GIG1 Antibody

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Description

GIG1 Gene and Protein Context

GIG1 (Germination-Impaired Glyoxalase 1 or GlcNAc-Induced Gene 1) is a gene identified in Candida albicans and plants (e.g., Arabidopsis), with roles in GlcNAc metabolism and stress response. In C. albicans, GIG1 is induced by N-acetylglucosamine (GlcNAc) and localizes to the cytoplasm, where it influences chitin synthesis and sensitivity to inhibitors like nikkomycin Z . In plants, GIG1 detoxifies methylglyoxal (MG) during seed germination .

Key Features of GIG1:

OrganismFunctionKey Observations
Candida albicansGlcNAc metabolism, chitin synthesisDeletion mutants show resistance to nikkomycin Z
ArabidopsisMG detoxification in seedsRegulated by ABA/PIF1 signaling

GFP-Tagged GIG1 Fusion Proteins

In C. albicans, a GIG1-GFP fusion was engineered to track localization and expression. This approach uses anti-GFP antibodies for detection . Key findings:

  • Induction: GIG1-GFP is specifically induced by GlcNAc, not other sugars (e.g., galactose, glucosamine) .

  • Localization: Cytoplasmic, consistent with GlcNAc metabolic pathways .

Antibodies Targeting Related Proteins

Some antibodies in literature reference homologs or unrelated genes with similar names:

AntibodyTargetSourceApplication
3H1D8F5 anti-gigasDrosophila TSC2 homolog (Gigas)DSHB Western blot, immunoprecipitation
Anti-Glypican 1 (GPC1)Cell surface proteoglycanAddgene Data Hub Flow cytometry, immunocytochemistry
Recombinant human IgG1 mAbTCR beta chain (TRBV5-1)Phage display Therapeutic targeting in T-cell neoplasms

Note: The 3H1D8F5 antibody targets gigas (a Drosophila TSC2 homolog), distinct from fungal/plant GIG1 .

Research Gaps and Challenges

  1. Lack of Specific Reagents:

    • No validated antibodies for native GIG1 are reported. Detection relies on GFP tagging or homologous reagents.

    • Cross-reactivity risks exist with antibodies targeting conserved domains (e.g., glyoxalase activity).

  2. Functional Insights from Mutant Studies:

    • gig1Δ mutants in C. albicans show enhanced nikkomycin Z resistance, suggesting GIG1 modulates chitin synthase activity .

    • In Arabidopsis, GIG1 overexpression rescues germination defects under MG stress .

Potential Applications and Future Directions

ApplicationRationaleLimitations
Diagnostic probesDetect GIG1 expression in fungal/plant samplesRequires GFP-tagged strains or custom antibodies
Therapeutic targetingInhibit chitin synthesis in fungal pathogensGIG1’s role in virulence is indirect
Agricultural biotechEnhance seed resilience to oxidative stressGene-specific tools are needed

Product Specs

Buffer
**Preservative:** 0.03% Proclin 300
**Constituents:** 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
GIG1 antibody; EBO30 antibody; OSD1 antibody; UVI4-LIKE antibody; At3g57860 antibody; T10K17.70Protein GIGAS CELL1 antibody; Protein ENHANCER OF BON1-2 30 antibody; Protein OMISSION OF SECOND DIVISION1 antibody; Protein UV-B-INSENSITIVE 4-like antibody
Target Names
GIG1
Uniprot No.

Target Background

Function
GIG1 Antibody is a negative regulator of the anaphase-promoting complex/cyclosome (APC/C) ubiquitin ligase. It plays a crucial role in ensuring proper mitotic and meiotic progression, cell fate determination, and entry into both meiosis I and meiosis II. GIG1 prevents endomitosis by selectively inhibiting APC/C(CDC20). It is essential for megagametophyte and endosperm development. Additionally, GIG1 triggers the accumulation of mitotic cyclins (e.g., CYCB1-1 and CYCB1-2). Interestingly, GIG1 confers immunity to bacterial pathogens such as Pseudomonas syringae pv. tomato DC3000, which is associated with increased expression of disease resistance (R) genes. GIG1 and PANS1 work together in a network that links centromere cohesion and cell cycle progression by regulating APC/C activity.
Gene References Into Functions
  1. A functional network involving OSD1, CYCA1;2/TAM, and TDM governs three critical steps in meiotic progression, with OSD1 acting as a meiotic APC/C inhibitor. [OSD1] PMID: 22844260
  2. This functional network composed of OSD1, CYCA1;2/TAM, and TDM controls three key steps in meiotic progression, where OSD1 functions as a meiotic APC/C inhibitor. PMID: 22844260
  3. Combining mutations in tam and osd1 genes results in a disruption of the prophase to meiosis I transition during male meiosis, leading to the production of tetraploid spores and gametes. [OSD1] PMID: 20585549
Database Links

KEGG: ath:AT3G57860

STRING: 3702.AT3G57860.1

UniGene: At.21178

Tissue Specificity
Expressed in rapidly dividing tissues such as shoot apical meristem and young leaves. Associated with cell division but also with specific cell types.

