ESC8 Antibody

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Description

Definition and Target

ESC8 antibody (Catalog: CBMOAB-00025CR) is a mouse-derived monoclonal antibody designed to recognize the yeast protein ESC8 (YOL017W). This protein is implicated in establishing silent chromatin regions, a critical process for transcriptional regulation and epigenetic stability .

Antibody Characteristics

Key properties of ESC8 antibody are summarized below:

ParameterDetails
Host SpeciesMouse
Target ProteinProtein ESC8 (Establishes Silent Chromatin Protein 8)
Species ReactivityYeast (Saccharomyces cerevisiae)
ApplicationsWestern Blot (WB), Enzyme-Linked Immunosorbent Assay (ELISA)
ImmunogenRecombinant or synthetic peptide derived from yeast ESC8 protein
Gene IDYOL017W
Alternative NamesEstablishes silent chromatin protein 8

Source:

Antibody Structure

ESC8 antibody follows the typical immunoglobulin architecture :

  • Fab Region: Binds specifically to the ESC8 antigen via variable domains (VH and VL).

  • Fc Region: Mediates immune interactions (e.g., binding to Fc receptors).

  • Hinge Region: Provides flexibility for antigen recognition .

Target Function

ESC8 protein is involved in:

  • Chromatin Silencing: Facilitates the formation of transcriptionally inactive heterochromatin .

  • Epigenetic Regulation: Maintains genomic stability by suppressing recombination at repetitive loci .

Research Applications

ESC8 antibody has been utilized in:

  1. Western Blot: Detects ESC8 protein expression in yeast lysates .

  2. ELISA: Quantifies ESC8 levels in experimental samples .

Technical Considerations

  • Cross-Reactivity: No cross-reactivity with human or mammalian proteins reported .

  • Storage: Stable at -20°C; avoid freeze-thaw cycles .

Limitations and Future Directions

  • Current Gaps: Limited peer-reviewed studies directly using ESC8 antibody; most data are manufacturer-provided .

  • Potential Uses: Expand into chromatin immunoprecipitation (ChIP) or fluorescence microscopy to map ESC8’s genomic localization.

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
ESC8 antibody; YOL017W antibody; Protein ESC8 antibody; Establishes silent chromatin protein 8 antibody
Target Names
ESC8
Uniprot No.

Target Background

Function
ESC8 plays a crucial role in histone modification and telomere silencing. It achieves this by facilitating the recruitment or stabilization of the SIR (silent information regulators) complex, which is essential for regulating gene expression and maintaining genomic integrity.
Gene References Into Functions
  1. A study revealed that Esc8, a protein that interacts with Sir2, is indispensable for the proper cohesion of silent chromatin. Prior research indicated that Esc8 associates with Isw1, the catalytic core of ISW1 chromatin remodelers, forming a unique variant of the ISW1a chromatin remodeling complex. PMID: 27185881
Database Links

KEGG: sce:YOL017W

STRING: 4932.YOL017W

Subcellular Location
Cytoplasm. Nucleus.

Q&A

What is ESC8 and what is its molecular structure?

ESC8 is a cationic lipid-conjugated estrogenic derivative synthesized by inserting an eight-carbon (C8), twin-chain, cationic lipid at the 17β position of estradiol (ES). It represents a novel class of estrogen structure-based molecules that demonstrates anticancer effects against breast cancer cells regardless of their estrogen receptor (ER) expression status. The synthesis involves lipid-based substitution at the cyclopentyl-ring (ring d), particularly at the 17β-position, which largely retains selective targeting abilities while enhancing cellular uptake through the cationic lipid moiety's natural affinity for negatively-charged cellular membranes .

How does ESC8 differ from other estrogenic compounds used in breast cancer research?

ESC8 demonstrates several unique characteristics compared to other estrogenic compounds. Unlike traditional estrogen-based therapies, ESC8 exhibits potent anticancer activity against both ER-positive and ER-negative breast cancer cell lines, making it potentially valuable for treating multi-staged breast cancer. In comparative studies, ESC8 showed greater efficacy than 2-methoxyestradiol (2OMe-ES), 4-hydroxytamoxifen (4OH-Tam), tamoxifen (Tam), and epirubicin (Epi) with lower IC50 values for both MCF-7 (3.0 μM) and MDA-MB-231 (3.2 μM) cells. Most significantly, ESC8 demonstrated selective toxicity toward cancer cells while showing negligible toxicity to normal cells, including normal breast epithelial cells, which is a critical advantage over many current therapies .

