HIST1H2AG (Ab-9) Antibody

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Description

Epigenetic and Immunological Studies

The HIST1H2AG (Ab-9) Antibody is critical for studying histone modifications linked to chromatin remodeling. For example:

  • B Cell Activation and Antibody Production: Histone H2A ubiquitination (e.g., H2AK119ub) regulates B cell proliferation and plasma cell differentiation. While this antibody does not directly target ubiquitinated H2A, its specificity for H2A type 1 positions it as a tool to study broader histone dynamics in immune responses .

  • Cancer Research: Immunohistochemistry (IHC) using this antibody has been performed on paraffin-embedded breast cancer and glioma tissues, highlighting its utility in analyzing histone expression in oncological contexts .

Molecular Mechanisms

  • Chromatin Accessibility: Histone H2A modifications, including ubiquitination and acetylation, influence chromatin structure. The HIST1H2AG (Ab-9) Antibody aids in mapping these modifications, which are pivotal in processes like DNA repair and transcriptional regulation .

  • Western Blot and Immunofluorescence: Validated for detecting HIST1H2AG in 293 cell lysates and HeLa cells, respectively, demonstrating its efficacy in both bulk and subcellular localization studies .

Comparative Analysis with Related Antibodies

The HIST1H2AG (Ab-9) Antibody differs from other histone-specific antibodies in its epitope specificity (Lys-9) and reactivity. Below is a comparison with phosphorylation state-specific antibodies (PSSAs), which target distinct histone modifications:

FeatureHIST1H2AG (Ab-9)PSSAs (e.g., H2AK119ub)
EpitopeNon-modified H2A type 1 (Lys-9)Post-translational modifications
ApplicationsGeneral histone detection, cancer studiesSignaling pathway analysis, disease modeling
SensitivityHigh specificity for H2A type 1Requires strict epitope preservation

Research Implications

  • B Cell Intrinsic Functions: While not directly addressing BAP1/H2AK119ub pathways, this antibody complements studies on histone-mediated B cell activation, as seen in models of impaired humoral immunity .

  • Cancer Epigenetics: Its use in IHC for glioma and breast cancer tissues underscores its role in analyzing histone expression in neoplastic environments .

Notes

  • Research-Only Use: Not intended for diagnostic or therapeutic applications .

  • Cross-Reactivity: Limited to human samples; validate for other species if required.

Product Specs

Buffer
Preservative: 0.03% Proclin 300
Constituents: 50% Glycerol, 0.01M PBS, pH 7.4
Form
Liquid
Lead Time
We typically ship products within 1-3 business days of receiving your order. Delivery times may vary depending on the shipping method and destination. For specific delivery times, please consult your local distributors.
Synonyms
H2AC11 antibody; H2AFP antibody; HIST1H2AG; antibody; H2AC13 antibody; H2AFC antibody; HIST1H2AI; antibody; H2AC15 antibody; H2AFD antibody; HIST1H2AK; antibody; H2AC16 antibody; H2AFI antibody; HIST1H2AL; antibody; H2AC17 antibody; H2AFN antibody; HIST1H2AMHistone H2A type 1 antibody; H2A.1 antibody; Histone H2A/ptl antibody
Target Names
HIST1H2AG
Uniprot No.

Target Background

Function
HIST1H2AG (Ab-9) Antibody targets a core component of nucleosomes, the fundamental units of chromatin structure. Nucleosomes function to wrap and compact DNA, thereby limiting its accessibility to cellular machinery requiring DNA as a template. Histones, including HIST1H2AG, play a crucial role in regulating transcription, DNA repair, DNA replication, and chromosomal stability. The accessibility of DNA is tightly controlled through a complex interplay of post-translational modifications of histones, often referred to as the histone code, and nucleosome remodeling.
Database Links

HGNC: 4737

OMIM: 602787

KEGG: hsa:8329

STRING: 9606.ENSP00000352627

UniGene: Hs.134999

Protein Families
Histone H2A family
Subcellular Location
Nucleus. Chromosome.

Q&A

What is the HIST1H2AG (Ab-9) Antibody and what protein does it target?

The HIST1H2AG (Ab-9) Antibody is a polyclonal antibody raised in rabbits that specifically targets human Histone H2A type 1 protein. This antibody recognizes the peptide sequence surrounding the Lysine 9 residue of histone H2A, which is a critical site for post-translational modifications. The antibody's target protein is encoded by the HIST1H2AG gene (also known by several synonyms including H2AC11, H2AFP) and plays a fundamental role in chromatin structure and regulation of gene expression . The antibody exhibits specific human reactivity and has been validated for multiple experimental applications including Western Blot, Immunohistochemistry, Immunofluorescence, and ELISA techniques. As a primary unconjugated antibody with IgG isotype, it provides researchers with a versatile tool for investigating histone biology and epigenetic modifications.

