DRIP1 Antibody

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Description

Function of DRIP1 in Plant Stress Responses

DRIP1 interacts with the transcription factor DREB2A, which regulates drought- and heat-stress-responsive genes in Arabidopsis. DRIP1 facilitates the ubiquitination and subsequent degradation of DREB2A via the 26S proteasome, ensuring tight control over stress signaling under non-stressed conditions .

Key findings:

  • Ubiquitination mechanism: DRIP1 binds to the N-terminal region of DREB2A (residues 1–165) .

  • Stress-specific regulation: Under dehydration or heat stress, DRIP1-mediated degradation of DREB2A is counteracted, allowing DREB2A accumulation to activate stress-response genes like HsfA3 and RD29B .

Experimental Applications of DRIP1 Antibody

While commercial DRIP1 antibodies are not explicitly detailed in the provided sources, research-grade tools (e.g., custom antibodies or tagged constructs) have been critical for:

In Vitro Ubiquitination Assays

ComponentRole in AssayOutcome
DRIP1-GST fusionE3 ligaseMediates DREB2A ubiquitination in the presence of E1/E2 enzymes .
DREB2A-His-TrxSubstrateShows shifted bands (~8 kDa increase) upon ubiquitination .
DRIP1 ΔRING mutantNegative controlLacks ubiquitination activity, confirming RING domain necessity .

Subcellular Localization

  • Bimolecular Fluorescence Complementation (BiFC):

    • DRIP1-YFP and DREB2A-YFP fusions interact in plant nuclei, confirmed by fluorescence in onion epidermal cells .

Mutant Phenotype Analysis

  • drip1/drip2 mutants: Show enhanced accumulation of DREB2A under stress, leading to dwarfism when DREB2A is overexpressed .

DREB2A Protein Accumulation in Mutants

GenotypeDehydration StressHeat Stress
Wild-type (Col)LowLow
drip12.5x increase3x increase
drip1 drip24x increase4.5x increase

Data derived from immunoblot analysis using anti-DREB2A antibody .

Technical Notes on Antibody Usage

  • Cross-reactivity: DRIP1 antibodies (where used) are typically validated for Arabidopsis and may require customization for other species.

  • Detection methods: Western blotting, immunoprecipitation, and fluorescence-based assays (e.g., BiFC) are common .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
DRIP1 antibody; At1g06770 antibody; F4H5.14E3 ubiquitin protein ligase DRIP1 antibody; EC 2.3.2.27 antibody; DREB2A-interacting protein 1 antibody; RING-type E3 ubiquitin transferase DRIP1 antibody
Target Names
DRIP1
Uniprot No.

Target Background

Function
DRIP1 is an E3 ubiquitin-protein ligase that acts as a negative regulator of the response to water stress. It mediates ubiquitination and subsequent proteasomal degradation of the drought-induced transcriptional activator DREB2A. DRIP1 functions redundantly with DRIP2.
Gene References Into Functions
  1. BMI1b expression and role in plant development PMID: 27837089
  2. DRIP1 and DRIP2 act as novel negative regulators in drought-responsive gene expression by targeting DREB2A to 26S proteasome proteolysis: [DRIP1] PMID: 18552202
Database Links

KEGG: ath:AT1G06770

STRING: 3702.AT1G06770.1

UniGene: At.28756

Subcellular Location
Nucleus.
Tissue Specificity
Expressed in roots, leaves and flowers.

Q&A

What is DRIP1 and why is it significant in research?

DRIP1 has been linked to dopamine signaling pathways and may play an important role in the pathogenesis of neuropsychiatric disorders, including schizophrenia and bipolar disorder. Research indicates that DRIP1, along with C14ORF28, GNB2L1, MLLT3, DRD2, and DARPP-32, shows correlated expression patterns in these conditions, with DRD2 potentially serving as an initial trigger in disease pathogenesis . Understanding DRIP1's function requires specific antibodies that can reliably detect and quantify this protein across various experimental platforms.

What types of DRIP1 antibodies are commercially available?

Currently, polyclonal rabbit antibodies against DRIP1 are available from commercial suppliers. For example, Bioss offers a rabbit polyclonal antibody (catalog number BS-9618R) that demonstrates reactivity against human, mouse, and rat DRIP1 . When selecting an antibody, researchers should consider:

Antibody PropertySpecifications for Available DRIP1 Antibody
HostRabbit
ClonalityPolyclonal
IsotypeIgG
ReactivityHuman, Mouse, Rat
ApplicationsWestern Blot, IHC-P, Immunofluorescence
Dilution RangesWB (1:100-1000), IHC-P (1:100-500), IF (1:50-200)

How should I validate a DRIP1 antibody before incorporating it into my experimental workflow?