What are the primary mechanisms of action of ESC8 in breast cancer cells?

ESC8 operates through dual cell death mechanisms in breast cancer cells. It induces apoptosis through the intrinsic pathway in ER-negative MDA-MB-231 cells, as evidenced by activation of caspase pathways. Simultaneously, ESC8 treatment induces autophagy by interfering with mTOR activity. This dual induction of both apoptosis and autophagy represents a unique mechanism among estrogen-based molecules. The compound's anticancer effects appear to be independent of estrogen receptor status in ER-negative cells, as demonstrated by the inability of the ER-antagonist ICI182780 to abrogate ESC8's effects in MDA-MB-231 cells, while it did prevent effects in ER-positive MCF-7 cells .

How can researchers effectively measure ESC8-induced autophagy in experimental systems?

To measure ESC8-induced autophagy, researchers should employ multiple complementary approaches. Western blotting for autophagy markers such as LC-3B, Beclin-1, Atg5, and Atg12 is essential, as these proteins show characteristic changes during autophagy induction. Monitoring mTOR pathway components, particularly phosphorylated mTOR (p-mTOR) and p-p70S6K levels, provides insight into autophagy induction mechanisms, as ESC8 inhibits this pathway. Researchers should consider using antibodies against these targets with validated reactivity in the cell line of interest. For western blotting applications, antibody dilutions between 1:200-1:1000 are typically appropriate, though this should be optimized for each experimental system .

What antibodies and dilutions are recommended for studying ESC8's effects on cellular signaling pathways?

Based on published research on ESC8, the following antibodies and recommended dilutions are appropriate for studying its effects on cellular signaling:

PathwayAntibody TargetRecommended DilutionApplication
ApoptosisCaspase-3, Caspase-8, Caspase-91:200-1:1000Western Blot
ApoptosisBcl-2, BAX, Bid, Cytochrome c1:200-1:1000Western Blot
AutophagyLC-3B, Beclin-1, Atg5, Atg121:200-1:1000Western Blot
mTOR Pathwayp-mTOR, mTOR, p-p70S6K1:200-1:1000Western Blot
Akt Pathwayp-Akt-1/2/3, Akt-11:200-1:1000Western Blot

These recommendations are based on successful protocols used in ESC8 research. It is advisable to optimize these dilutions for specific experimental conditions .

What are the critical controls needed when studying ESC8 using antibody-based detection methods?

When studying ESC8 using antibody-based detection methods, several critical controls should be implemented. First, include both positive and negative cell line controls—ESC8 has demonstrated effects in MCF-7 (ER+) and MDA-MB-231 (ER-) cells, making them suitable positive controls. For mechanistic studies, include treatment groups with specific pathway inhibitors to confirm the involvement of proposed mechanisms. When evaluating ER-dependency, parallel experiments with the ER-antagonist ICI182780 should be performed in both ER-positive and ER-negative cell lines. For antibody validation, include loading controls (β-Actin), validation of antibody specificity, and concentration-response relationships. Time-course experiments are essential to distinguish between early and late cellular responses to ESC8 treatment .

How can researchers distinguish between ESC8-induced apoptosis and autophagy in experimental systems?

Distinguishing between ESC8-induced apoptosis and autophagy requires a multi-method approach. For apoptosis detection, researchers should employ flow cytometry with Annexin V/PI staining, TUNEL assay for DNA fragmentation, and western blotting for cleaved caspases (particularly caspase-3, -8, and -9) and cytochrome c release. For autophagy detection, fluorescence microscopy with LC3-GFP to visualize autophagosome formation, transmission electron microscopy to observe autophagosomal structures, and western blotting for LC3-I to LC3-II conversion, Beclin-1, Atg5, and Atg12 expression are recommended. To definitively distinguish these processes, researchers should conduct genetic knockdown experiments targeting key proteins in each pathway (e.g., Beclin-1 for autophagy, caspase-3 for apoptosis) and assess the impact on ESC8-induced cell death .

What methodological approaches are recommended for studying ESC8's effects in vivo?

