GDV1 Antibody, Biotin conjugated

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Description

Nomenclature Analysis

The term "GDV1" does not correspond to any characterized protein, gene symbol, or UniProt entry in standard biological databases. Potential explanations include:

  • Typographical error: Possible confusion with GDNF (glial cell-derived neurotrophic factor), GDF1 (growth differentiation factor 1), or GDNF family receptor alpha-1 (GFRA1).

  • Proprietary designation: Unpublished internal identifiers from specific laboratories or companies may use non-standard acronyms.

Biotin Conjugation Methodology

While GDV1-specific data is unavailable, general principles of biotinylated antibody development can be inferred from analogous systems in the search results:

Key Properties of Biotinylated Antibodies

ParameterTypical SpecificationExample from Search Results (Glucose Oxidase Antibody )
Host SpeciesRabbit, mouse, goatRabbit polyclonal
Conjugation MethodNHS-biotin or site-specific conjugationBiotin conjugated via lysine residues
ApplicationsELISA, Western blot, IHCELISA, WB (1:5,000–1:25,000 dilution)
StorageLyophilized or liquid with stabilizing agents0.02 M phosphate buffer, pH 7.2

Functional Validation Steps

Biotinylated antibodies require rigorous quality control, as demonstrated in studies of Fab fragment biotinylation :

Critical Validation Metrics

  1. Antigen Binding Affinity:

    • SPR analysis of biotinylated Fab fragments showed 66–72% retained affinity compared to native Fab .

    • KD,appK_{D,\text{app}} values ranged from 7.1 nM (native) to 10.5 nM (biotinylated) .

  2. Streptavidin Reactivity:

    • Western blot confirmation using Cy3-streptavidin ensures proper biotinylation .

  3. Aggregation Monitoring:

    • SDS-PAGE under non-reducing conditions detects aberrant multimers .

Research Gaps and Recommendations

  1. Verify the exact nomenclature of "GDV1" through databases like NCBI Gene, UniProt, or IUPHAR.

  2. Explore orthogonal conjugation strategies (e.g., cysteine-selective dibromopyridazinediones ) to improve batch-to-batch consistency.

  3. Conduct epitope mapping to ensure biotinylation does not sterically hinder antigen binding, as observed in Fab fragment studies .

Product Specs

Buffer
**Preservative:** 0.03% Proclin 300
**Constituents:** 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
We typically dispatch orders for GDV1 Antibody, Biotin conjugated within 1-3 business days of receipt. Delivery times may vary depending on the purchasing method and location. For specific delivery times, please consult your local distributor.
Target Names
GDV1
Uniprot No.

Q&A

What is GDV1 and why is it significant in Plasmodium research?

GDV1 (Gametocyte Development 1) is a nuclear protein implicated in sexual commitment and early gametocytogenesis in Plasmodium falciparum, the parasite responsible for the most severe form of malaria. Research has shown that GDV1 functions as an effector protein that induces sexual differentiation by antagonizing Heterochromatin Protein 1 (HP1)-dependent gene silencing . GDV1 plays a critical role in regulating the parasite's ability to produce gametocytes, which are essential for malaria transmission from humans to mosquitoes. Understanding GDV1 function is crucial for developing transmission-blocking strategies for malaria control .

What is the structural and functional significance of biotin conjugation in antibodies?

Biotin conjugation provides antibodies with exceptional detection capabilities due to the extraordinarily strong interaction between biotin and avidin/streptavidin. This non-covalent interaction has equilibrium dissociation constants of approximately 1 × 10^-15 M for avidin and 4 × 10^-14 M for streptavidin, making it one of the most robust non-covalent interactions found in nature . This property enables sensitive detection systems in various applications including ELISA, immunohistochemistry, and immunofluorescence. The conjugation process maintains antibody function while adding the versatility of biotin-streptavidin detection systems, allowing for amplification of signals and flexibility in experimental design .

What are the optimal protocols for using GDV1 Antibody, Biotin conjugated in immunoassays?

For optimal results in immunoassays using GDV1 Antibody, Biotin conjugated, the following protocol recommendations should be considered:

Western Blotting:

  • Recommended dilution: 1:1000-1:5000

  • Buffer composition: Typically in TBS-T with 1-5% non-fat milk or BSA

  • Incubation time: 1-2 hours at room temperature or overnight at 4°C

  • Detection: Use streptavidin-conjugated HRP or other reporter molecules

ELISA:

  • Optimal working dilution should be determined experimentally, starting at 1:1000

  • Blocking solution: 1-5% BSA in PBS or TBS to minimize background

  • Streptavidin-enzyme conjugate dilution: Typically 1:2000-1:10000

  • Substrate development time: 15-30 minutes depending on signal strength

How can I verify the specificity and validate the performance of GDV1 Antibody, Biotin conjugated?