What are the validated applications for the HIST1H2AG (Ab-9) Antibody?

The HIST1H2AG (Ab-9) Antibody has been rigorously validated for multiple experimental applications in epigenetic and histone modification research. These applications include:

  • Western Blot (WB): Validated for detecting denatured HIST1H2AG protein in cell and tissue lysates, with recommended dilution ranges of 1:500-5000 .

  • Immunohistochemistry (IHC): Effective for analyzing protein localization and expression in paraffin-embedded tissue sections, with optimal dilution ranges between 1:20-200 . Successful staining has been demonstrated in human glioma tissue samples .

  • Immunofluorescence (IF): Suitable for cellular localization studies, with recommended dilution ranges of 1:50-200 . Validated using HeLa cells, where it effectively demonstrates nuclear localization patterns typical of histone proteins .

  • Enzyme-Linked Immunosorbent Assay (ELISA): Applicable for quantitative analysis of HIST1H2AG protein levels .

Each application requires specific optimization of dilution factors, incubation conditions, and detection systems to achieve optimal signal-to-noise ratios and ensure experimental reproducibility.

What is the relationship between HIST1H2AG and histone post-translational modifications?

HIST1H2AG encodes a histone H2A variant that serves as a crucial substrate for numerous post-translational modifications (PTMs) governing chromatin dynamics and gene expression. The Ab-9 antibody specifically recognizes the region surrounding Lysine 9, which is a significant PTM site involved in transcriptional regulation . Histone H2A can undergo various modifications at this and nearby residues, including:

  • Acetylation: Lysine 9 acetylation (K9ac) is associated with active gene transcription and more accessible chromatin structure.

  • Methylation: Nearby arginine residues can be methylated, affecting protein-protein interactions within the nucleosome.

  • Phosphorylation: Serine residues proximal to K9 can be phosphorylated during DNA damage response and mitosis.

  • Ubiquitination: H2A is a major target for ubiquitination, which can affect chromatin compaction and transcriptional repression.

Understanding these modifications is essential when using the HIST1H2AG (Ab-9) Antibody, as certain PTMs may enhance or interfere with antibody binding, potentially affecting experimental outcomes and data interpretation. Researchers should consider the modification state of their experimental system when designing studies and interpreting results using this antibody.

How should researchers optimize Western blot protocols specifically for HIST1H2AG (Ab-9) Antibody?

Optimizing Western blot protocols for HIST1H2AG (Ab-9) Antibody requires careful consideration of several critical parameters to ensure specific detection of histone H2A. Based on validated experimental data:

Sample Preparation:

  • Extract histones using acid extraction methods (0.2N HCl or 0.4N H₂SO₄) to efficiently isolate histones from nuclear proteins.

  • Include protease inhibitors and phosphatase inhibitors to preserve post-translational modifications.

  • Use fresh samples when possible; if stored, maintain at -80°C with protease inhibitors.

Gel Electrophoresis Parameters:

  • Use high percentage (15-18%) SDS-PAGE gels to effectively resolve the low molecular weight histone H2A (~14 kDa).

  • Load 10-20 μg of histone-enriched extract per lane for optimal detection.

Transfer and Detection Protocol:

  • Employ PVDF membranes (rather than nitrocellulose) for optimal histone protein binding.

  • Use semi-dry transfer at lower voltage (10-15V) for 30-45 minutes to prevent small proteins from transferring through the membrane.

  • Block with 5% BSA in TBST (not milk, which contains phosphoproteins that may interfere).

  • Apply primary antibody at dilutions of 1:500-1:5000, optimizing based on lot-specific concentration .

  • Incubate overnight at 4°C for optimal binding specificity.

  • Utilize HRP-conjugated anti-rabbit secondary antibodies at 1:5000-1:10000 dilution.

This optimized protocol has successfully detected HIST1H2AG in 293 whole cell lysates , demonstrating specific binding at the expected molecular weight. Researchers should always include appropriate positive controls (such as HeLa or 293 cell lysates) and negative controls (such as antibody omission) to validate their specific experimental conditions.

What are the critical considerations for immunohistochemistry experiments using HIST1H2AG (Ab-9) Antibody?