For in vivo studies of ESC8, researchers should consider several methodological approaches. First, establish appropriate tumor xenograft models using cell lines shown to respond to ESC8 in vitro (e.g., MCF-7, MDA-MB-231). Dosing regimens should be carefully determined based on pharmacokinetic studies, with attention to the compound's stability and bioavailability. Tumor progression should be monitored using multiple parameters, including tumor volume, weight, and histopathological analysis. Immunohistochemistry (IHC) of tumor sections can provide valuable insights into the mechanism of action in vivo, using antibodies against markers of apoptosis, autophagy, and proliferation. For IHC applications, antibody dilutions of 1:50-1:500 are typically appropriate, with antigen retrieval using TE buffer pH 9.0 or citrate buffer pH 6.0, though these parameters should be optimized for each antibody .

What are common technical challenges when using antibodies to detect ESC8-induced signaling changes?

Researchers frequently encounter several technical challenges when using antibodies to detect ESC8-induced signaling changes. First, timing is critical as signaling events may be transient; therefore, conducting careful time-course experiments is essential. Second, the overlapping nature of apoptotic and autophagic pathways can complicate interpretation, making it necessary to use multiple markers for each pathway. Third, antibody specificity issues may arise, particularly when detecting phosphorylated proteins in the mTOR pathway, requiring proper validation with positive and negative controls. Fourth, detection sensitivity can be problematic for low-abundance targets, potentially requiring more sensitive detection methods or signal amplification. Finally, variations in cell type responses to ESC8 necessitate careful selection of appropriate cellular models and controls .

How can researchers optimize western blotting protocols for detecting ESC8's effects on protein expression?

To optimize western blotting protocols for detecting ESC8's effects, researchers should consider several key parameters. First, protein extraction should be performed with buffers containing appropriate protease and phosphatase inhibitors to preserve labile phosphorylation signals, particularly for p-mTOR and p-p70S6K. Sample preparation should include stringent quality control measures, ensuring equal loading with reliable housekeeping controls like β-Actin. For primary antibody incubation, dilutions between 1:200-1:1000 are typically appropriate, but should be optimized for each antibody. Extended incubation at 4°C overnight often improves signal-to-noise ratio for challenging targets. For detecting autophagy markers, particularly LC3-I to LC3-II conversion, gradient gels (4-20%) can provide better resolution of these closely migrating bands. When studying ESC8's dual effects on apoptosis and autophagy, multiplexed detection methods using differently labeled secondary antibodies can allow simultaneous detection of markers from both pathways on the same membrane .

What are promising research directions for developing antibody-based therapeutic approaches related to ESC8's targets?

Given ESC8's unique ability to induce both apoptosis and autophagy in breast cancer cells, several antibody-based therapeutic approaches hold promise. First, developing antibodies targeting the same signaling nodes affected by ESC8 (particularly in the mTOR pathway) could provide more specific therapeutic options. Second, combination therapies pairing ESC8 with targeted antibodies against breast cancer surface markers might enhance tumor-specific delivery while minimizing effects on normal cells. Third, developing antibody-drug conjugates (ADCs) that incorporate ESC8 or similar compounds as the payload could leverage the targeting specificity of antibodies with ESC8's dual cell death-inducing capabilities. Fourth, bispecific antibodies targeting both ER and molecules in the autophagy pathway could potentially mimic ESC8's dual-action mechanism. Finally, monitoring changes in immune checkpoint molecules following ESC8 treatment could reveal opportunities for combination with immune checkpoint inhibitor antibodies .

How can high-throughput epitope binning techniques advance research on ESC8 and related compounds?

High-throughput epitope binning techniques can significantly advance ESC8 research in several ways. First, these techniques can help develop antibodies that specifically recognize ESC8 or its protein targets in complex biological samples, facilitating more accurate detection in research and potentially clinical applications. Second, epitope binning can identify antibodies that recognize distinct conformational states of proteins modulated by ESC8 treatment, providing valuable tools for studying the compound's mechanism of action. Third, for proteins that interact with ESC8 (such as components of the mTOR pathway), epitope binning can identify antibodies that do not compete with ESC8 binding, allowing simultaneous binding of both the antibody and compound for detection or therapeutic purposes. Fourth, these techniques can rapidly evaluate panel diversity when developing antibodies against new targets discovered in ESC8 research. Finally, epitope binning can identify antibodies that recognize conserved epitopes across species, facilitating translational research from cell cultures to animal models and eventually clinical studies .

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