Validation of GDV1 Antibody, Biotin conjugated should include multiple approaches:

  • Positive and Negative Controls:

    • Positive control: Plasmodium falciparum samples known to express GDV1

    • Negative control: Parasite lines with GDV1 knockout or non-Plasmodium samples

  • Cross-Reactivity Testing:

    • Test against closely related Plasmodium species

    • Evaluate using various parasite life stages (as GDV1 expression varies across stages)

  • Functional Validation:

    • Compare antibody binding patterns with published GDV1 localization data

    • Confirm nuclear localization with co-staining using nuclear markers

  • Biotin Functionality Assessment:

    • Test binding to streptavidin-conjugated beads or plates

    • Evaluate signal-to-noise ratio in detection assays

What factors affect the stability and storage of GDV1 Antibody, Biotin conjugated?

Several factors influence the stability of biotinylated antibodies:

FactorRecommendationRationale
TemperatureStore at -20°C for long-term; 4°C for working aliquotsPrevents degradation and maintains biotin conjugation
Buffer compositionStore in buffer containing 20% glycerol, phosphate buffer, pH 7.4Stabilizes protein structure and prevents freeze-thaw damage
Freeze-thaw cyclesMinimize; prepare small working aliquotsRepeated freezing and thawing can reduce antibody activity
Light exposureProtect from lightSome fluorophores in detection systems are light-sensitive
ContaminationUse sterile techniquesPrevents microbial growth and degradation

How does the C-terminal truncation of GDV1 affect its function in Plasmodium sexual development?

Research has demonstrated that a 39-amino-acid C-terminal truncation of GDV1 (GDV1Δ39) critically disrupts sexual development in Plasmodium falciparum. This truncation represents a significant functional alteration while maintaining certain structural properties:

  • Nuclear Localization: GDV1Δ39 retains the ability to be imported into the nucleus, despite the C-terminal region containing a predicted nuclear bipartite localization sequence .

  • HP1 Interaction: In vitro experiments show that GDV1Δ39 can still physically interact with HP1 when expressed in E. coli systems. This was demonstrated through affinity purification where His-tagged GDV1Δ39 successfully pulled down Strep-tagged HP1 .

  • Functional Impairment: Despite maintaining HP1 interaction in vitro, parasites expressing GDV1Δ39 lose the ability to form gametocytes. This indicates that while the truncated protein may interact with HP1, this interaction is insufficient to trigger the downstream events necessary for gametocytogenesis .

  • Expression System Comparison: When researchers introduced an ectopic gdv1Δ39-gfp fusion gene under the control of a calmodulin promoter, they found that unlike the full-length GDV1-GFP, GDV1Δ39-GFP overexpression failed to induce gametocyte conversion .

These findings suggest that the C-terminal 39 amino acids of GDV1 are essential for its function in triggering sexual commitment, despite not being required for HP1 interaction or nuclear localization.

How can GDV1 Antibody, Biotin conjugated be used to investigate GDV1-HP1 interactions?

GDV1 Antibody, Biotin conjugated provides valuable tools for investigating the critical interaction between GDV1 and HP1:

  • Co-Immunoprecipitation Studies:

    • The biotinylated antibody can be used with streptavidin-conjugated beads to efficiently pull down GDV1 complexes

    • Western blot analysis of precipitated material can reveal HP1 and other interaction partners

    • Comparative analysis between wild-type GDV1 and mutant versions (like GDV1Δ39) can reveal structural requirements for interaction

  • Chromatin Immunoprecipitation (ChIP):

    • ChIP-seq experiments using GDV1 Antibody, Biotin conjugated can map GDV1 occupancy on chromatin

    • This has revealed that GDV1 associates specifically with heterochromatin throughout the genome and its occupancy is highly correlated with that of HP1

    • Time-course experiments have shown that GDV1 occupancy peaks approximately six hours post-induction and decreases substantially thereafter

  • Proximity Ligation Assays:

    • In situ visualization of GDV1-HP1 interactions using biotinylated GDV1 antibody paired with a different HP1 antibody

    • This technique provides spatial resolution of interactions within the nucleus

What are common issues when using biotinylated antibodies and their solutions?