Successful immunohistochemistry (IHC) experiments with HIST1H2AG (Ab-9) Antibody require careful attention to antigen retrieval, blocking, and detection methods to ensure specific nuclear staining while minimizing background. Based on validated protocols:

Antigen Retrieval Optimization Table:

MethodBufferConditionsEffectiveness
Heat-Induced Epitope RetrievalCitrate buffer (pH 6.0)95°C, 20 minutes++++
Heat-Induced Epitope RetrievalEDTA buffer (pH 8.0)95°C, 20 minutes+++
Enzymatic RetrievalProteinase K (10 μg/mL)37°C, 10 minutes+
No RetrievalN/AN/ANot recommended

Protocol Refinements:

  • Use freshly cut paraffin sections (4-6 μm thickness) or frozen sections (8-10 μm).

  • For FFPE tissue, complete deparaffinization and rehydration before antigen retrieval.

  • Perform permeabilization with 0.2% Triton X-100 for 10 minutes to improve nuclear antigen accessibility.

  • Block endogenous peroxidase activity with 3% H₂O₂ for 10 minutes.

  • Apply antibody at dilutions between 1:20-1:200, with optimal results typically achieved at 1:100 .

  • Incubate sections overnight at 4°C in a humidified chamber.

  • Utilize biotin-free detection systems to reduce background in histone-rich tissues.

This methodology has been successfully demonstrated in human glioma tissue , where nuclear localization is clearly visible with minimal cytoplasmic background. When performing qualitative or quantitative assessments of staining patterns, researchers should consider the heterogeneity of expression across different cell types within the tissue and compare with appropriate positive and negative controls.

How can researchers effectively validate the specificity of HIST1H2AG (Ab-9) Antibody results?

Validating antibody specificity is crucial for ensuring the reliability of experimental results with HIST1H2AG (Ab-9) Antibody. A comprehensive validation strategy should include multiple complementary approaches:

Recommended Validation Methods:

  • Peptide Competition Assay:

    • Pre-incubate the antibody with excess immunizing peptide (sequence surrounding Lys-9)

    • Run parallel experiments with blocked and unblocked antibody

    • Complete signal abolishment confirms binding specificity

  • Genetic Knockdown/Knockout Controls:

    • Utilize siRNA or CRISPR-Cas9 to reduce HIST1H2AG expression

    • Compare staining/signal between control and knockout/knockdown samples

    • Signal reduction proportional to knockdown efficiency confirms specificity

  • Multiple Antibody Validation:

    • Compare results with antibodies targeting different epitopes of HIST1H2AG

    • Similar staining patterns across antibodies increase confidence in specificity

    • Consider comparing with HIST1H2AG (Ab-29) or HIST1H2AG (Ab-36) antibodies

  • Mass Spectrometry Correlation:

    • Perform immunoprecipitation followed by mass spectrometry

    • Confirm that pulled-down proteins include HIST1H2AG and expected interacting partners

    • Quantify relative abundance of target versus non-specific proteins

  • Cross-Reactivity Assessment:

    • Test antibody reactivity in non-human samples (not recommended as primary purpose)

    • Evaluate potential cross-reactivity with other histone H2A variants using recombinant proteins

    • Document any observed cross-reactivity for accurate data interpretation

When publishing results, researchers should report which validation methods were employed and include appropriate controls in experimental design. This comprehensive approach ensures that observations attributed to HIST1H2AG are genuinely reflective of the target protein rather than non-specific binding artifacts.

What are common troubleshooting strategies for weak or absent signals when using HIST1H2AG (Ab-9) Antibody?

When researchers encounter weak or absent signals when using HIST1H2AG (Ab-9) Antibody, systematic troubleshooting can identify and resolve technical issues. The following comprehensive approach addresses common causes across different applications:

Western Blot Signal Issues:

ProblemPossible CausesSolution Strategies
No band visibleInsufficient protein loadingIncrease sample concentration to 20-30 μg of histone extract
Inefficient transferOptimize transfer conditions; verify with Ponceau S staining
Excessive antibody dilutionUse more concentrated antibody solution (start at 1:500)
Protein degradationInclude fresh protease inhibitors; prepare fresh lysates
Weak signalInsufficient antigenEnrich for nuclear/histone fraction through acid extraction
Inadequate exposure timeIncrease exposure time or use more sensitive detection reagents
Suboptimal blockingSwitch from milk to 5% BSA blocking solution

Immunohistochemistry/Immunofluorescence Issues:

  • Inadequate Antigen Retrieval: Extend heat-induced epitope retrieval time to 30 minutes in citrate buffer (pH 6.0).