Antibody validation is critical for ensuring experimental reproducibility. For DRIP1 antibodies, validation should include:

  • Positive controls using tissues/cells known to express DRIP1

  • Negative controls using knockout or knockdown models when available

  • Secondary-antibody-only controls to assess non-specific binding

  • Literature review to understand DRIP1 expression profiles in your model system

For comprehensive validation, test your antibody across multiple applications (WB, IF, IHC) to confirm specificity in each context. The use of isogenic knockout cell lines as controls has proven particularly valuable for antibody validation, as demonstrated in studies with other proteins like TBK1 .

What are the optimal conditions for Western blotting with DRIP1 antibodies?

When performing Western blotting with DRIP1 antibodies, consider the following protocol optimization steps:

  • Sample preparation: Use RIPA or NP-40 buffer with protease inhibitors

  • Protein loading: 20-50 μg of total protein per lane

  • Transfer conditions: Semi-dry or wet transfer (30V overnight for larger proteins)

  • Blocking: 5% non-fat milk or BSA in TBST for 1 hour at room temperature

  • Primary antibody: Dilute DRIP1 antibody at 1:100-1:1000 in blocking buffer

  • Incubation: Overnight at 4°C with gentle rocking

  • Detection: HRP-conjugated secondary antibody with ECL detection system

Always include positive and negative controls to validate specificity, as non-specific binding can lead to misinterpretation of results .

How can I optimize immunofluorescence protocols with DRIP1 antibodies?

For optimal immunofluorescence results with DRIP1 antibodies:

  • Fixation: 4% paraformaldehyde for 15 minutes at room temperature

  • Permeabilization: 0.1% Triton X-100 for 10 minutes

  • Blocking: 5% normal serum (matching secondary antibody host) for 1 hour

  • Primary antibody: Dilute DRIP1 antibody at 1:50-1:200

  • Incubation: 1-2 hours at room temperature or overnight at 4°C

  • Secondary antibody: Fluorophore-conjugated antibody at 1:500-1:1000

  • Counterstaining: DAPI for nuclear visualization

  • Mounting: Anti-fade mounting medium

A mosaic culture approach—mixing wild-type and DRIP1-knockout cells on the same coverslip—can provide an excellent internal control for antibody specificity .

What strategies should I employ for troubleshooting weak DRIP1 antibody signals?

If experiencing weak or absent signals with DRIP1 antibodies:

  • Increase antibody concentration: Try higher concentrations within the recommended range (1:50-1:100 for IF)

  • Extend incubation time: Overnight at 4°C may improve signal compared to shorter incubations

  • Enhance antigen retrieval: For fixed tissues, optimize antigen retrieval methods (heat vs. enzymatic)

  • Reduce washing stringency: Use gentler washing conditions to preserve antibody-antigen binding

  • Switch detection systems: Try more sensitive detection methods (e.g., tyramide signal amplification)

  • Check sample preparation: Ensure your protein extraction method preserves DRIP1 epitopes

  • Evaluate protein expression levels: DRIP1 may be expressed at low levels in your system

How can DRIP1 antibodies be utilized to investigate neuropsychiatric disorders?

DRIP1 and associated proteins (including GNB2L1, MLLT3, DRD2 and DARPP-32) have been implicated in the pathogenesis of schizophrenia and bipolar disorder, with evidence suggesting shared disease mechanisms linked to dopamine signaling . Research approaches may include:

  • Comparative expression analysis: Use DRIP1 antibodies to quantify expression differences between patient-derived and control samples

  • Co-localization studies: Combine DRIP1 antibodies with markers for dopamine signaling components

  • Post-translational modification assessment: Investigate phosphorylation states in disease conditions

  • Protein-protein interaction studies: Employ DRIP1 antibodies in co-immunoprecipitation experiments to identify interaction partners

  • Brain region-specific expression: Map DRIP1 distribution across neural circuits implicated in psychiatric disorders

What are the latest approaches for developing new, more specific DRIP1 antibodies?

