GPAT4 Antibody

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Description

Applications of GPAT4 Antibodies

GPAT4 antibodies are primarily employed in Western blotting (WB) to detect protein expression levels. Additional applications include:

ApplicationDetailsSources
Western BlottingDetects GPAT4 in lysates from liver, adipose tissue, and testis; dilution: 1:500–2000
ImmunohistochemistryUsed at 1:200–1:500 for tissue localization studies (e.g., Sigma-Aldrich HPA016471)
Cell Culture StudiesAnalyzes overexpression effects in hepatocytes or spermatogenic cells

Key Limitations:

  • Limited reactivity to non-human/mouse species.

  • Requires optimization for non-WB applications (e.g., immunoprecipitation).

Research Findings on GPAT4 Function

GPAT4 antibodies have elucidated critical roles in lipid metabolism, insulin signaling, and cellular homeostasis:

Role in Lipid Metabolism

  • LPA Synthesis: GPAT4 converts glycerol-3-phosphate to LPA, a precursor for phospholipids and triacylglycerols (TAGs) .

  • ER-Mitochondrial Crosstalk: Saturated LPA produced by GPAT4 inhibits autophagy via omegasome formation at ER-mitochondrial contact sites .

Insulin Resistance and Glucose Homeostasis

  • Hepatic Insulin Resistance: Overexpression in hepatocytes reduces insulin-stimulated glycogen synthesis and Akt phosphorylation, impairing glucose metabolism .

  • mTORC2 Regulation: GPAT4 suppresses mTORC2 activity by disrupting rictor association, linking lipid synthesis to insulin signaling .

Tissue-Specific Roles

  • Testicular Development: Overexpression in GC-1spg cells (a spermatogenic cell line) increases proliferation via LPA-mediated GPCR signaling .

  • Brown Adipose Tissue (BAT): Preferentially expressed in BAT, influencing thermogenesis and lipid storage .

Western Blotting Protocol

  1. Sample Preparation: Lyse cells in RIPA buffer (50 mM Tris, 150 mM NaCl, 1% NP-40, 0.1% SDS) .

  2. SDS-PAGE: Resolve proteins on 8–10% gels.

  3. Blotting: Transfer to PVDF membranes.

  4. Primary Antibody: Incubate with GPAT4 antibody (1:1000–1:2000) at 4°C overnight.

  5. Detection: Use HRP-conjugated secondary antibodies and ECL substrates .

Troubleshooting:

  • No Signal: Check antibody dilution, protein loading (20–50 µg/lane), and blocking conditions (5% BSA).

  • Cross-Reactivity: Validate specificity using knockout cell lines or peptide competition assays .

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M Phosphate Buffered Saline (PBS), pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
GPAT4; At1g01610; F22L4.15; Glycerol-3-phosphate 2-O-acyltransferase 4; AtGPAT4; Glycerol-3-phosphate acyltransferase 4
Target Names
GPAT4
Uniprot No.

Target Background

Function
GPAT4 catalyzes the transfer of an acyl group from acyl-ACP to the sn-2 position of glycerol-3-phosphate, a critical step in cutin biosynthesis.
Database Links

KEGG: ath:AT1G01610

STRING: 3702.AT1G01610.1

UniGene: At.22475

Protein Families
GPAT/DAPAT family
Subcellular Location
Membrane; Multi-pass membrane protein.
Tissue Specificity
Widely expressed at high level. Highly expressed in seedlings, developing seedlings and flower buds.

Q&A

Frequently Asked Questions (FAQs) for GPAT4 Antibody in Academic Research

Advanced Research Questions

How to resolve discrepancies in GPAT4 localization reports between ER and LDs?

  • Stepwise strategy:

    • Dynamic localization analysis: Treat cells with oleate to induce LD biogenesis. Monitor GPAT4 redistribution via live-cell imaging (e.g., GFP-tagged GPAT4) .

    • Subcellular fractionation: Isolate ER and LD fractions via density-gradient centrifugation. Validate purity using organelle markers (e.g., calnexin for ER, PLIN2 for LDs).

    • Knockdown validation: Deplete membrane-trafficking proteins (e.g., TRAPP complex components, COPII coat proteins) and quantify GPAT4 mislocalization using IF .

How to design functional assays linking GPAT4 antibody-based detection to lipid metabolism?

  • Integrated workflow:

    • Lipidomic profiling: Combine GPAT4 immunoprecipitation with LC-MS to identify associated lipids (e.g., triacylglycerols, phosphatidic acid).

    • CRISPR/Cas9 KO models: Compare lipid droplet size/distribution in GPAT4-KO vs. wild-type cells using antibody-stained confocal z-stacks .

    • Rescue experiments: Overexpress GPAT4 mutants (e.g., hydrophobic hairpin deletion) and quantify LD morphology .

Data Interpretation & Troubleshooting

How to address inconsistent GPAT4 antibody signals in cancer vs. metabolic disease models?

FactorCancer ModelsMetabolic Disease Models
Expression levelsUpregulated in HCC Downregulated in obesity
Post-translational modificationsPhosphorylation at Ser-209 Palmitoylation at Cys-173
Localization biasNuclear-cytoplasmic ER-LD shuttling
  • Recommendations:

    • Optimize antibody dilution ratios separately for each model.

    • Include phosphatase/palmitoylation inhibitors during lysis to preserve modification-dependent epitopes.

How to validate GPAT4’s role in ER-to-LD targeting using antibody-based assays?

  • Key experiments:

    • Co-depletion studies: Knock down GPAT4 alongside ERES components (e.g., Sec23/Sec24) and quantify LD targeting efficiency via IF .

    • Pulse-chase labeling: Track newly synthesized GPAT4 using Click-iT® AHA labeling, followed by antibody-based detection at ER vs. LD compartments over time .

Cross-Disciplinary Applications

Can GPAT4 antibody be used to study crosstalk between lipid metabolism and immune checkpoints?

  • Evidence-based approach:

    • Correlate GPAT4 expression (via IHC) with immune checkpoint markers (e.g., PD-L1, CTLA-4) in HCC tissues .

    • Use TIDE algorithm to predict immunotherapy response in GPAT4-high vs. low tumors, leveraging TCGA data .

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