DNER Antibody

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Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
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Synonyms
bet antibody; Brain EGF repeat-containing transmembrane protein antibody; Bret antibody; Delta and Notch-like epidermal growth factor-related receptor antibody; Delta notch like EGF repeat containing transmembrane antibody; Delta/notch like EGF repeat containing antibody; Delta/notch-like EGF-related receptor antibody; Dner antibody; DNER_HUMAN antibody; PRO299 antibody; Transmembrane protein Bet antibody; UNQ26 antibody
Target Names
DNER
Uniprot No.

Target Background

Function
DNER Antibody is an activator of the NOTCH1 pathway, potentially mediating neuron-glia interaction during astrocytogenesis.
Gene References Into Functions
  1. A quantum dot-based immunofluorescent imaging and quantitative analytical system (QD-IIQAS) has been developed as a simple and accurate method for assessing DNER expression. This study found that DNER expression is an independent prognostic factor in prostate cancer. PMID: 29843212
  2. This research revealed an unexpected transcriptional repression function of the BET bromodomain and identified a novel mechanism for TAZ upregulation. PMID: 27717711
  3. Findings suggest that targeting BET proteins for degradation represents a promising therapeutic strategy for the treatment of Triple-negative breast cancers (TNBC). PMID: 28209615
  4. DNER is not a Notch ligand. PMID: 27622512
  5. This review discusses the structural biology of BET family BDs and their applications in major diseases. PMID: 27240990
  6. A study in a Chinese Han population found that the rs1861612 C to T change and variant T genotype may contribute to Type 2 Diabetes Mellitus (T2DM). PMID: 25300688
  7. These studies suggest that DNER is a susceptibility gene for T2DM in American Indians. PMID: 24101674
  8. Data indicates that clathrin-independent endocytosis is crucial for the polarized targeting of somatodendritic proteins, including DNER. PMID: 20367751
  9. Inhibition of DNER protein resulted in increased adipocyte maturation, partly due to reduced cell proliferation through an increase in CCAAT-Enhancer-Binding Protein-delta expression. PMID: 20070733
  10. DNER is expressed in both developing and mature central nervous systems. PMID: 11950833

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Database Links

HGNC: 24456

OMIM: 607299

KEGG: hsa:92737

STRING: 9606.ENSP00000345229

UniGene: Hs.234074

Subcellular Location
Cell membrane; Single-pass type I membrane protein.
Tissue Specificity
Expressed in brain, spinal cord and adrenal gland.

Q&A

What is DNER and what role do anti-Tr/DNER antibodies play in neurological disorders?

Delta/Notch-like epidermal growth factor-related receptor (DNER) is the target antigen of anti-Tr antibodies, which are strongly associated with paraneoplastic cerebellar degeneration (PCD). DNER is primarily expressed in Purkinje cells of the cerebellum, and anti-Tr antibodies specifically bind to the extracellular domain of this receptor .

In neurological contexts, anti-Tr/DNER antibodies are predominantly associated with rapidly progressive cerebellar ataxia. This condition presents most commonly in middle-aged males and shows a strong association with Hodgkin lymphoma in approximately 91% of cases . The presence of these antibodies should prompt thorough oncological screening, particularly for Hodgkin lymphoma, even in the absence of obvious cancer symptoms.

What methodological approaches exist for detecting anti-Tr/DNER antibodies in clinical samples?

Two primary methodological approaches are currently employed:

  • Tissue-based indirect immunofluorescence assay (IFA): Traditional method using monkey cerebellum sections that identifies the characteristic punctate staining pattern in the molecular layer and coarse granular staining of Purkinje cell cytoplasm. This method requires expertise to interpret and may miss low-titer antibodies .

  • Recombinant cell-based indirect immunofluorescence assay (RC-IFA): More sensitive method using HEK293 cells expressing recombinant DNER. This approach has demonstrated 100% sensitivity (95% CI 92.8%–100%) and 100% specificity (95% CI 98.7%–100%) in validated studies .

Research indicates RC-IFA is superior for detecting low-titer antibodies, with studies showing that tissue-based assays failed to detect anti-Tr antibodies in 4 samples that were positive by RC-IFA .

What is the demographic and clinical profile of patients with anti-Tr/DNER antibody-associated disorders?

Based on systematic reviews of the literature, the demographic and clinical characteristics include:

  • Predominance in middle-aged males

  • Isolated cerebellar ataxia as the most common presentation (92% of cases)

  • Rare extracerebellar manifestations (8% of cases)

  • High association with tumors (91% of cases), with Hodgkin lymphoma being the most common

Neuroimaging findings typically reveal cerebellar atrophy (19%) or cerebellar hypersignal (6%) . Cerebrospinal fluid analysis shows inflammatory markers in 64% of patients, reflecting the immune-mediated nature of the condition.

How do anti-Tr/DNER antibodies compare with other paraneoplastic autoantibodies in terms of detection challenges?

Anti-Tr/DNER antibodies present unique detection challenges compared to other paraneoplastic antibodies like anti-Hu, Yo, or Ri. The characteristic immunofluorescence pattern of anti-Tr antibodies requires experienced interpretation, and some laboratories use additional epitope blocking steps for confirmation, which is impractical in routine diagnostic settings .

Unlike other onconeural antibodies that typically target intracellular antigens, anti-Tr antibodies bind to the extracellular domain of DNER, which offers different experimental approaches for detection and functional studies . The relatively recent identification of DNER as the target antigen has enabled the development of more standardized detection methods compared to the historical reliance on tissue-based assays.

Research indicates that integration of anti-DNER testing into multiplex assays alongside other paraneoplastic markers (Hu, Yo, Ri, CV2) would be beneficial for comprehensive screening .