Recent advances in antibody design technology are revolutionizing antibody development:

  • AI-driven protein design: Tools like RFdiffusion are being fine-tuned to design human-like antibodies de novo, with experimental validation confirming binding to specific epitopes

  • Single-domain antibodies: Computational approaches now allow for atomically accurate design of antibody variable heavy chains (VHHs) that bind user-specified epitopes

  • Epitope-focused strategies: Differential antigen disruption methods can classify antibodies according to epitope-binding properties, enabling systematic exploration of functions

  • Structure-guided design: Cryo-EM structures of designed antibodies bound to targets are showing near-identical configurations to design models, validating computational approaches

These advances could potentially be applied to develop next-generation DRIP1 antibodies with enhanced specificity and binding properties.

How should I analyze contradictory results obtained with different DRIP1 antibodies?

When faced with conflicting results using different DRIP1 antibodies:

  • Compare epitope information: Determine if antibodies recognize different regions of DRIP1

  • Validate each antibody: Perform comprehensive validation with appropriate controls

  • Cross-reference with orthogonal techniques: Confirm findings using non-antibody methods (e.g., RNA-seq, mass spectrometry)

  • Check for post-translational modifications: Some antibodies may be sensitive to phosphorylation or other modifications

  • Evaluate experimental conditions: Different buffers or fixatives may affect epitope accessibility

  • Consider isoform specificity: Determine if your antibodies recognize specific DRIP1 isoforms

  • Consult literature: Examine if similar discrepancies have been reported

A structured validation approach comparing multiple antibodies against controls (e.g., knockout samples) can help resolve contradictions .

What positive and negative controls are essential when using DRIP1 antibodies?

Proper controls are critical for interpreting DRIP1 antibody results:

Control TypePurposeImplementation
Positive ControlConfirms antibody functionality- Tissues/cells known to express DRIP1
- Recombinant DRIP1 protein
- Overexpression systems
Negative ControlAssesses non-specific binding- DRIP1 knockout cells/tissues
- DRIP1 knockdown samples
- Secondary antibody only
Loading ControlEnsures equal sample loading- Housekeeping proteins (β-actin, GAPDH)
- Total protein stain (Ponceau S)
Isotype ControlEvaluates host-specific background- Non-specific IgG from same host species

Implementing isogenic knockout cell lines as controls has become a gold standard for antibody validation, as demonstrated with other proteins .

How can I quantitatively assess DRIP1 antibody specificity across different applications?

Quantitative assessment of antibody specificity involves multiple complementary approaches:

  • Signal-to-noise ratio: Compare signal intensity between positive samples and negative controls

  • Competitive binding assays: Pre-incubate antibody with purified antigen to block specific binding

  • Multiple antibody comparison: Test several antibodies targeting different DRIP1 epitopes

  • Western blot band profile: Confirm the observed molecular weight matches the predicted size

  • Immunoprecipitation-mass spectrometry: Identify proteins captured by the antibody

  • Mosaic culture imaging: Mix labeled wild-type and knockout cells to directly compare specificity in the same field of view

For standardized reporting, document all validation steps according to established antibody reporting guidelines.

What are the best practices for quantifying DRIP1 expression in immunoblotting experiments?

For accurate quantification of DRIP1 by Western blotting:

  • Use a standard curve: Include a dilution series of recombinant DRIP1 or positive control lysate

  • Ensure linear detection range: Verify signal is within the linear range of your detection system

  • Normalize properly: Use housekeeping proteins or total protein staining (preferred)

  • Replicate measurements: Perform at least three independent experiments

  • Consider appropriate software: Use ImageJ or similar programs with background subtraction

  • Apply statistical analysis: Employ appropriate statistical tests for comparing expression levels

  • Account for antibody affinity: Different lots may have varying affinities affecting quantification

Present quantifications with appropriate error bars and statistical significance indicators.

How should I interpret differences in DRIP1 localization patterns across cell types or tissues?

When analyzing differential DRIP1 localization:

  • Consider cell-type specificity: Different cell types may exhibit distinct DRIP1 distribution patterns

  • Assess co-localization: Use markers for cellular compartments to precisely define localization

  • Evaluate activation status: DRIP1 localization may change with cellular activation or stress

  • Examine disease conditions: Compare localization between normal and pathological states

  • Verify with fractionation: Complement imaging with biochemical fractionation experiments

  • Investigate post-translational modifications: These may influence subcellular targeting

  • Confirm with super-resolution microscopy: Higher resolution can reveal more precise localization patterns

Present localization data with quantitative metrics such as Pearson's correlation coefficient for co-localization analyses.

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