IssuePossible CausesSolutions
High backgroundEndogenous biotin in samplesPre-block with avidin/streptavidin before adding biotinylated antibody
Non-specific bindingIncrease blocking concentration; use different blocking agent (BSA, casein, normal serum)
Excessive antibody concentrationTitrate antibody to determine optimal concentration
Weak signalInsufficient biotinylationVerify biotinylation efficiency (≥90% is typically optimal)
Suboptimal incubation conditionsIncrease incubation time or adjust temperature
Protein degradationCheck antibody integrity; use fresh reagents
Cross-reactivityAntibody specificity issuesPerform comprehensive validation with controls
Secondary structure interferenceModify sample preparation (different fixation/permeabilization)
Inconsistent resultsVariable biotin conjugation levelsUse antibodies with verified and consistent conjugation ratio
Buffer incompatibilityEnsure buffer composition is compatible with assay

How can I optimize the detection of GDV1 in different Plasmodium life stages?

GDV1 detection across Plasmodium life stages requires stage-specific optimization:

  • Asexual Blood Stages:

    • GDV1 expression is generally low but detectable in a subset of parasites committed to gametocytogenesis

    • Co-staining with nuclear markers like MCM2 can help identify nuclear localization

    • Fixation method is critical: Use 4% paraformaldehyde with careful permeabilization to preserve nuclear structure

  • Early Gametocytes:

    • GDV1 expression is higher and co-localizes with early gametocytogenesis markers like Pfs16 and PfGE3

    • Optimize antibody concentration for this stage (typically 1:500 dilution)

    • Allow longer incubation time (overnight at 4°C) for better penetration

  • Late Gametocytes:

    • GDV1 expression may decrease

    • Signal amplification using tyramide signal amplification may be necessary

    • Counter-staining with stage-specific markers helps identify parasite developmental stage

  • Quantification Methods:

    • For population analysis, flow cytometry using GDV1 Antibody, Biotin conjugated with streptavidin-fluorophore can quantify GDV1-positive parasites

    • For single-cell analysis, confocal microscopy with z-stacking provides detailed localization information

How does GDV1 antibody detection compare between wild-type and genetically modified Plasmodium strains?

When comparing GDV1 detection between wild-type and modified parasites:

  • Expression Level Differences:

    • In conditional overexpression systems (like NF54/GDV1:GFP_cOE), GDV1 signal is substantially higher than in wild-type parasites

    • Transcript levels of gdv1Δ39:gfp can be approximately 2-fold higher upon induction compared to baseline levels

  • Localization Pattern Variations:

    • Wild-type GDV1 shows distinct punctate nuclear localization pattern

    • GDV1Δ39:GFP demonstrates nuclear localization but may have altered distribution patterns within the nucleus

  • Functional Correlation:

    • In wild-type parasites, GDV1 detection correlates with gametocyte formation

    • In parasites expressing GDV1Δ39, antibody detection does not correlate with gametocyte formation despite protein detection

  • Technical Considerations:

    • When comparing strains, maintain identical staining conditions, image acquisition parameters, and analysis methods

    • Always include wild-type controls in the same experiment

    • Quantify relative fluorescence intensity using appropriate image analysis software

What are emerging applications of biotinylated antibodies in Plasmodium research?

Recent advances in biotinylated antibody applications for Plasmodium research include:

  • Single-Cell Transcriptomics:

    • Biotinylated antibodies enable cell sorting based on GDV1 expression for subsequent single-cell RNA sequencing

    • This approach has revealed heterogeneity in sexual commitment within parasite populations

    • TotalSeq™ technology combines biotinylated antibodies with oligonucleotide barcodes for simultaneous protein and RNA detection

  • Multi-parameter Flow Cytometry:

    • Combining GDV1 Antibody, Biotin conjugated with other markers enables identification of transitional parasite states

    • Streptavidin conjugated to different fluorophores provides flexibility in panel design

  • Super-Resolution Microscopy:

    • Biotinylated antibodies paired with small streptavidin-conjugated fluorophores overcome resolution limitations

    • This enables detailed mapping of GDV1 distribution within heterochromatin domains

How can GDV1 Antibody, Biotin conjugated contribute to transmission-blocking strategies for malaria?

GDV1 Antibody, Biotin conjugated offers several avenues for developing transmission-blocking approaches:

  • Drug Screening Platforms:

    • High-throughput screening assays using GDV1 Antibody, Biotin conjugated can identify compounds that disrupt GDV1-HP1 interactions

    • Flow cytometry-based detection of GDV1 expression changes can serve as a readout for compound effectiveness

  • Mechanism Elucidation:

    • Detailed understanding of how GDV1 destabilizes heterochromatin to allow expression of gametocyte-specific genes

    • Identification of the specific regions within the C-terminal domain that are essential for function

  • Biomarker Development:

    • GDV1 detection as a predictive biomarker for gametocyte production potential in clinical isolates

    • Assessment of transmission potential in patient samples

  • Target Validation:

    • Confirmation of GDV1 as a viable target for transmission-blocking interventions through detailed molecular characterization of its interactions and functions

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