FAMT Antibody

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Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M Phosphate Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
FAMT antibody; At3g44860 antibody; F28D10.50 antibody; Farnesoic acid carboxyl-O-methyltransferase antibody; EC 2.1.1.325 antibody; SABATH methyltransferase FAMT antibody
Target Names
FAMT
Uniprot No.

Target Background

Function
This antibody may catalyze the production of the insect juvenile hormone methyl farnesoate (MeFA), thereby triggering a defense mechanism against insect herbivory.
Database Links

KEGG: ath:AT3G44860

STRING: 3702.AT3G44860.1

UniGene: At.10101

Protein Families
Methyltransferase superfamily, SABATH family
Tissue Specificity
Mostly expressed in leaves and, at very low levels, in roots, stems, flowers and siliques.

Q&A

What is FAMT and how is it used in cancer detection?

FAMT (3-[18F]Fluoro-α-methyl-L-tyrosine) is an amino acid positron emission tomography (PET) tracer specifically designed for cancer detection through assessment of tumor amino acid metabolism. Unlike more general tracers, FAMT demonstrates high specificity to neoplastic tissues and correlates with the grade of malignancy. The tracer functions by targeting L-type amino acid transporter 1 (LAT-1), which is highly expressed in various malignant tumors .

To implement FAMT PET in research protocols, patients typically undergo both FAMT and conventional 2-deoxy-2-[18F]fluoro-D-glucose (FDG) PET scans within a week's interval. Visualization and quantification are performed using standardized uptake value (SUV) measurements, which allow for semiquantitative analysis of tracer accumulation in tumor tissues .

How does FAMT compare with FDG in cancer imaging studies?

FAMT demonstrates several distinct advantages over FDG in cancer imaging research:

ParameterFAMTFDG
Specificity for malignancyHigher (significantly higher uptake in malignant tumors)Lower (uptake in both malignant and benign tumors)
Background uptakeMinimal in normal tissuesConsiderable in normal tissues
Inflammatory tissue uptakeLowHigh
Tumor margin visualizationClearer identification of viable tumorsLess precise tumor delineation
Correlation with malignancy markersStrong correlation with LAT-1 and Ki-67 expressionLess specific correlation

In maxillofacial tumor studies, FAMT showed significantly higher uptake in malignant tumors compared to benign lesions, while FDG uptake was noted in both malignant and benign tumors without statistically significant difference in SUVs. Additionally, FAMT allows for clearer identification of viable tumor tissues compared to FDG .

What molecular mechanisms explain FAMT accumulation in cancer cells?

FAMT accumulation in cancer cells is primarily mediated through the L-type amino acid transporter 1 (LAT-1). Research has demonstrated that the expression of LAT-1 is significantly correlated with FAMT uptake in tumors. Immunohistochemical analysis reveals that LAT-1 expression is positive in malignant tumors but negative in benign tissue specimens .

This transport mechanism explains why FAMT demonstrates greater specificity for malignant tissues compared to FDG, which accumulates based on increased glucose metabolism that can occur in both malignant and inflammatory processes. The amino acid transport system targeted by FAMT appears to be more uniquely upregulated in cancer progression.

How does FAMT uptake correlate with PD-L1 expression in non-small cell lung cancer?

Studies have demonstrated a significant correlation between FAMT uptake and programmed death ligand-1 (PD-L1) expression in non-small cell lung cancer (NSCLC). Specifically, high uptake of FAMT was significantly associated with PD-L1 expression as assessed by immunohistochemistry using antibody clones E1L3N and 28-8 .

The maximum standardized uptake value (SUVmax) for FAMT showed particularly strong correlation with PD-L1 expression in adenocarcinoma (AC) subtypes and in advanced disease stages. This relationship was validated using multiple PD-L1 antibody clones, where a statistically significant correlation was observed between:

  • SUVmax for FAMT and PD-L1 (28-8) expression

  • PD-L1 (E1L3N) and PD-L1 (28-8) expression

This correlation suggests potential applications for FAMT PET in predicting responsiveness to immunotherapy targeting the PD-1/PD-L1 pathway.

What methodological considerations are important when studying correlations between FAMT uptake and tumor immune markers?

When investigating correlations between FAMT uptake and tumor immune markers, researchers should consider the following methodological approaches:

How can FAMT PET imaging be combined with antibody markers for enhanced cancer diagnostics?

Integration of FAMT PET imaging with antibody-based markers offers a promising approach for comprehensive cancer diagnostics. A multi-modal strategy can be implemented as follows:

  • Sequential diagnostic workflow:

    • Initial FAMT PET imaging to identify and localize metabolically active tumors

    • Biopsy of PET-positive lesions for immunohistochemical analysis

    • Correlation of imaging features with antibody expression profiles

  • Combined biomarker panels: Similar to the approach used for hepatocellular carcinoma (HCC) where autoantibodies to tumor-associated antigens (TAAs) were combined with alpha-fetoprotein (AFP), FAMT uptake metrics could be integrated with antibody detection in statistical models to improve diagnostic accuracy .

  • Risk stratification algorithms: Developing scoring systems that incorporate:

    • FAMT SUVmax values

    • PD-L1 expression levels

    • Other antibody-based biomarkers

    • Clinicopathological features

In HCC studies, combining antibody detection with traditional markers increased diagnostic sensitivity from 66.2% to 88.7% . A similar approach could be applied to FAMT imaging metrics, potentially improving both sensitivity and specificity of cancer detection and characterization.

What challenges exist in correlating FAMT uptake with antibody expression in heterogeneous tumors?

Several methodological challenges must be addressed when correlating FAMT uptake with antibody expression in heterogeneous tumors:

  • Spatial heterogeneity: Tumors often exhibit heterogeneous expression of transporters and immune markers. Researchers must ensure that biopsied regions correspond precisely to areas of interest on PET imaging, potentially using image-guided biopsies.