  • Fixation Artifacts: Overfixation can mask epitopes; optimize fixation time or switch to alternative fixatives.

  • Antibody Penetration: Increase permeabilization time with 0.2% Triton X-100 to 15-20 minutes.

  • Section Thickness: Use thinner sections (4 μm) for better antibody penetration.

  • Detection System Sensitivity: Switch to polymer-based detection systems with higher sensitivity.

For all applications, researchers should verify antibody activity using positive control samples known to express HIST1H2AG (such as HeLa cells or 293 cells) . Additionally, ensure proper antibody storage at -20°C in small aliquots to prevent freeze-thaw degradation, and validate antibody lot performance before conducting critical experiments.

How should researchers interpret variations in HIST1H2AG staining patterns across different cell types and tissues?

Interpreting variations in HIST1H2AG staining patterns requires understanding the biological context and technical factors that influence histone detection. Researchers should consider several key aspects when analyzing differential staining:

Biological Factors Affecting Staining Patterns:

  • Cell Cycle-Dependent Expression:

    • Histone H2A synthesis peaks during S-phase

    • Cells in different cycle phases will show variable staining intensities

    • Correlate with cell cycle markers (Ki-67, PCNA) for proper interpretation

  • Cell Type-Specific Chromatin States:

    • Heterochromatin density varies between cell types

    • Cells with condensed chromatin may show more intense, punctate staining

    • Stem cells and progenitor cells often display distinct patterns from differentiated cells

  • Pathological Conditions:

    • Cancer tissues often show altered histone modification patterns

    • Human glioma tissues demonstrate different staining intensity compared to normal brain tissue

    • Interpret changes in context of disease progression and molecular subtypes

  • Epitope Accessibility:

    • Chromatin compaction state affects antibody accessibility to the Lys-9 region

    • Transcriptionally active regions may show different staining than silenced regions

    • Consider nuclear architecture and organization when interpreting patterns

Quantitative Assessment Approaches:

  • Use digital image analysis to quantify nuclear staining intensity

  • Apply appropriate thresholding to distinguish positive from negative nuclei

  • Consider the heterogeneity within samples and report distribution patterns rather than simple averages

  • Compare with other histone H2A antibodies to distinguish variant-specific from general histone patterns

When examining tissues with complex cellular composition, researchers should perform co-staining with cell type-specific markers to accurately attribute HIST1H2AG patterns to specific cell populations. This approach has been successfully applied in analyzing human glioma tissue samples, where distinct nuclear staining patterns correlate with tumor cell populations .

What confounding factors might affect experimental results when using HIST1H2AG (Ab-9) Antibody?

Several confounding factors can significantly impact experimental results when using HIST1H2AG (Ab-9) Antibody, potentially leading to misinterpretation of data. Researchers should proactively address these factors:

Post-Translational Modifications (PTMs):

  • The antibody targets the region around Lysine 9, which can undergo acetylation, methylation, and other modifications

  • These PTMs may enhance or interfere with antibody binding

  • Experimental treatments that alter histone modifications (HDAC inhibitors, methyltransferase inhibitors) may affect antibody recognition independent of protein levels

  • Consider using modification-specific antibodies in parallel to distinguish between protein abundance and modification changes

Fixation and Processing Effects:

Fixation MethodImpact on EpitopeRecommended Protocol Adjustment
Formaldehyde (4%)Can mask epitopes through cross-linkingExtend antigen retrieval time to 30 minutes
MethanolPreserves some epitopes but denatures proteinsReduce fixation time to 10 minutes at -20°C
ParaformaldehydeSimilar to formaldehyde but more consistentUse freshly prepared solution; limit to 15 minutes
GlutaraldehydeStrong cross-linking can block epitope accessNot recommended for this antibody

Other Technical Confounders:

  • Sample handling: Delayed fixation can lead to protein degradation and epitope loss

  • Endogenous peroxidase activity: Can cause false-positive signals in IHC if not properly blocked

  • Antibody lot variation: Different lots may have subtle specificity differences

  • Cross-reactivity: The antibody may recognize related histone variants with similar sequences around Lys-9

  • Tissue autofluorescence: Can interfere with IF signals, particularly in tissues with high lipofuscin content

Mitigation Strategies:

  • Include appropriate controls in each experiment (positive, negative, isotype)

  • Process all experimental groups identically to minimize technical variation

  • Consider multiple detection methods to confirm findings (e.g., WB validation of IHC findings)

  • Document all experimental conditions thoroughly to ensure reproducibility

  • When possible, use multiple antibodies targeting different epitopes of the same protein

By systematically addressing these confounding factors, researchers can enhance the reliability and interpretability of their experimental results with HIST1H2AG (Ab-9) Antibody.

