At5g27670 Antibody

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Description

At5g27670 Gene Overview

The locus At5g27670 corresponds to the FAS2 gene in Arabidopsis thaliana, which encodes a subunit of chromatin assembly factor-1 (CAF-1). This protein is critical for DNA replication-coupled nucleosome assembly and epigenome maintenance . Mutations in FAS2 (e.g., fas2 mutants) disrupt histone H3K27 monomethylation (H3K27me1) and lead to developmental abnormalities .

Antibody Characterization Challenges

While histone modifications (e.g., H3K27me1) are frequently studied using antibody-based techniques like chromatin immunoprecipitation (ChIP), the search results highlight significant challenges in antibody validation:

  • Specificity Issues: Many antibodies fail to distinguish between closely related histone isoforms (e.g., H3.1 vs. H3.3) .

  • Validation Requirements: Reliable antibodies must demonstrate binding to the target epitope in complex protein mixtures and avoid cross-reactivity .

Absence of At5g27670-Specific Antibody Data

Despite extensive searches across databases (e.g., PLAbDab , AbDb ) and research articles , no studies explicitly describing an antibody targeting the FAS2 protein (At5g27670) were identified. Potential reasons include:

  • Limited Commercial Availability: Antibodies against plant-specific chromatin factors are less commonly developed compared to human or model animal targets.

  • Technical Hurdles: Producing antibodies that distinguish FAS2 from homologous proteins requires rigorous validation, which may not yet be published .

Recommendations for Future Research

To address this gap, the following steps are proposed:

  1. Antigen Design: Use recombinant FAS2 protein or peptide epitopes for immunization.

  2. Validation Workflow:

    • Western Blot: Test specificity in fas2 mutants vs. wild-type plants.

    • Immunofluorescence: Confirm subcellular localization in root tip cells .

  3. Data Sharing: Deposit characterization data in public repositories (e.g., CiteAb, Antibody Registry) to enhance reproducibility .

Key Research Gaps

AspectCurrent StatusRequired Action
Antibody ExistenceNot documentedDevelop/validate new reagents
Functional StudiesLimited to genetic mutants Integrate antibody-based assays
Database EntriesAbsent in AbDb/PLAbDab Submit validated antibody data

Product Specs

Buffer
**Preservative:** 0.03% Proclin 300
**Constituents:** 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
Made-to-order (14-16 weeks)
Synonyms
At5g27670 antibody; F15A18.130 antibody; Probable histone H2A.5 antibody; HTA7 antibody
Target Names
At5g27670
Uniprot No.

Target Background

Function
Histone H2A.W is a core component of the nucleosome. Nucleosomes are responsible for wrapping and compacting DNA into chromatin, thereby limiting DNA accessibility to cellular machinery that requires DNA as a template. Histones play a pivotal role in regulating transcription, DNA repair, DNA replication, and chromosomal stability. DNA accessibility is regulated through a complex system of post-translational modifications of histones, also known as the histone code, and nucleosome remodeling.
Gene References Into Functions
  1. H2A.W specifically marks heterochromatin and functions synergistically with H3K9me2 and DNA methylation to maintain transposon silencing. In vitro studies demonstrate that H2A.W enhances chromatin condensation by promoting fiber-to-fiber interactions through its C-terminal motif. In vivo, H2A.W is essential for heterochromatin condensation, highlighting its crucial role in heterochromatin organization. [H2A.W.7] PMID: 24995981
Database Links

KEGG: ath:AT5G27670

STRING: 3702.AT5G27670.1

UniGene: At.19946

Protein Families
Histone H2A family
Subcellular Location
Nucleus. Chromosome.

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