualized through Streptavidin-HRP and appropriate substrate solutions. The antibody's specificity makes it valuable for quantitative analysis of DLK2/EGFL9 in experimental research settings .

  • How should researchers optimize DLK2/EGFL9 Antibody dilutions for experimental protocols?

    Optimization of DLK2/EGFL9 Antibody dilutions requires systematic methodological approach:

    a) Perform initial titration experiments using a broad dilution range (typically 1:500 to 1:5000)

    b) Assess signal-to-noise ratio at each dilution point to determine optimal working concentration

    c) Validate antibody performance at the selected dilution using positive and negative controls

    d) Consider that optimal dilutions may vary between applications and detection systems

    e) Document batch-to-batch variation by maintaining detailed records of optimization experiments

    Note that each laboratory should determine optimal dilutions for their specific experimental conditions, as effectiveness may vary depending on sample type, detection system, and experimental variables .

  • What validation methods should be employed to confirm DLK2/EGFL9 Antibody specificity?

    Comprehensive validation of DLK2/EGFL9 Antibody specificity should include:

    a) Standard curve analysis using recombinant Human DLK2/EGFL9 protein with serial dilutions

    b) Western blot confirmation showing appropriate molecular weight band recognition

    c) Competitive inhibition assays using purified antigen to demonstrate specific binding

    d) Cross-reactivity testing against structurally similar proteins to confirm target specificity

    e) Comparison of signal between known positive and negative samples

    f) Evaluation of non-specific binding through appropriate negative controls

    g) Testing antibody performance across different sample types to ensure consistent results

    These methodological approaches ensure that experimental findings accurately reflect true DLK2/EGFL9 levels rather than artifacts or cross-reactive signals .

Practical Research Applications

  • What are the considerations for using DLK2/EGFL9 Antibody in multiplex detection systems?

    Implementation of DLK2/EGFL9 Antibody in multiplex detection systems requires methodological consideration of:

    a) Cross-reactivity: Extensive validation against all targets in the multiplex panel

    b) Signal normalization: Development of appropriate standards for quantitative analysis

    c) Antibody conjugation: Selection of compatible fluorophores or detection tags

    d) Blocking optimization: Identification of blocking agents that minimize background across all assay components

    e) Capture surface selection: Evaluation of surface chemistries for optimal antibody orientation

    f) Dynamic range: Ensuring detection sensitivity across physiologically relevant concentration ranges

    g) Sample matrix effects: Validation with complex biological samples

    h) Data analysis algorithms: Development of appropriate signal processing for accurate quantification

    These considerations ensure reliable multiparameter analysis in complex research applications .

  • How can researchers integrate DLK2/EGFL9 detection into broader signaling pathway analysis?

    Methodological approaches for integrating DLK2/EGFL9 detection into signaling pathway analysis include:

    a) Temporal profiling: Measure DLK2/EGFL9 levels at multiple time points following pathway stimulation

    b) Pharmacological intervention: Combine antibody detection with pathway inhibitors to establish causal relationships

    c) Correlative analysis: Parallel measurement of DLK2/EGFL9 with established pathway markers

    d) Genetic manipulation: Assess DLK2/EGFL9 levels following gene silencing or overexpression of pathway components

    e) Subcellular localization: Combine immunodetection with fractionation to determine protein translocation

    f) Phosphorylation state: Develop phospho-specific antibodies to assess activation status

    g) Protein-protein interactions: Combine immunoprecipitation with DLK2/EGFL9 detection

    h) Systems biology integration: Incorporate quantitative data into pathway modeling

    This integrated approach provides mechanistic insights beyond simple protein quantification .

  • What are the future research directions for antibody engineering using computational approaches?

    Emerging research directions in computational antibody engineering include:

    a) Target-specific optimization: Training models on antibodies known to bind specific targets

    b) Epitope-focused design: Generating antibodies predicted to bind predetermined epitopes

    c) Multi-parameter optimization: Simultaneously optimizing binding affinity, specificity, and developability

    d) Affinity maturation simulation: Computational mimicking of somatic hypermutation

    e) Therapeutic index improvement: Designing antibodies with reduced off-target effects

    f) Cross-species reactivity engineering: Creating antibodies that bind orthologous targets

    g) Integration with structural biology: Leveraging growing databases of antibody-antigen complexes

    h) Artificial intelligence-driven discovery: Expanding the "druggable" antigen space to targets refractory to conventional antibody discovery methods

    These approaches represent the cutting edge of antibody engineering, with potential to revolutionize both research applications and therapeutic development through "accelerating in-silico discovery of antibody-based biotherapeutics and expanding the druggable antigen space" .

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