Q&A

Here’s a structured FAQ collection for researchers studying IgG1 antibodies, based on academic research scenarios and synthesized from peer-reviewed studies:

What experimental design considerations are critical for studying IgG1 antibody efficacy in vaccine trials?

  • Key factors:

    • Allotype profiling: Incorporate IgG1 allotyping (e.g., G1m1 vs. G1m3) via PCR/ELISA to account for genetic variability in subclass distribution and Fc-mediated functions .

    • Subclass ratios: Measure IgG1:IgG2 ratios, as elevated IgG1 correlates with stronger FcγR engagement (ADCC/ADCP) .

    • Functional assays: Include FcγR-dimer binding assays to quantify effector function potential .

How do IgG1 glycosylation patterns influence antibody-dependent cellular cytotoxicity (ADCC)?

  • Methodological approach:

    • Use glycoengineering (e.g., bisected, afucosylated Fc carbohydrates) to enhance FcγRIIIA binding .

    • Compare ADCC activity of glycoengineered vs. wild-type IgG1 using in vitro tumor cell lines (e.g., KRAS-mutant models) .

    • Validate with orthogonal assays (e.g., FcγRIIIa-binding ELISAs and xenograft models) .

What are the limitations of current IgG1 quantification methods in large clinical cohorts?

  • Integrated workflows:

    • Combine immunosorbance with LC-MS glycopeptide profiling for simultaneous quantitation and glycosylation analysis .

    • Use stable isotope-labeled standards (e.g., SILuMAB) to improve precision (technical variation <1%, intermediate precision ~44%) .

    • Prioritize proteotypic peptides (e.g., GPSVFPLAPSSK) over glycopeptides for linear quantitation .

How do IgG1 allotypes (e.g., G1m1 vs. G1m3) impact vaccine-induced immune responses?

  • Findings:

    AllotypeIgG1:IgG2 RatioFcγR EngagementClinical Implication
    G1m1HighStrong ADCC/ADCPPredisposition to enhanced effector functions
    G1m3LowModerateReduced Fc-mediated efficacy in vaccine settings
    • Recommendation: Stratify clinical trial cohorts by allotype to control for genetic bias .

What strategies resolve contradictions in IgG1 functional data across in vitro and in vivo models?

  • Approach:

    • Validate glycoengineered IgG1 (e.g., GA201) in orthotopic xenografts with KRAS-mutant tumors to confirm ADCC retention despite downstream oncogenic signaling .

    • Use combinatorial metrics:

      • In vitro: FcγRIIIa affinity, ligand-blocking potency (IC50).

      • In vivo: Tumor growth inhibition, survival curves with chemotherapy synergy .

How can researchers standardize IgG1 measurements across heterogeneous clinical studies?

  • Framework:

    • Adopt glycopeptide-centric LC-MS workflows to unify quantitation and glycosylation profiling .

    • Address variability:

      • Biological: IgG1 concentrations range 100–10,000 ng/mL in vaccination cohorts .

      • Technical: Use composite metrics (glycopeptide + peptide signals) to mitigate ionization bias .

What protocols optimize FcγR engagement for therapeutic IgG1 antibodies?

  • Glycoengineering: Modify Fc regions to reduce fucosylation (e.g., GlycoMab technology) .

  • Functional validation:

    • Compare binding to high/low-affinity FcγRIIIA variants .

    • Test ADCC in the presence of physiologic IgG concentrations to mimic human serum .

How should researchers address discordant IgG1 subclass data in multi-cohort studies?

  • Troubleshooting steps:

    • Confirm assay specificity (e.g., IgG1 vs. IgG3 cross-reactivity) .

    • Use correlation matrices to identify confounding variables (e.g., IgG1-IgG3 correlation: r = 0.54) .

    • Replicate findings in independent cohorts using orthogonal methods (e.g., Luminex vs. LC-MS) .

Table 1: Impact of IgG1 Glycoengineering on ADCC Activity

ParameterGA201 (Glycoengineered)Cetuximab (Wild-Type)
FcγRIIIA affinity++++++
ADCC potency3–10× higherBaseline
In vivo survivalSignificant improvementModerate

Table 2: IgG1 Quantitation Method Performance

MetricGlycopeptide-BasedPeptide-Based (GPS)
Linear rangeUp to 10^4 ng/mLBroad
Correlation (vs. Luminex)r = 0.84r = 0.76
Precision (RSD)5–8%10–15%

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