What experimental evidence supports the pathogenic role of anti-Tr/DNER antibodies?

  • Epitope specificity: Anti-Tr antibodies bind specifically to the extracellular domain of DNER, demonstrating epitope specificity characteristic of pathogenic autoantibodies

  • Temporal association: The antibodies typically appear before or concurrent with neurological symptoms and may decrease with successful tumor treatment

  • Preadsorption studies: Preadsorption of patient sera with either recombinant full-length DNER or its extracellular domain selectively abolishes anti-Tr reactivity, confirming antigenic specificity

Unlike anti-NMDAR encephalitis, where direct evidence of antibody-mediated receptor internalization and synaptic dysfunction exists, similar detailed mechanisms for anti-Tr/DNER have not been as thoroughly elucidated in the current literature .

What technical considerations should researchers address when implementing RC-IFA for anti-Tr/DNER detection?

Researchers implementing RC-IFA for anti-Tr/DNER detection should consider:

  • Appropriate controls: Include HEK293 control cells expressing other antigens (like CDR2/Yo and CDR2L) and mock-transfected HEK293 cells to ensure specificity of detection

  • Expression system optimization: Ensure optimal expression of the full-length DNER or its extracellular domain in HEK293 cells

  • Substrate preparation: Standardized dried test systems have shown excellent performance compared to freshly prepared substrates

  • Sample testing hierarchy: Testing both serum and CSF can increase detection sensitivity, with CSF potentially showing higher antibody specificity in some cases

  • Result interpretation: Establish clear criteria for positive versus negative results, particularly for samples with low antibody titers

What is the relationship between oncological and neurological outcomes in anti-Tr/DNER antibody-positive patients?

An intriguing aspect of anti-Tr/DNER antibody-associated disorders is the disconnect between oncological and neurological outcomes:

  • Oncological response to treatment is excellent, with complete response in approximately 88% of patients

  • Neurological prognosis remains poor, with only 41% of patients showing significant improvement in cerebellar symptoms despite successful tumor therapy

This dissociation suggests that once initiated, the immune-mediated neurological damage may progress independently of the triggering neoplasm. Research questions remain regarding the mechanisms underlying this phenomenon and potential therapeutic interventions that might improve neurological outcomes.

How can researchers distinguish between anti-Tr/DNER antibodies and other cerebellar-targeting autoantibodies?

Distinguishing between anti-Tr/DNER and other cerebellar-targeting antibodies requires a multi-tiered approach:

  • Immunohistochemical pattern analysis: Anti-Tr produces a characteristic punctate staining of the molecular layer and coarse granular staining of Purkinje cell cytoplasm, distinct from anti-Yo and other antibodies

  • Recombinant cell-based assays: RC-IFA using DNER-expressing cells provides definitive identification, as demonstrated in studies showing 100% specificity with no cross-reactivity from other antibodies (including anti-Yo)

  • Preadsorption studies: For ambiguous cases, preadsorption with recombinant DNER can confirm specificity by abolishing reactivity in true anti-Tr/DNER positive samples

  • Combined testing: In research settings, parallel testing with multiple antigen substrates (DNER, CDR2/Yo, CDR2L) can provide clear differentiation

What approaches can be used to study the functional impact of anti-Tr/DNER antibodies on neuronal physiology?

Researchers investigating the functional impact of anti-Tr/DNER antibodies might consider:

  • Primary neuronal cultures: Exposing cerebellar neurons (particularly Purkinje cells) to purified patient IgG to observe effects on DNER expression, localization, and turnover

  • Electrophysiological studies: Patch-clamp recordings of Purkinje cells after antibody exposure to identify potential alterations in neuronal excitability or synaptic transmission

  • Receptor internalization assays: Quantitative assessment of DNER surface expression after antibody binding to determine if receptor internalization occurs similar to other neuronal surface antibodies

  • Animal models: Passive transfer of purified antibodies to animal models with assessment of cerebellar function through behavioral testing

  • Molecular signaling studies: Investigation of downstream Notch signaling pathways potentially affected by antibody binding to DNER

What are the critical unanswered questions regarding anti-Tr/DNER antibody pathogenesis?

Several critical questions remain unanswered:

  • Antibody production triggers: The precise mechanisms initiating anti-DNER antibody production in Hodgkin lymphoma patients remain unclear

  • Blood-brain barrier penetration: How anti-Tr antibodies access the central nervous system and specifically target cerebellar Purkinje cells requires further investigation

  • Pathogenic mechanisms: Whether anti-Tr antibodies cause neuronal dysfunction through receptor internalization, blocking of ligand binding, complement activation, or other mechanisms remains to be fully elucidated

  • Prognostic biomarkers: Identification of biomarkers that could predict neurological outcomes in antibody-positive patients

  • Therapeutic interventions: Development of targeted immunotherapies that might improve neurological outcomes beyond tumor removal

How might research into anti-Tr/DNER antibodies inform broader understanding of autoantibody-mediated neurological disorders?

Research into anti-Tr/DNER antibodies has potential to advance understanding of:

  • Paraneoplastic immunity: Insights into how peripheral tumors trigger immunity against neuronal antigens

  • Cerebellar vulnerability: Understanding why Purkinje cells are particularly susceptible to immune-mediated damage

  • Notch signaling pathways: Given DNER's role in Notch signaling, understanding how antibody binding affects these crucial developmental and maintenance pathways

  • Therapeutic resistance: Elucidating why neurological symptoms often persist despite successful tumor treatment and standard immunotherapies

  • Cross-disease mechanisms: Comparing mechanisms with other antibody-mediated conditions like anti-NMDAR encephalitis may reveal common pathways amenable to therapeutic intervention

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