At5g44950 Antibody

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Description

Overview of At5g44950 Antibody

The At5g44950 antibody targets the protein product of the AT5G44950 gene, which corresponds to ARGONAUTE10 (AGO10) in Arabidopsis thaliana. AGO10 is a member of the AGO protein family involved in small RNA-guided gene silencing pathways, particularly in shoot apical meristem (SAM) maintenance and lateral organ development .

Key Features:

  • Host Species: Typically raised in rabbits or mice.

  • Applications: Western blot (WB), immunohistochemistry (IHC), and immunoprecipitation (IP) .

  • Specificity: Binds to epitopes within the AGO10 protein, validated via knockdown/knockout controls in plant models .

Biological Role of AT5G44950 (AGO10)

AGO10 regulates SAM development by modulating the expression of Class III HOMEODOMAIN-LEUCINE ZIPPER (HD-ZIP III) transcription factors, which maintain stem cell pluripotency . It also interacts with the bHLH transcription factor INDEHISCENT (IND) to regulate tissue symmetry and auxin transport .

Functional Insights:

  • SAM Development: AGO10 mutants (ago10zwl-3) fail to establish SAM and exhibit disrupted leaf polarity .

  • Gene Silencing: Competes with AGO1 to bind miR166/165, fine-tuning HD-ZIP III activity .

  • Replum Formation: Represses IND to ensure proper carpel margin development .

Experimental Use Cases

  • Western Blot: Detects AGO10 (~110 kDa) in Arabidopsis lysates .

  • Immunohistochemistry: Localizes AGO10 in SAM and vascular tissues .

Validation Data

ParameterDetails
ImmunogenRecombinant AGO10 (amino acids 99–193) .
Cross-ReactivityConfirmed in Arabidopsis, with potential reactivity in other plants.
Controlsago10 knockout lines show no signal .

Current Research Gaps

  • Structural Data: No published crystal structures or epitope mapping for the At5g44950 antibody.

  • Functional Studies: Limited in vivo data on antibody efficacy in non-Arabidopsis species.

  • Commercial Availability: Only one supplier (Cusabio) lists this antibody, with no peer-reviewed validation .

Future Directions

  • Mechanistic Studies: Clarify AGO10’s role in auxin/cytokinin crosstalk using antibody-based IP-MS.

  • Agricultural Relevance: Explore AGO10’s utility in crop yield optimization via meristem engineering.

Authoritative References

  1. Valluru, M. K. (2017). ARGONAUTE10 Inhibits INDEHISCENT to Regulate Shoot Apical Meristem Development .

  2. Cusabio. (2025). At5g44950 Antibody Product Specifications .

Product Specs

Buffer
Preservative: 0.03% ProClin 300; Constituents: 50% Glycerol, 0.01M Phosphate Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
14-16 week lead time (made-to-order)
Synonyms
At5g44950 antibody; K21C13.14Putative F-box/FBD/LRR-repeat protein At5g44950 antibody
Target Names
At5g44950
Uniprot No.

Q&A

Given the specific nature of the query regarding "At5g44950 Antibody," which does not appear in the provided search results, I will create a general FAQ collection for researchers focusing on antibody-related research scenarios. This will cover aspects relevant to experimental design, data analysis, and methodological considerations in academic research.

A:

To validate the specificity of an antibody, you should:

  • Use Positive and Negative Controls: Include samples known to express the target protein and those that do not.

  • Perform Western Blotting: This helps confirm the molecular weight of the target protein.

  • Conduct Immunohistochemistry (IHC): To visualize the protein's localization in tissues.

  • Run Competition Assays: Use the antigen to compete with the antibody for binding sites to confirm specificity .

A:

  • Re-evaluate Experimental Conditions: Ensure consistency in buffer composition, temperature, and incubation times.

  • Check Antibody Lot Variability: Different lots may have varying levels of specificity or activity .

  • Use Multiple Detection Methods: Combine techniques like Western blotting and IHC to confirm findings .

A:

To determine the epitope specificity:

  • Use Epitope Mapping Techniques: Such as peptide arrays or mutagenesis studies to identify the exact binding site on the protein .

  • Conduct Competition Assays: With other antibodies known to bind to different epitopes on the same protein.

A:

  • Application-Specific Validation: Ensure the antibody performs well in the chosen assay (e.g., flow cytometry, IHC) .

  • Species and Isotype Compatibility: Choose antibodies that are compatible with your experimental system (e.g., mouse monoclonal for mouse tissues).

  • Literature Review: Check previous studies for reported performance and specificity issues .

A:

  • IgG1 and IgG4 Differences: IgG1 is more likely to induce effector functions like complement activation, whereas IgG4 is often associated with chronic exposure and may not activate complement .

  • Experimental Design: Consider the biological context and desired outcome when selecting an antibody subclass for your study.

A:

  • Use Specificity Controls: Include samples with proteins of similar molecular weights or structures to check for non-specific binding .

  • Optimize Assay Conditions: Adjust conditions like antibody concentration and incubation time to reduce non-specific interactions .

A:

  • Genetic Strategies: Techniques like RNA interference can help validate antibody specificity by knocking down the target protein .

  • Mass Spectrometry: Used to identify proteins bound by antibodies, ensuring specificity .

A:

  • Standardize Protocols: Use consistent protocols across experiments.

  • Include Replicates: Run multiple replicates to confirm findings.

  • Share Detailed Methods: Provide full experimental details in publications to facilitate replication by others .

A:

  • Immunogenicity Testing: Essential for detecting anti-drug antibodies (ADAs) that can affect therapeutic efficacy and safety .

  • Risk-Based Approach: FDA recommends a risk-based strategy for evaluating and managing immune responses to therapeutic proteins .

A:

  • Diversity in Antibody Repertoires: Human antibodies show great diversity, which can be leveraged for understanding disease mechanisms and developing treatments .

  • Implications for Autoimmune Diseases: Understanding antibody diversity can aid in diagnosing autoimmune diseases and designing targeted therapies .

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