GD3 is a glycosphingolipid overexpressed on melanoma cells and other neuroectodermal tumors. It has been a key target for passive immunotherapy due to its limited expression on normal tissues. Antibodies against GD3 employ mechanisms such as antibody-dependent cellular cytotoxicity (ADCC) and complement-dependent cytotoxicity (CDC) to eliminate tumor cells.
Murine IgG3 Antibodies
R24 (IgG3):
Binds GD3 with specificity, inducing ADCC and CDC.
Clinical trials (Phase I/II) demonstrated tumor regressions in melanoma patients, though side effects like inflammatory reactions were noted.
Mechanism: ADCC via human effector cells (e.g., lymphocytes) and CDC via complement activation.
KM641 (IgG3):
Used as a murine precursor for chimeric/humanized versions.
Limited clinical utility due to immunogenicity (human anti-mouse antibodies, HAMA).
Chimeric and Humanized Antibodies
KM871 (Chimeric IgG1):
Combines murine variable regions with human constant regions (κ and γ1).
Enhanced ADCC and CDC efficacy compared to KM641 when tested with human serum and PBMCs.
Preclinical Efficacy: Suppressed tumor growth in nude mice.
Antibody
Isotype
Target
Key Features
Efficacy
References
R24
IgG3
GD3
ADCC/CDC, clinical tumor regressions
Partial responses in melanoma
KM871
IgG1
GD3
Chimeric, reduced immunogenicity
Tumor suppression in nude mice
2B2
IgG3
GD3
ADCC with human/mouse effectors
Inhibited melanoma growth in vivo
Antigen Binding and Somatic Hypermutation (SHM)
CDR3 Regions: GD3-specific antibodies display distinct CDR-H3 and CDR-L3 lengths. For example, antigen-specific clones in bone marrow and spleen repertoires had longer CDR-H3 regions (mean 17.9 aa in bone marrow) compared to non-specific clones (mean 13.1 aa).
SHM Patterns: High-affinity clones exhibit higher SHM percentages in variable regions, correlating with improved binding kinetics.
Functional Comparisons
ADCC vs. CDC:
IgG3 isotypes (e.g., R24) are more effective in CDC but less so in ADCC compared to IgG1. Chimeric/humanized IgG1 variants (e.g., KM871) show enhanced ADCC with human effector cells.
Responses: Tumor biopsies showed lymphocyte infiltration and complement deposition. Major regressions observed in 3/12 patients.
Side Effects: Inflammatory reactions (urticaria, erythema) at higher doses.
Chimeric Antibodies in Preclinical Models
KM871:
Tumor Suppression: Marked reduction in melanoma growth in nude mice.
Immunogenicity: Reduced HAMA response compared to murine counterparts.
Humanization Strategies
Variable Region Grafting: Transfer of murine VH/VL regions to human constant domains (e.g., KM871).
Enhanced ADCC: IgG1 subclasses (e.g., ch3F8-IgG1) show superior ADCC potency (~300-fold higher EC₅₀ ratios vs. murine IgG3).
Sequence Databases and Repertoire Analysis
Observed Antibody Space (OAS): A public database containing 1.5 billion antibody sequences, including paired VH/VL data, enabling comparative analysis of GD3-targeting clones.
SHM and Clonal Expansion: GD3-specific lineages often use IGHV3-33, IGHV3-11, and IGKV1-9 genes, with clonal expansions observed in both bone marrow and spleen repertoires.
Future Directions
Bispecific Antibodies: Targeting GD3 alongside other tumor antigens (e.g., GD2) to enhance specificity and reduce off-target effects.
Combination Therapies: Pairing GD3 antibodies with checkpoint inhibitors (e.g., anti-PD-1) to bolster immune responses.
Precision Medicine: Leveraging repertoire sequencing to identify high-affinity clones with optimal CDR3 features.
GDU3 is likely a subunit of an amino acid transporter that plays a role in regulating amino acid metabolism. It stimulates the export of amino acids by activating non-selective amino acid facilitators. GDU3 acts upstream of genes involved in the salicylic acid (SA) pathway and in the geminivirus-host interaction.
Gene References Into Functions
Up-regulation of LSB1/GDU3 affects geminivirus infection by activating the salicylic acid pathway. [GDU3] PMID: 20042021