EXT2 Antibody

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Description

Introduction to EXT2 Antibody

The EXT2 antibody targets the EXT2 protein, encoded by the EXT2 gene located on chromosome 11p . This gene is part of the EXT family (EXT1, EXT2, EXTL1-3), which synthesizes heparan sulfate (HS), a glycosaminoglycan essential for cell signaling, tissue repair, and embryonic development . Mutations in EXT2 cause Hereditary Multiple Exostoses (HME), an autosomal dominant disorder characterized by benign bone tumors . EXT2 antibodies are widely used to investigate HS biosynthesis, HME pathogenesis, and EXT2-associated autoimmune conditions like membranous nephropathy (MN) .

Research Applications of EXT2 Antibodies

EXT2 antibodies are utilized across diverse methodologies:

ApplicationDetails
Western Blot (WB)Detects EXT2 (~82 kDa) in cell lysates (e.g., T47D cells) .
Immunohistochemistry (IHC)Identifies EXT2 in formalin-fixed tissues, showing granular glomerular basement membrane (GBM) staining in MN .
Flow CytometryQuantifies EXT2 expression in live cells (e.g., HeLa cells) .
Immunofluorescence (IF)Localizes EXT2 to Golgi/ER compartments .

Key findings using these antibodies include:

  • EXT1/EXT2 complex detection in 11.6% of PLA2R-negative MN cases, often linked to autoimmune markers like lupus .

  • Co-localization studies confirming EXT1/EXT2 interaction in the Golgi, critical for HS chain elongation .

Hereditary Multiple Exostoses (HME)

EXT2 mutations account for ~35% of HME cases. Antibodies help identify pathogenic variants and study HS dysregulation in chondrocyte differentiation .

EXT1/EXT2-Associated Membranous Nephropathy (MN)

EXT2 antibodies have identified a novel MN subtype characterized by:

  • Autoimmune associations: 80.7% of EXT1/EXT2-MN patients show autoimmune markers (e.g., antinuclear antibodies) .

  • Demographics: Female predominance (4:1 ratio) and younger onset (mean age: 35.7 years) .

ParameterEXT1/EXT2-Positive MN (n=26)EXT1/EXT2-Negative MN (n=198)
Autoimmune Markers80.7%29.2%
Lupus Diagnosis34.6%6.1%
GBM Staining (IgG)100% (2–3+/3)100% (1–3+/3)

Data adapted from Ravindran et al. (2021) .

Future Directions

EXT2 antibodies are advancing research in:

  • Cancer metastasis: HS regulates angiogenesis and tumor cell migration .

  • Therapeutic targeting: Blocking HS biosynthesis in autoimmune MN .

  • Gene therapy: Correcting EXT2 mutations in HME .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Composition: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
EXT2 antibody; HRGP1 antibody; At3g54590 antibody; T14E10.160Extensin-2 antibody; AtExt2 antibody; Cell wall hydroxyproline-rich glycoprotein 1 antibody; HRGP1 antibody
Target Names
EXT2
Uniprot No.

Target Background

Function
EXT2 Antibody is a structural component that strengthens the primary cell wall.
Database Links

KEGG: ath:AT3G54590

STRING: 3702.AT3G54590.1

UniGene: At.35094

Protein Families
Extensin family
Subcellular Location
Secreted, primary cell wall.
Tissue Specificity
Predominantly expressed in the roots.

Q&A

Here’s a structured collection of FAQs for researchers working with EXT2 antibodies, synthesized from peer-reviewed studies and technical guidelines:

How to resolve contradictions in EXT2 localization data across studies?

Advanced Analysis:

  • Context-dependent localization: EXT2 primarily localizes to ER when expressed alone but shifts to Golgi when co-expressed with EXT1 . Ensure co-expression status is documented.

  • Fixation artifacts: Compare methanol/acetone vs. paraformaldehyde fixation, as HS-protein complexes are sensitive to permeabilization .

  • Cell-type variability: Test multiple models (e.g., HEK293 vs. sog9 cells) to assess tissue-specific trafficking .

What controls are critical for EXT2 antibody-based assays?

Experimental Design Framework:

  • Negative controls:

    • Isotype-matched IgG + secondary antibody

    • EXT2-knockout cells

  • Positive controls:

    • Cells overexpressing GFP-tagged EXT2

    • Co-staining with HS biosynthesis markers (e.g., NDST1)

How to optimize EXT2 detection in heparan sulfate (HS) biosynthesis studies?

Technical Guidelines:

  • Sample preparation: Use 0.1% saponin for permeabilization to preserve Golgi integrity .

  • Antibody dilution: Start with 1:200–1:500 (empirically determine using titration series).

  • Cross-validation: Pair IF with HS disaccharide analysis via LC-MS to correlate EXT2 levels with HS sulfation patterns .

What advanced techniques leverage EXT2 antibodies in mechanistic studies?

Research Applications:

  • Dynamic complex analysis:

    • Perform Förster resonance energy transfer (FRET) between EXT2 and EXT1 antibodies

    • Use proximity ligation assays (PLA) to quantify EXT2-NDST1 interactions

  • Functional assays:

    • Couple siRNA-mediated EXT2 knockdown with HS chain elongation assays

How to interpret conflicting EXT2 expression data in cancer models?

Data Contradiction Resolution:

  • Tumor heterogeneity: Distinguish between stem cells (low HS) vs. differentiated cells (high HS) using CD44/CD24 co-staining .

  • Post-translational regulation: Assess EXT2 degradation via cycloheximide chase assays if mRNA/protein levels disagree .

Table 2: Troubleshooting EXT2 Data Discrepancies

IssuePotential CauseSolution
Weak IF signalOverfixationTest shorter fixation times
Non-specific bandsProteolytic cleavageAdd fresh protease inhibitors
Inconsistent Co-IPTransient interactionsUse crosslinkers like DSP before lysis

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