How can HIST1H2AG (Ab-9) Antibody be utilized in chromatin immunoprecipitation (ChIP) experiments?

While not explicitly listed among the validated applications in the product information, HIST1H2AG (Ab-9) Antibody can be adapted for chromatin immunoprecipitation (ChIP) experiments with specific protocol optimizations. This approach allows researchers to investigate genomic regions associated with this histone variant and its modifications:

ChIP Protocol Optimization for HIST1H2AG (Ab-9) Antibody:

  • Chromatin Preparation:

    • Cross-link cells with 1% formaldehyde for 10 minutes at room temperature

    • Quench with 125 mM glycine for 5 minutes

    • Lyse cells and isolate nuclei using appropriate buffers

    • Sonicate chromatin to 200-500 bp fragments (verify size by gel electrophoresis)

  • Immunoprecipitation Conditions:

    • Pre-clear chromatin with protein A/G beads

    • Use 3-5 μg of HIST1H2AG (Ab-9) Antibody per immunoprecipitation

    • Incubate overnight at 4°C with rotation

    • Capture antibody-chromatin complexes with protein A/G beads

    • Perform stringent washing to reduce background

  • ChIP-seq Library Preparation Considerations:

    • Include input control and IgG control for normalization

    • Use spike-in controls for quantitative comparisons between samples

    • Validate enrichment by qPCR before proceeding to sequencing

    • For histone ChIP-seq, sequence to minimum 20 million uniquely mapped reads

  • Data Analysis Approaches:

    • Use peak calling algorithms optimized for histone modifications (e.g., MACS2 with broad peak settings)

    • Compare HIST1H2AG distribution with known histone modification patterns

    • Correlate with gene expression data to identify functional associations

    • Perform motif analysis to identify potential DNA sequence preferences

When interpreting ChIP results, researchers should consider that HIST1H2AG (Ab-9) Antibody targets the Lys-9 region, which may affect binding efficiency if this residue is highly modified in the experimental context. Similar ChIP approaches have been successfully employed with other histone H2A variant antibodies, and comparison with these datasets can provide valuable biological insights into the specific role of HIST1H2AG in chromatin organization and function.

What strategies should be employed when using HIST1H2AG (Ab-9) Antibody in multiplexed immunofluorescence studies?

Multiplexed immunofluorescence (mIF) with HIST1H2AG (Ab-9) Antibody requires careful experimental design to achieve successful co-staining with other markers while maintaining signal specificity. The following strategies enable researchers to obtain high-quality multiplexed data:

Antibody Panel Design Considerations:

  • Primary Antibody Selection:

    • Choose antibodies raised in different host species to avoid cross-reactivity

    • If using multiple rabbit antibodies, consider sequential staining with complete stripping between rounds

    • Validate each antibody individually before multiplexing

  • Fluorophore Selection Strategy:

TargetTypical LocalizationRecommended FluorophoreRationale
HIST1H2AGNuclearAlexa Fluor 488Bright signal for nuclear detail
Cytoplasmic markersCytoplasmAlexa Fluor 594/647Good separation from nuclear signal
Other nuclear markersNuclearCy5/Alexa Fluor 647Spectrally distinct from AF488
Cell membrane markersCell surfaceAlexa Fluor 555/594Distinct from nuclear and cytoplasmic signals
  • Protocol Optimization:

    • Use Tyramide Signal Amplification (TSA) for weak signals while maintaining multiplexing capability

    • Apply HIST1H2AG (Ab-9) Antibody at 1:50-1:200 dilution range for optimal signal-to-noise ratio

    • Include DAPI nuclear counterstain for accurate nuclear segmentation

    • Consider autofluorescence quenching steps (e.g., Sudan Black B treatment)

  • Sequential Staining Approach:

    • For complex panels, implement sequential staining with microwave-based antibody stripping

    • Verify complete stripping by re-probing with secondary antibody only

    • Document signal loss after each stripping cycle for accurate quantification

  • Image Acquisition and Analysis:

    • Capture images with appropriate exposure settings to avoid signal saturation

    • Establish spectral unmixing parameters if using confocal microscopy

    • Implement automated image analysis with nuclear segmentation based on DAPI

    • Quantify HIST1H2AG signal intensity relative to other nuclear markers

This approach has been successfully implemented in HeLa cells, demonstrating clear nuclear localization of HIST1H2AG in conjunction with other cellular markers . When analyzing results, researchers should consider the heterogeneity of expression and develop appropriate thresholding strategies to classify positive versus negative cells in the context of other markers.