  • Temporal variability: Expression of transporters and immune markers may change over time and in response to treatments. Timing of imaging and biopsy procedures should be carefully considered and standardized.

  • Quantification limitations: PET imaging has resolution limitations that may obscure small regions of differential uptake, while immunohistochemistry provides highly localized information that may not represent the entire tumor.

  • Antibody selection challenges: As noted in the literature on secondary detection, selecting appropriate antibodies is crucial for reliable immunoassay data . When studying correlations with FAMT, researchers must carefully select antibodies with proven specificity and optimize protocols to avoid artifacts.

  • Endogenous interference: Endogenous immunoglobulins or enzymes may interfere with antibody detection. Specialized blocking protocols may be necessary, such as using unconjugated Fab fragment antibodies to block endogenous immunoglobulins prior to primary antibody application .

How might FAMT uptake patterns inform the development of antibody-based targeted therapies?

FAMT uptake patterns could guide antibody-based therapy development through several mechanisms:

  • Patient selection optimization: The correlation between FAMT uptake and immune markers like PD-L1 suggests that FAMT PET could help identify patients more likely to respond to immune checkpoint inhibitors or other antibody-based immunotherapies .

  • Target validation: FAMT uptake correlates with LAT-1 expression, which represents a potential therapeutic target itself. Antibodies targeting LAT-1 could be developed and their efficacy might be predicted by FAMT uptake patterns .

  • Resistance mechanism identification: Discordant patterns between FAMT uptake and therapeutic response could highlight resistance mechanisms, informing the development of next-generation antibody therapies or combination approaches.

  • Monitoring therapeutic response: Sequential FAMT PET imaging could provide early indications of response to antibody-based therapies before conventional size-based criteria show changes.

  • Antibody-drug conjugate (ADC) development: Understanding the relationship between FAMT uptake and target expression could inform the selection of appropriate targets for ADC development, particularly those internalized via amino acid transport systems.

What molecular mechanisms might explain the correlation between FAMT uptake and PD-L1 expression?

Several potential molecular mechanisms may explain the observed correlation between FAMT uptake and PD-L1 expression:

  • Shared regulatory pathways: Both LAT-1 (the transporter for FAMT) and PD-L1 expression may be regulated by common oncogenic pathways, such as hypoxia-inducible factor (HIF) signaling or inflammatory cytokine responses.

  • Metabolic reprogramming: Cancer cells undergoing metabolic reprogramming often upregulate both amino acid transporters and immune evasion mechanisms simultaneously. The increased amino acid uptake (reflected by FAMT) might support the increased protein synthesis needed for PD-L1 expression.

  • Tumor microenvironment interaction: Inflammation in the tumor microenvironment may induce both amino acid transporter expression (to support increased metabolic demands) and PD-L1 expression (as a response to inflammatory signals like interferon-gamma).

  • Cellular stress response: Both metabolic stress (leading to increased amino acid transport) and immune pressure (leading to PD-L1 upregulation) may be particularly pronounced in aggressive tumors, explaining their correlation.

Understanding these mechanisms could provide insights into combined targeting of metabolic and immune pathways in cancer treatment.

What antibody validation methods should be employed when studying FAMT-related biomarkers?

When studying FAMT-related biomarkers, comprehensive antibody validation is essential for reliable results:

  • Enhanced validation approach: As described in literature, antibodies should undergo rigorous validation in multiple applications including immunohistochemistry (IHC), immunofluorescence (ICC-IF), and Western blotting (WB) .

  • Target specificity confirmation: Validate antibody specificity using:

    • Positive and negative control tissues/cells

    • Knockout or knockdown models when available

    • Peptide competition assays

    • Comparison of results with multiple antibody clones targeting different epitopes of the same protein

  • Application-specific optimization: Optimize antibody concentration, incubation time, and detection systems specifically for each application (e.g., primary to secondary antibody ratios, detection system sensitivity) .

  • Cross-reactivity testing: Especially important when studying transporters like LAT-1, which may have structural similarity to other transport proteins.

  • Reproducibility assessment: Perform inter-laboratory validation when possible and test antibody performance across different lots to ensure consistent results.

How should researchers design experiments to accurately correlate FAMT PET imaging with antibody-based biomarkers?

A robust experimental design for correlating FAMT PET imaging with antibody-based biomarkers should include:

  • Prospective study design with:

    • Clear inclusion/exclusion criteria

    • Standardized imaging protocols (patient preparation, acquisition parameters, reconstruction methods)

    • Predefined quantification methods for both imaging and immunohistochemistry

    • Sample size calculation based on expected effect size

  • Spatial correlation methodology:

    • Image-guided biopsies to ensure sampling of regions with varying FAMT uptake

    • Multiple biopsies from different tumor regions to account for heterogeneity

    • 3D mapping of biopsy locations onto PET images

  • Multidisciplinary approach involving:

    • Nuclear medicine specialists for optimal PET acquisition and interpretation

    • Pathologists for tissue processing and antibody staining optimization

    • Molecular biologists for mechanistic studies

    • Biostatisticians for appropriate statistical analysis of correlations

  • Antibody panel selection:

    • Include antibodies targeting LAT-1 (primary FAMT transporter)

    • Include immune markers (PD-L1, TILs markers like CD3, CD4, CD8)

    • Include metabolic markers (Glut1, HIF-1α)

    • Include proliferation markers (Ki-67)

  • Standardized reporting following:

    • STARD guidelines for diagnostic accuracy studies

    • REMARK guidelines for tumor marker prognostic studies

    • Detailed documentation of all antibody characteristics and staining protocols

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