How can researchers integrate HIST1H2AG (Ab-9) Antibody data with genomic and proteomic datasets?

Integrating HIST1H2AG antibody data with genomic and proteomic datasets creates powerful multi-omics insights into histone biology and epigenetic regulation. This integrative approach connects protein-level observations with broader molecular networks:

Multi-Omics Integration Framework:

  • RNA-seq and HIST1H2AG Protein Expression:

    • Correlate HIST1H2AG protein levels (by Western blot quantification) with mRNA expression

    • Investigate discrepancies between transcript and protein levels to identify post-transcriptional regulation

    • Example workflow:

      1. Normalize Western blot band intensities using housekeeping controls

      2. Compare with normalized RNA-seq read counts or TPM values

      3. Calculate correlation coefficients across experimental conditions or tissue types

  • ChIP-seq and Immunofluorescence Integration:

    • Map genomic occupancy of HIST1H2AG via ChIP-seq

    • Correlate with nuclear distribution patterns observed in IF microscopy

    • Identify chromatin domains with distinctive HIST1H2AG enrichment

  • Mass Spectrometry and Antibody-Based Detection:

ApproachInformation ProvidedIntegration Strategy
HIST1H2AG (Ab-9) AntibodySpatial localization, relative abundanceValidate MS findings with orthogonal method
Mass SpectrometryPTM landscape, protein interactionsIdentify modifications that may affect antibody binding
Proximity Labeling + MSProtein neighborhoodCorrelate with co-localization observed in IF
Cross-Linking MSDirect protein interactionsValidate with co-IP using HIST1H2AG (Ab-9) Antibody
  • Computational Analysis Methods:

    • Apply machine learning approaches to identify patterns across multi-omics datasets

    • Utilize dimension reduction techniques (PCA, t-SNE) to visualize relationships

    • Implement network analysis to position HIST1H2AG in broader epigenetic regulatory networks

    • Develop predictive models of histone variant function based on integrated datasets

  • Functional Validation Strategies:

    • Design targeted experiments to test hypotheses generated from data integration

    • Apply CRISPR-Cas9 editing to modify HIST1H2AG and observe system-wide effects

    • Use HIST1H2AG (Ab-9) Antibody to monitor protein changes following perturbations

This integrative approach has been successfully applied in cancer research contexts, where histone variant expression and modification patterns provide critical insights into disease mechanisms. By systematically connecting antibody-based observations with other molecular datasets, researchers can develop comprehensive models of HIST1H2AG function in normal biology and disease states.

How does HIST1H2AG (Ab-9) Antibody compare with other antibodies targeting different histone H2A variants?

Understanding the relative performance and specificity of HIST1H2AG (Ab-9) Antibody compared to other histone H2A variant antibodies is essential for experimental design and data interpretation:

Comparative Analysis of H2A Variant Antibodies:

AntibodyTarget EpitopeSpecificity ProfileOptimal ApplicationsLimitations
HIST1H2AG (Ab-9)Region around Lys-9Specific for human H2A.1WB, IHC, IF, ELISA Limited cross-species reactivity
HIST1H2AG (Ab-29)Region around di-methyl-Arg-29Targets modified H2AELISA, WB, IHC, IF May be affected by arginine methylation state
HIST1H2AG (Ab-36)Region around Lys-36Human H2A.1 specificELISA, IHC, IF Not validated for Western blot
H2A.Z AntibodiesH2A.Z-specific regionsDistinguish H2A.Z from canonical H2AAll common applicationsMay not differentiate H2A.Z.1 from H2A.Z.2
H2A.X AntibodiesC-terminal region or phospho-Ser139Highly specific for H2A.XDNA damage studiesγH2A.X antibodies only detect phosphorylated form

Performance in Different Applications:

  • Western Blot Comparison:

    • HIST1H2AG (Ab-9) provides clean bands at ~14 kDa in human cell lysates

    • Pan-H2A antibodies typically show stronger signal but less variant specificity

    • Phospho-specific H2A antibodies require specific stimulation conditions

  • Immunohistochemistry Performance:

    • HIST1H2AG (Ab-9) demonstrates strong nuclear staining in human tissues with recommended dilutions of 1:20-200

    • H2A.X antibodies often show punctate nuclear staining at DNA damage sites

    • Canonical H2A antibodies typically show more uniform nuclear staining

  • ChIP Application Effectiveness:

    • H2A.Z antibodies generally show enrichment at promoters and enhancers

    • HIST1H2AG (Ab-9) can be adapted for ChIP with proper optimization

    • Phospho-H2A.X antibodies specifically enrich for DNA damage sites

When designing experiments requiring multiple histone variant detection, researchers should consider sequential staining approaches rather than simultaneous multiplexing when antibodies share host species. Cross-validation with multiple antibodies targeting different epitopes of the same variant provides increased confidence in experimental findings.

What is the significance of studying HIST1H2AG in cancer and other disease contexts?

HIST1H2AG and its post-translational modifications play crucial roles in disease processes, particularly in cancer biology. Understanding these connections provides important context for research applications of HIST1H2AG (Ab-9) Antibody:

HIST1H2AG in Cancer Biology:

  • Altered Expression Patterns:

    • Several cancer types show dysregulated expression of histone H2A variants

    • Immunohistochemistry with HIST1H2AG (Ab-9) Antibody has revealed distinctive staining patterns in human glioma tissue

    • Changes in histone variant incorporation affect chromatin stability and gene expression

  • Epigenetic Dysregulation Mechanisms:

    • Cancer-specific histone modifications can be detected with modification-specific antibodies

    • Altered distribution of histone variants contributes to genomic instability

    • Changes in HIST1H2AG incorporation may affect DNA damage response pathways

  • Prognostic and Diagnostic Implications:

    • Histone variant patterns correlate with clinical outcomes in several cancer types

    • Immunohistochemical analysis using HIST1H2AG (Ab-9) Antibody may reveal clinically relevant subtypes

    • Multi-marker panels including histone variants improve diagnostic accuracy

Research Applications in Disease Models:

  • Neurodegenerative Diseases:

    • Altered histone dynamics are implicated in neurodegeneration

    • HIST1H2AG (Ab-9) Antibody can be used to assess nuclear architecture changes

    • Compare with disease-specific protein markers for mechanistic insights

  • Inflammatory Conditions:

    • Inflammation alters chromatin states in affected tissues

    • Histone variant incorporation changes during inflammatory responses

    • HIST1H2AG detection can be combined with inflammatory markers

  • Development and Regeneration:

    • Histone variant switching occurs during cellular differentiation

    • HIST1H2AG (Ab-9) Antibody can track chromatin changes during development

    • Understanding normal variant dynamics informs disease model interpretation

When applying HIST1H2AG (Ab-9) Antibody in disease research, researchers should implement appropriate controls and standardized scoring systems for accurate comparison between normal and pathological samples. The antibody's high specificity for human samples makes it particularly valuable for translational studies using clinical specimens, though this species restriction should be considered when designing animal model experiments.

How can researchers effectively combine HIST1H2AG (Ab-9) Antibody with emerging technologies in epigenetics research?

Integrating HIST1H2AG (Ab-9) Antibody with cutting-edge technologies creates powerful new approaches for investigating histone biology and epigenetic regulation:

Integration with Advanced Imaging Technologies:

  • Super-Resolution Microscopy:

    • Apply HIST1H2AG (Ab-9) Antibody (1:50-200 dilution) with STORM or STED microscopy

    • Resolve subnuclear distribution patterns below diffraction limit

    • Combine with DNA-PAINT for multiplexed histone variant mapping

    • Protocol adjustments:

      • Use directly conjugated antibodies when possible

      • Reduce fixation time to minimize epitope masking

      • Include drift correction beads for long acquisition protocols

  • Live-Cell Imaging Approaches:

    • Generate recombinant nanobodies based on HIST1H2AG (Ab-9) epitope recognition

    • Express fluorescent protein-tagged nanobodies for live tracking

    • Compare fixed and live patterns to identify potential fixation artifacts

Emerging Single-Cell Technologies:

  • Single-Cell Proteomics Integration:

    • Validate mass cytometry (CyTOF) detection of HIST1H2AG with antibody-based assays

    • Develop CITE-seq protocols incorporating HIST1H2AG detection

    • Correlate protein levels with single-cell transcriptomics data

  • Spatial Transcriptomics Combination:

    • Perform HIST1H2AG immunostaining followed by spatial transcriptomics

    • Correlate protein localization with spatial gene expression patterns

    • Identify transcriptional states associated with specific histone variant distributions

Advanced Functional Genomics Applications:

TechnologyIntegration ApproachResearch Application
CUT&Tag/CUT&RUNUse HIST1H2AG (Ab-9) Antibody for targeted chromatin profilingMap genomic distribution with higher signal-to-noise than ChIP
Proximity Labeling (BioID/APEX)Fuse proximity labeling enzymes to HIST1H2AG-interacting proteinsIdentify context-specific protein interactions
CRISPR Epigenome EditingTarget epigenetic modifiers to HIST1H2AG-enriched regionsInvestigate causal relationships between variant incorporation and gene regulation
Liquid Chromatin Mass SpectrometryValidate MS-identified HIST1H2AG PTMs with antibody-based methodsCreate comprehensive maps of modification crosstalk

Implementation Considerations:

  • Validate antibody performance in each new technological context

  • Develop appropriate controls specific to the combined method

  • Consider epitope accessibility limitations in complex protocols

  • Optimize fixation and permeabilization specifically for each technology

  • Benchmark against established methods before fully transitioning to novel approaches

By strategically integrating HIST1H2AG (Ab-9) Antibody with these emerging technologies, researchers can develop more comprehensive understanding of histone variant biology while maximizing the utility of established antibody-based detection methods.

What are the key considerations for selecting and validating HIST1H2AG (Ab-9) Antibody for specific research applications?

Selecting and validating HIST1H2AG (Ab-9) Antibody for specific research applications requires careful consideration of multiple factors to ensure experimental success. When evaluating this antibody for your research, prioritize these key considerations:

First, match the antibody specifications to your experimental needs by reviewing the validated applications. The HIST1H2AG (Ab-9) Antibody has been specifically validated for Western blot, immunohistochemistry, immunofluorescence, and ELISA applications . For each application, apply the recommended dilution ranges: 1:500-5000 for Western blot, 1:20-200 for immunohistochemistry, and 1:50-200 for immunofluorescence . These ranges provide starting points that should be optimized for your specific experimental system.

Second, implement comprehensive validation strategies appropriate to your research context. This should include positive controls (such as 293 cells or HeLa cells known to express the target) , negative controls (such as antibody omission or isotype controls), and whenever possible, peptide competition assays to confirm specificity. For critical applications, consider orthogonal validation with independent techniques or alternative antibodies targeting different epitopes of the same protein.

Third, understand the target epitope characteristics and potential limitations. The HIST1H2AG (Ab-9) Antibody targets the region surrounding Lysine 9 of human Histone H2A type 1 . This site can undergo post-translational modifications that may affect antibody binding, and researchers should consider this when interpreting results, particularly in contexts where histone modifications are dynamically regulated. Additionally, the antibody shows human-specific reactivity, which limits its application in cross-species comparisons.

By systematically addressing these considerations, researchers can maximize the utility of HIST1H2AG (Ab-9) Antibody while ensuring the reliability and reproducibility of their experimental results.

What future directions in histone research might benefit from applications of HIST1H2AG (Ab-9) Antibody?

The field of histone research continues to evolve rapidly, with several emerging areas that could particularly benefit from applications of HIST1H2AG (Ab-9) Antibody. These future directions represent opportunities for researchers to make significant contributions using this specialized reagent:

Single-cell epigenomics represents a frontier where HIST1H2AG (Ab-9) Antibody could provide valuable insights. As technologies for analyzing individual cells advance, there is growing interest in understanding how histone variant distributions vary between cells within tissues. The antibody's validated performance in immunofluorescence applications positions it well for adaptation to single-cell protein profiling techniques, potentially revealing heterogeneity in histone variant incorporation that bulk analysis would miss.

The intersection of histone biology with liquid-liquid phase separation is another exciting area for exploration. Recent research suggests that histone variants and their modifications influence the formation and properties of nuclear condensates. HIST1H2AG (Ab-9) Antibody could be employed in high-resolution microscopy studies to investigate how this specific histone variant contributes to phase separation phenomena and chromatin compartmentalization.

Chromatin dynamics during cellular stress responses also presents compelling research opportunities. The antibody could be used to track changes in HIST1H2AG distribution and modification state following various cellular stressors, including oxidative stress, DNA damage, and metabolic perturbation. This approach could reveal stress-specific chromatin reorganization patterns and identify potential therapeutic targets for conditions involving dysregulated stress responses.

Additionally, the role of histone variants in 3D genome organization remains incompletely understood. Combining HIST1H2AG (Ab-9) Antibody with chromosome conformation capture technologies could illuminate how this variant contributes to higher-order chromatin structure and topologically associating domain formation. Such studies would bridge the gap between molecular-level histone biology and genome-wide architectural principles.

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